Click here to switch to the map view.

The map label for this gene is yejH [H]

Identifier: 126173980

GI number: 126173980

Start: 2036508

End: 2038262

Strand: Reverse

Name: yejH [H]

Synonym: Sbal_1751

Alternate gene names: 126173980

Gene position: 2038262-2036508 (Counterclockwise)

Preceding gene: 126173981

Following gene: 126173979

Centisome position: 39.75

GC content: 49.69

Gene sequence:

>1755_bases
GTGTCAGTCAAACTCAGAGACTATCAACAGCAAGCGGTTAATGCCGCCATCGCCCATTTTAGGCAAAGCCAAGCTTCCGC
CGTACTCGTATTGCCCACAGGCGCCGGCAAAAGCATAGTGATCGCCGAACTGGCGCGCATCGCAAAAGGCAGAGTCTTAG
TACTCACCCACGTGAAAGAATTAGTCGCGCAAAATGCTGAGAAAGTCGGCCTACTCACGGCACAAGCCAGTATCTATGCG
GCGGGGTTGAATCAAAAAGCCACTGAGGGGAAAACAGTCGTCGCCAGCATTCAATCGGCGGCACGGGGGTTAATACAGTT
CGACCAGCCGTTCTCGCTAGTGATTATTGATGAATGCCACAGAGTCAGCCTTGAGAAAACCAGCCAGTATCAACAAGTAC
TCAATCATTTACGCACGAAAAATCCCCAATTAAGATTGCTCGGCCTCACCGCCACGCCCTATCGCCTTGGCACTGGCTGG
ATTTACCAGCAGCACTATCACGGCAAAGTAGGATCTCCCGAACATGCAGTGTTCGAACATTGTGTGTTCGAGCTACCCAT
CAGGCCACTCATTAAGCAAGGTTACCTCACAGCGCCAACGCTGTTTGATGGCCTCAGTGCCCAGTACGATTTCAGCCAAC
TCAAAGCGAACGACAATGGCGAGTATGCTGAAGCTGAGGTTAACGATTTGCTGGGGCATTACGGCCGCGCGACCACAGCG
ATAGTGAAACAGCTCATTGAACTGAGCCAACATAGAAAAGGCATTATCATCTTTGCGGCAACGGTGCGCCACGCCAATGA
GATTTTTGGCCTACTCAACCAAGTTCACACTGCACAGAGCGCCATAATCACGGCACAAACGCACGACAATGAACGTGACG
CGACAATCGAACGTTTTAAAGCCCAAGAGCTCAAGTTTTTAGTCAACGTGGCAGTGTTGACGACAGGCTTCGACGCGCCC
CATGTGGATTTGATTGCGATTTTGCGCCCAACCGCCTCAGTCAGTCTATTTCAACAAATGATCGGCCGTGGGTTGCGAAT
CGCTGAAGGCAAAAAAGATTGTCTTATCATCGACTATGCTGCCAATGGTTATGACTTGTATTTCCCCGAGGTCGGCCAAG
CTAAACCCAACAGTAAATCGGTACCCGTGCAAGTGCATTGCCCAGTATGTGATTTTGCCAATATTTTCTGGGGACTCACG
GACGACGATGGCGACATCATCGAACACTTTGGTCGCCGTTGTCAGGGCATAGTCGAACAGCATGGTAAAAAGCAGCAGTG
CGACTTTCGATTTAGATCTAAATCTTGCCCTGATTGCGGTGAAGAGAATGATATTGCCGCGCGCATTTGCCAGCACTGCC
AATCGACTCTCATCGATCCCGATAAACGCCTGCGCCAAGTGCTCAGTCAGCAGCACCATCATTTGTTCCGCTGCCAACAT
ATGACGCTCATCGACGATGACGGTAATCTGAAAGTGCAATACCTCGATATCGACGGCAATGAATTTAATCGCCGCTTTAA
ATTGCAAACTCCGGCACAGTGGCGAGCCCTCTATGCCTTATTCATCTTTCCCCATAGCCGAATGCCGGGATTAAAACCGA
AAAAGTACACTAAGGTGACAGAGTTAATCAGCGACGCGGATAAATTCCGCATGCCCGATCTCTTGCTACTGAAGAAACAT
AAAAAAGGCTGGGATCTGCTCGAAAGCTATTTTGATTATCAAGGCCGCTATCAAACTGAAAATAAACTCGGCTGA

Upstream 100 bases:

>100_bases
GCTCCTTTCTCTAGCTTGCCCCTCCAACCAGGGGCATTTTTTTTGCCTGTTATGTTAAGCTTGCGACCTCACTTTTATTC
AGCATAGATTTTTTATCAGC

Downstream 100 bases:

