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The map label for this gene is 126173813

Identifier: 126173813

GI number: 126173813

Start: 1838853

End: 1840355

Strand: Reverse

Name: 126173813

Synonym: Sbal_1579

Alternate gene names: NA

Gene position: 1840355-1838853 (Counterclockwise)

Preceding gene: 126173814

Following gene: 126173812

Centisome position: 35.89

GC content: 41.85

Gene sequence:

>1503_bases
GTGCCAGGTCATCGAATTACAGATCAACAAATAAGGCTATTTATGTCTAAACGAAAAGATCACCTTCAAGTTACTGCGGC
GAGCAAAGCTGGCATTTCGGAACGCTCTGCAAGACGAATTGAATCCGGCCAGCGACAATTAGGCCCATCAAAACCTCGAA
ACTACCGTACTCGTACCGACCCCCTAGAACTTGTATGGGACCCCGTCGTTTTACCACTCCTACAACTTTCTGACACTATT
ACTCCTGTTGGCGTGTTTGATTATCTTTGCGAAGAATATTCAGATGTTTTCGCTGTAACGCTAAGGCGAACCCTTGAACG
ACGAATTCAAAAATGGCGACAGATAAATGGCCAAGATAAAGAGGTTATTTTTCGCCAAGTTAAAGAATTCGGTCAGTTGG
GGATCATGGATTTCACTTGGGCGGATTTCATTGTCACGATTAGAGGAACAACTCTTAAGCATCGATTTTTTAACTATCGA
TTACCTGCAAGTGGTTGGAGTTACGTTCAAGTCGTATACGGCGGAGAAAGCTTCGTAGCTGTTGCTACAGGCTTACAAAA
TGCCTTTGAACAATCAAATGGTGTTCCACAGGAAGTCAGAACGGATAGCTTGAGCGCTGCTTATAAAAACCATTCCAACG
AAACATTATTTACTGAACGATTTTCAGAATTATCGATTCATTATGGTTTCAAACCTTCTAAAAATAACACCGGCATTGCC
CATGAAAATGGTGCCATTGAAAGCGCCAACAATCATCTAAAAAACCAAATCCGACAAGCTTTGGCTATTCGTGGTTCAAG
TGACTTTGATAGCATTGACGAGTATGAAACATTTATTGATGACGTCGTCCAAAGACGTAATCGCCGTATTATGGCACTTC
TCATCGATGAGCAACGACAATTACAACCCTTACCTAAATTTGAAAGTGTTAATTACGAAATTTACCCAGTAAAAGTATCG
AGCACCAGTACGTTTCAGTTAAAACGAGTGACTTATTCAGTACCATCCAGACTCGTCGGTGCAACATTGCGCGTGCATCT
TTTCGATAAAAAATTAGATATCTATTGCCATGGAGTGCACACCGCCACGCTCACTCGCGTACATGCGTCAGCAAATAATC
GCGGTCATCAAATTAATTATCGTCACTTAATCGGTGCACTGATGAAAAAACCTCGAGCATTCAGGGGGGGCCAATGGCGA
GACCAACTGCTTCCAAATGAAGACTATCGCCAAATATGGAAGAATGTCGATGCTCTACTAAGTGCTGATGAAGCAAGTCT
TTATATGGTTAGGTTACTCAATATCGCCAGTAAATCAGATCGTGAAGAAGCGGTAGGAAGATTCGTTCTCGAAGGGATAA
ATCTAGGGCAACGGCCAAACATAGTTGACTGTGAAGAACGTTTTTTAAAAGACGAAGAGTGGGAATTTAACCCTAAAGTA
CAACAACATAGCTTAGCGTCTTATCAGCAAATTCTTGACGAGGTGAATGAATATGTCAGTTGA

Upstream 100 bases:

>100_bases
GCAAGGCTATTGCGCGACAATTACCCTGACCGGTTCAGCGACAATTAGAATGGCCGGTTGATCTGATACATTCTGGACAA
AGATTCTAAGGGAGTTCTTT

Downstream 100 bases:

>100_bases
AACGTTGCCTATTATTCTCAAAGAGCTTCGACTAGTGAGCTTACTTCCACATTGGCAACCGTTGGCTGAGAAAGCACGAG
AGCAGCATTGGCCGGTGGAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MPGHRITDQQIRLFMSKRKDHLQVTAASKAGISERSARRIESGQRQLGPSKPRNYRTRTDPLELVWDPVVLPLLQLSDTI
TPVGVFDYLCEEYSDVFAVTLRRTLERRIQKWRQINGQDKEVIFRQVKEFGQLGIMDFTWADFIVTIRGTTLKHRFFNYR
LPASGWSYVQVVYGGESFVAVATGLQNAFEQSNGVPQEVRTDSLSAAYKNHSNETLFTERFSELSIHYGFKPSKNNTGIA
HENGAIESANNHLKNQIRQALAIRGSSDFDSIDEYETFIDDVVQRRNRRIMALLIDEQRQLQPLPKFESVNYEIYPVKVS
STSTFQLKRVTYSVPSRLVGATLRVHLFDKKLDIYCHGVHTATLTRVHASANNRGHQINYRHLIGALMKKPRAFRGGQWR
DQLLPNEDYRQIWKNVDALLSADEASLYMVRLLNIASKSDREEAVGRFVLEGINLGQRPNIVDCEERFLKDEEWEFNPKV
QQHSLASYQQILDEVNEYVS

