| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174272
Identifier: 126174272
GI number: 126174272
Start: 2377406
End: 2378533
Strand: Direct
Name: 126174272
Synonym: Sbal_2051
Alternate gene names: NA
Gene position: 2377406-2378533 (Clockwise)
Preceding gene: 126174271
Following gene: 126174273
Centisome position: 46.37
GC content: 47.34
Gene sequence:
>1128_bases ATGCGGATCAGTGCCAACTTTGATGGCGGAAATATCCAAGTCGTCAATCTTGATAATAAAGACGATATTCAACTTGCTAT TCGTCCCGATGCGGGCGGCGAGTTTTATCAATGGTTCAATTTTCGATTCGAAGGTGAGGTGGGTAACCATTACACCTTAA ATATCATCAACGCGGGGACGGCTTCCTATACCAAGGGATGGGAAGACTATCAGGCAGTAGCCAGTTACGACCGTCAACAT TGGTTCCGTATTCCTACACAGTACAAAGACGGCAAACTGAGCATTAGCTTAGAGCTCGATTGCGATGCGATTCAAATCGC TTACTTTGCGCCATACAGCTATGAGCGTCATTTAGATTTACTCAGCGGCGCCCAGTTACACCCAGATGTCAATTTAGAGC ATTTGGGCCTGACCTTAGATGGCCGCGATATTACCCTGATGAAAGTAGGGAATGGCGATGCATCTAAGCGAAATATTTGG ATCACCGCCAGACAACATCCGGGTGAAACCATGGCTGAATGGTTAGTCGAAGGTCTCGTGAATCGTTTACTCGATAATGA CTGCCCCACGGCGAAAGCGCTGCTCGATAAAGCCAATTTCTATATAGTGCCGAACATGAATCCCGATGGCAGTGTCAGAG GCCATCTGCGCACCAATGCGATTGGGATCAATCTTAACCGCGAGTGGCAAACGCCAAGTTTAGAAAAGAGCCCTGAGGTG TACCACGTCGTCAACAAGATGCAGCAAACTGGTGTCGACTTGTTCTATGATGTCCATGGTGATGAAGGCTTACCTTATGT GTTTCTCGCAGGTTGTGAGGGCGTGCCTGCCTACAATGATAAGCTGGCGCAGCTGCAAGTGGACTTCAGTCAAGCATTAA CCTTAGCCAGTGCTGATTTTCAAACTCAGTTTGGCTATGACAAAGACGAGCCAGGCCAAGCGAATCTAACGGTTGCTTCT AATTGGGTCGCTCAGACCTTCGAGTGTTTATCCAATACCCTCGAAATGCCTTTTAAAGACAATAACAATCTGGCCGATCC TTTTGTGGGTTGGTCGCCAGAGCGCAGTATTTATTTAGGTGAAGCATCGCTTATCGCCATGCTCGCCGTTGTTGATAAAT TACGTTAG
Upstream 100 bases:
>100_bases GTTTTGGTTTATCCTATCGGCCATATAATAAAATGTGCCGCGTGCTATCAGTCGCGTGCCATTAACAGCCCTTAGCTTTA ACAACCTATTAGGAATCATT
Downstream 100 bases:
>100_bases GGCGAGGCTGATATGGCATTAATTGAATGTCCAGTGTGTCGCAAGCGGATGTCGAGTAAGGCGCCTGTATGTCCCCATTG TCAAGCGAGCACCAATGGTG
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGTASYTKGWEDYQAVASYDRQH WFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDLLSGAQLHPDVNLEHLGLTLDGRDITLMKVGNGDASKRNIW ITARQHPGETMAEWLVEGLVNRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQVDFSQALTLASADFQTQFGYDKDEPGQANLTVAS NWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLGEASLIAMLAVVDKLR
Sequences:
>Translated_375_residues MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGTASYTKGWEDYQAVASYDRQH WFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDLLSGAQLHPDVNLEHLGLTLDGRDITLMKVGNGDASKRNIW ITARQHPGETMAEWLVEGLVNRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQVDFSQALTLASADFQTQFGYDKDEPGQANLTVAS NWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLGEASLIAMLAVVDKLR >Mature_375_residues MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGTASYTKGWEDYQAVASYDRQH WFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDLLSGAQLHPDVNLEHLGLTLDGRDITLMKVGNGDASKRNIW ITARQHPGETMAEWLVEGLVNRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQVDFSQALTLASADFQTQFGYDKDEPGQANLTVAS NWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLGEASLIAMLAVVDKLR
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI170763513, Length=322, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI222352158, Length=308, Percent_Identity=28.5714285714286, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI190194403, Length=300, Percent_Identity=29.3333333333333, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI120444924, Length=328, Percent_Identity=27.4390243902439, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI31657119, Length=306, Percent_Identity=27.7777777777778, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI78482633, Length=288, Percent_Identity=26.7361111111111, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI118421091, Length=289, Percent_Identity=26.9896193771626, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI115533904, Length=368, Percent_Identity=27.7173913043478, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI193202888, Length=281, Percent_Identity=25.2669039145907, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641847, Length=244, Percent_Identity=29.9180327868852, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI28571179, Length=244, Percent_Identity=29.9180327868852, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI161077807, Length=244, Percent_Identity=29.9180327868852, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI24641845, Length=244, Percent_Identity=29.9180327868852, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24651466, Length=316, Percent_Identity=26.8987341772152, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42098; Mature: 42098
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGT CEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEECCC ASYTKGWEDYQAVASYDRQHWFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDL CCCCCCHHHHHHHHHHCCHHEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHH LSGAQLHPDVNLEHLGLTLDGRDITLMKVGNGDASKRNIWITARQHPGETMAEWLVEGLV HCCCEECCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHH NRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV HHHHCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQVDFSQALTLASADF HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHEEECCCC QTQFGYDKDEPGQANLTVASNWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLG HHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC EASLIAMLAVVDKLR CHHHHHHHHHHHHCC >Mature Secondary Structure MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGT CEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEECCC ASYTKGWEDYQAVASYDRQHWFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDL CCCCCCHHHHHHHHHHCCHHEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHH LSGAQLHPDVNLEHLGLTLDGRDITLMKVGNGDASKRNIWITARQHPGETMAEWLVEGLV HCCCEECCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHH NRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV HHHHCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQVDFSQALTLASADF HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHEEECCCC QTQFGYDKDEPGQANLTVASNWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLG HHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC EASLIAMLAVVDKLR CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]