>100_bases
CATTATCAATTCACTTAGGCCTATGGTATAAAACGACTAAAGTAATCCTAAGGAGCTATTATGTTCGTTGTTATTTTTGG
CCGTCCAGGCTGTCCTTATT

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELVAQNAEKVGLLTAQASIYA
AGLNQKATEGKTVVASIQSAARGLIQFDQPFSLVIIDECHRVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGW
IYQQHYHGKVGSPEHAVFEHCVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANDNGEYAEAEVNDLLGHYGRATTA
IVKQLIELSQHRKGIIIFAATVRHANEIFGLLNQVHTAQSAIITAQTHDNERDATIERFKAQELKFLVNVAVLTTGFDAP
HVDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLT
DDDGDIIEHFGRRCQGIVEQHGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSQQHHHLFRCQH
MTLIDDDGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFPHSRMPGLKPKKYTKVTELISDADKFRMPDLLLLKKH
KKGWDLLESYFDYQGRYQTENKLG

Sequences:

>Translated_584_residues
MSVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELVAQNAEKVGLLTAQASIYA
AGLNQKATEGKTVVASIQSAARGLIQFDQPFSLVIIDECHRVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGW
IYQQHYHGKVGSPEHAVFEHCVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANDNGEYAEAEVNDLLGHYGRATTA
IVKQLIELSQHRKGIIIFAATVRHANEIFGLLNQVHTAQSAIITAQTHDNERDATIERFKAQELKFLVNVAVLTTGFDAP
HVDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLT
DDDGDIIEHFGRRCQGIVEQHGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSQQHHHLFRCQH
MTLIDDDGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFPHSRMPGLKPKKYTKVTELISDADKFRMPDLLLLKKH
KKGWDLLESYFDYQGRYQTENKLG
>Mature_583_residues
SVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELVAQNAEKVGLLTAQASIYAA
GLNQKATEGKTVVASIQSAARGLIQFDQPFSLVIIDECHRVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGWI
YQQHYHGKVGSPEHAVFEHCVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANDNGEYAEAEVNDLLGHYGRATTAI
VKQLIELSQHRKGIIIFAATVRHANEIFGLLNQVHTAQSAIITAQTHDNERDATIERFKAQELKFLVNVAVLTTGFDAPH
VDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYAANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTD
DDGDIIEHFGRRCQGIVEQHGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSQQHHHLFRCQHM
TLIDDDGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFPHSRMPGLKPKKYTKVTELISDADKFRMPDLLLLKKHK
KGWDLLESYFDYQGRYQTENKLG

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=588, Percent_Identity=54.7619047619048, Blast_Score=645, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320539, Length=372, Percent_Identity=26.6129032258064, Blast_Score=124, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 65749; Mature: 65618

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKE
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHH
LVAQNAEKVGLLTAQASIYAAGLNQKATEGKTVVASIQSAARGLIQFDQPFSLVIIDECH
HHHCCCHHHEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEECCCC
RVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGWIYQQHYHGKVGSPEHAVFEH
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCCCEEEEEECCCCCCCCHHHHHHH
CVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANDNGEYAEAEVNDLLGHYGRATTA
HHHHCCCHHHHHCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH
IVKQLIELSQHRKGIIIFAATVRHANEIFGLLNQVHTAQSAIITAQTHDNERDATIERFK
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
AQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYA
HHHHHHHHHHHHEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCEEEEEEC
ANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTDDDGDIIEHFGRRCQGIVEQ
CCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
HGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSQQHHHLFRCQH
CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCE
MTLIDDDGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFPHSRMPGLKPKKYTKVT
EEEEECCCCEEEEEEECCCCCCCCEEEECCCHHHHHEEEEEEECCCCCCCCCCHHHHHHH
ELISDADKFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKLG
HHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKE
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHH
LVAQNAEKVGLLTAQASIYAAGLNQKATEGKTVVASIQSAARGLIQFDQPFSLVIIDECH
HHHCCCHHHEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEECCCC
RVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGWIYQQHYHGKVGSPEHAVFEH
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCCCEEEEEECCCCCCCCHHHHHHH
CVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANDNGEYAEAEVNDLLGHYGRATTA
HHHHCCCHHHHHCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH
IVKQLIELSQHRKGIIIFAATVRHANEIFGLLNQVHTAQSAIITAQTHDNERDATIERFK
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
AQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYA
HHHHHHHHHHHHEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCEEEEEEC
ANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTDDDGDIIEHFGRRCQGIVEQ
CCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
HGKKQQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSQQHHHLFRCQH
CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCE
MTLIDDDGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFPHSRMPGLKPKKYTKVT
EEEEECCCCEEEEEEECCCCCCCCEEEECCCHHHHHEEEEEEECCCCCCCCCCHHHHHHH
ELISDADKFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKLG
HHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]