Sequences:

>Translated_500_residues
MPGHRITDQQIRLFMSKRKDHLQVTAASKAGISERSARRIESGQRQLGPSKPRNYRTRTDPLELVWDPVVLPLLQLSDTI
TPVGVFDYLCEEYSDVFAVTLRRTLERRIQKWRQINGQDKEVIFRQVKEFGQLGIMDFTWADFIVTIRGTTLKHRFFNYR
LPASGWSYVQVVYGGESFVAVATGLQNAFEQSNGVPQEVRTDSLSAAYKNHSNETLFTERFSELSIHYGFKPSKNNTGIA
HENGAIESANNHLKNQIRQALAIRGSSDFDSIDEYETFIDDVVQRRNRRIMALLIDEQRQLQPLPKFESVNYEIYPVKVS
STSTFQLKRVTYSVPSRLVGATLRVHLFDKKLDIYCHGVHTATLTRVHASANNRGHQINYRHLIGALMKKPRAFRGGQWR
DQLLPNEDYRQIWKNVDALLSADEASLYMVRLLNIASKSDREEAVGRFVLEGINLGQRPNIVDCEERFLKDEEWEFNPKV
QQHSLASYQQILDEVNEYVS
>Mature_499_residues
PGHRITDQQIRLFMSKRKDHLQVTAASKAGISERSARRIESGQRQLGPSKPRNYRTRTDPLELVWDPVVLPLLQLSDTIT
PVGVFDYLCEEYSDVFAVTLRRTLERRIQKWRQINGQDKEVIFRQVKEFGQLGIMDFTWADFIVTIRGTTLKHRFFNYRL
PASGWSYVQVVYGGESFVAVATGLQNAFEQSNGVPQEVRTDSLSAAYKNHSNETLFTERFSELSIHYGFKPSKNNTGIAH
ENGAIESANNHLKNQIRQALAIRGSSDFDSIDEYETFIDDVVQRRNRRIMALLIDEQRQLQPLPKFESVNYEIYPVKVSS
TSTFQLKRVTYSVPSRLVGATLRVHLFDKKLDIYCHGVHTATLTRVHASANNRGHQINYRHLIGALMKKPRAFRGGQWRD
QLLPNEDYRQIWKNVDALLSADEASLYMVRLLNIASKSDREEAVGRFVLEGINLGQRPNIVDCEERFLKDEEWEFNPKVQ
QHSLASYQQILDEVNEYVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57643; Mature: 57512

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGHRITDQQIRLFMSKRKDHLQVTAASKAGISERSARRIESGQRQLGPSKPRNYRTRTD
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLELVWDPVVLPLLQLSDTITPVGVFDYLCEEYSDVFAVTLRRTLERRIQKWRQINGQDK
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EVIFRQVKEFGQLGIMDFTWADFIVTIRGTTLKHRFFNYRLPASGWSYVQVVYGGESFVA
HHHHHHHHHHHCCCCCEEEHHHEEEEEECCEEEHHHEEEECCCCCCCEEEEEECCCCHHH
VATGLQNAFEQSNGVPQEVRTDSLSAAYKNHSNETLFTERFSELSIHYGFKPSKNNTGIA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCCCCCCCCCCE
HENGAIESANNHLKNQIRQALAIRGSSDFDSIDEYETFIDDVVQRRNRRIMALLIDEQRQ
ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHH
LQPLPKFESVNYEIYPVKVSSTSTFQLKRVTYSVPSRLVGATLRVHLFDKKLDIYCHGVH
CCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHEEEEEEEECCEEEEEECEE
TATLTRVHASANNRGHQINYRHLIGALMKKPRAFRGGQWRDQLLPNEDYRQIWKNVDALL
HHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH
SADEASLYMVRLLNIASKSDREEAVGRFVLEGINLGQRPNIVDCEERFLKDEEWEFNPKV
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECHHHHHCCCCCCCCCCCH
QQHSLASYQQILDEVNEYVS
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGHRITDQQIRLFMSKRKDHLQVTAASKAGISERSARRIESGQRQLGPSKPRNYRTRTD
CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLELVWDPVVLPLLQLSDTITPVGVFDYLCEEYSDVFAVTLRRTLERRIQKWRQINGQDK
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EVIFRQVKEFGQLGIMDFTWADFIVTIRGTTLKHRFFNYRLPASGWSYVQVVYGGESFVA
HHHHHHHHHHHCCCCCEEEHHHEEEEEECCEEEHHHEEEECCCCCCCEEEEEECCCCHHH
VATGLQNAFEQSNGVPQEVRTDSLSAAYKNHSNETLFTERFSELSIHYGFKPSKNNTGIA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCCCCCCCCCCE
HENGAIESANNHLKNQIRQALAIRGSSDFDSIDEYETFIDDVVQRRNRRIMALLIDEQRQ
ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHH
LQPLPKFESVNYEIYPVKVSSTSTFQLKRVTYSVPSRLVGATLRVHLFDKKLDIYCHGVH
CCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHEEEEEEEECCEEEEEECEE
TATLTRVHASANNRGHQINYRHLIGALMKKPRAFRGGQWRDQLLPNEDYRQIWKNVDALL
HHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH
SADEASLYMVRLLNIASKSDREEAVGRFVLEGINLGQRPNIVDCEERFLKDEEWEFNPKV
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECHHHHHCCCCCCCCCCCH
QQHSLASYQQILDEVNEYVS
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]