| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is yeaC [H]
Identifier: 126174274
GI number: 126174274
Start: 2378860
End: 2379141
Strand: Direct
Name: yeaC [H]
Synonym: Sbal_2053
Alternate gene names: 126174274
Gene position: 2378860-2379141 (Clockwise)
Preceding gene: 126174273
Following gene: 126174277
Centisome position: 46.4
GC content: 45.04
Gene sequence:
>282_bases ATGACAGATATTAATCAAGTGATCGATCAAATGCCCATTGAAGTCTATGAAAGGCTTCGTAGTGCAGCAGAACTGGGTAA GTGGGAAGATGGCACTGTGTTAAGTGAAGTGCAGCGTGAATCGACCCTGCAGGTCGTGATGTTGTATCAAGCTCGTAAGC TGGAGCAAACTGAGCATTTCACTATTGCGCCTGACGGCAAAATCAATGAATTGTCTACAGCCGAGCTGAAAAAGCAATTC CGCGGTGAGCCGATTGCTGAGTTTAAAGTGCAGGATTTATAA
Upstream 100 bases:
>100_bases AAGGTATGCGGGCGAATATCGCTGGAATATGCTTTGTGTTTGGTTTTGTGGGTTATCTCATCACACGAGTCAGAATCGTG TTACATAAGCGGAAAAGTGT
Downstream 100 bases:
>100_bases ATTACTCACTGACTTCAAGGTGGTTTGTGTTTGCTAAGATGTTAGGTGAGGGTTTGCCGTTTATGTGACGTTAATATTGA TTTAGTATCAAATAACTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTDINQVIDQMPIEVYERLRSAAELGKWEDGTVLSEVQRESTLQVVMLYQARKLEQTEHFTIAPDGKINELSTAELKKQF RGEPIAEFKVQDL
Sequences:
>Translated_93_residues MTDINQVIDQMPIEVYERLRSAAELGKWEDGTVLSEVQRESTLQVVMLYQARKLEQTEHFTIAPDGKINELSTAELKKQF RGEPIAEFKVQDL >Mature_92_residues TDINQVIDQMPIEVYERLRSAAELGKWEDGTVLSEVQRESTLQVVMLYQARKLEQTEHFTIAPDGKINELSTAELKKQFR GEPIAEFKVQDL
Specific function: Unknown
COG id: COG3139
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081972, Length=89, Percent_Identity=44.9438202247191, Blast_Score=80, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009749 [H]
Pfam domain/function: PF07023 DUF1315 [H]
EC number: NA
Molecular weight: Translated: 10723; Mature: 10592
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDINQVIDQMPIEVYERLRSAAELGKWEDGTVLSEVQRESTLQVVMLYQARKLEQTEHF CCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE TIAPDGKINELSTAELKKQFRGEPIAEFKVQDL EECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TDINQVIDQMPIEVYERLRSAAELGKWEDGTVLSEVQRESTLQVVMLYQARKLEQTEHF CCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE TIAPDGKINELSTAELKKQFRGEPIAEFKVQDL EECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]