Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126173755
Identifier: 126173755
GI number: 126173755
Start: 1767847
End: 1768704
Strand: Reverse
Name: 126173755
Synonym: Sbal_1519
Alternate gene names: NA
Gene position: 1768704-1767847 (Counterclockwise)
Preceding gene: 126173764
Following gene: 126173754
Centisome position: 34.5
GC content: 52.1
Gene sequence:
>858_bases ATGAAGATCAAAAAAGCCCTCATGCTCTTGGGTCTGTTAGCTGTCAGCCCAGCGACATTAGCTGCAACCGGAGTTGCCTT TATCCACGGTACGGGTCACCAGACCAATGCCTTAGCCGATTACTGGACGCCCGAATTTGTTAACTCAGTGCGCCAAGGCA TCCCAGTGCCAAATAATTACACAGTGATCAACTGCGACTTTGACCAATATATGTGGGAAGAAAGCGCCGCAGGTTGTCTG GCGACCCAGCTCAATAGCTTTATCCAAGCCAAAAATATCGACGACTTAATTCTGCTGACCCACTCCAATGGTGGCAACGT AGTGCGGTGGATTTTATCTAACCCCACGTGGGACAGCCGTTATCCTGCGGTGATCAACGCCATCTCAAAGGTTATCGCCC TCGCCCCTTCCAGTGCTGGTACGCCGCTCGCCGATGCGGTGAACCAAGGTAATGTGTTCGAAACCAGCTTAGGCTGGCTC TTAGGCTATGGCAGCAATGCGGTGAAACAACAGCAAGTGGGTTGGATGGCAAACTACAACAACACTATGCTCTACGGCAC TGCGGGTCGCCCATCGTTGGGTAAACCCTTCGAAGTCGTGGTGGGCTCAGATGTTGATTCCGCCATTTGGGACAGCGACA GTTACTGCGCGGGTTATCAATACCAAGTCGCGCTCGAAACCACCCAAAACTGGCTCGATAGCTGCTCCGACGGCTTCTTA AATTGCAGCTCGCAAAAGGCAGCTGGCACAGTCTGGTTTACCGATAAACAAAAGACCCGTGGCCAAGAACCCCTAAGCCA TCAGCAGAGCCGCCGTGCGTGTTTCAATTTAGACACGCTGATCCGCAACCACATTTAA
Upstream 100 bases:
>100_bases CTAAATTACGGCAAATCCTTAGCATTAACCGATTTGCCCTAAACAGTCGCAACGGACTGCGCGGCCACTATCAACAAGAC CAACAACACGAGATATACCC
Downstream 100 bases:
>100_bases GGAGCACTAAGATGCACACACTCAGCAAACTTGCCAGTGTCTTGGCGCTAAGCGGACTGCTCGCAGCCTGCCAAGACGAA GCCACACCCATAGATCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNYTVINCDFDQYMWEESAAGCL ATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSRYPAVINAISKVIALAPSSAGTPLADAVNQGNVFETSLGWL LGYGSNAVKQQQVGWMANYNNTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI
Sequences:
>Translated_285_residues MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNYTVINCDFDQYMWEESAAGCL ATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSRYPAVINAISKVIALAPSSAGTPLADAVNQGNVFETSLGWL LGYGSNAVKQQQVGWMANYNNTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI >Mature_285_residues MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNYTVINCDFDQYMWEESAAGCL ATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSRYPAVINAISKVIALAPSSAGTPLADAVNQGNVFETSLGWL LGYGSNAVKQQQVGWMANYNNTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31093; Mature: 31093
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNY CCHHHHHHHHHHHHHCCHHHHHHCEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCCCE TVINCDFDQYMWEESAAGCLATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSR EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCC YPAVINAISKVIALAPSSAGTPLADAVNQGNVFETSLGWLLGYGSNAVKQQQVGWMANYN CHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEHHHHHHEECCCCHHHHHHCCEEECCC NTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL CEEEEECCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCC NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI CCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNY CCHHHHHHHHHHHHHCCHHHHHHCEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCCCE TVINCDFDQYMWEESAAGCLATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSR EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCC YPAVINAISKVIALAPSSAGTPLADAVNQGNVFETSLGWLLGYGSNAVKQQQVGWMANYN CHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEHHHHHHEECCCCHHHHHHCCEEECCC NTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL CEEEEECCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCC NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI CCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA