Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126173754
Identifier: 126173754
GI number: 126173754
Start: 1766507
End: 1767835
Strand: Reverse
Name: 126173754
Synonym: Sbal_1518
Alternate gene names: NA
Gene position: 1767835-1766507 (Counterclockwise)
Preceding gene: 126173755
Following gene: 126173753
Centisome position: 34.48
GC content: 53.35
Gene sequence:
>1329_bases ATGCACACACTCAGCAAACTTGCCAGTGTCTTGGCGCTAAGCGGACTGCTCGCAGCCTGCCAAGACGAAGCCACACCCAT AGATCCCAAAACCAATGCCAGCCCTATGTACGCCAAAGGGTTAACCCTAGCCGCGCCGAGCGATACCGATCTTGTCGATA GCAATATTGCCAGTCCAACACTGGCGCCCATTAACACCAGTACGGATTACATTAGCTTTATCACCCCTTTGTATGGCGAG TATCAGGCAAGCGCGCCGCAGCTTGAACAAGACAGCCAAAGTGACGAATATTGGGTCAATGTAACCGGCGCGCAGCTTAA TGCGGGCGTGGGCCTCACCATGAGCCAAGCATCGAGCCTAGTGCGCATTGCGCCTCGGGGCGATACCAGTTCTGGCGCCT TAATGCATGCAGAGGCTATCGCCCCTGAGCGCGTACAAATTCAGCGCGTTAGCCCTAATCAGTCACCCCAAGGCAAAGCG GCCAACAGCAGCGGGATAAACACCAATGAGTCATTGGTCAAATCGATGGCCAACGCCGATGCCCTTGCTAGCGCAGGATT AACCGATGATTCCAGCGCACTGCAAATGTCGGCGAAAGCCACACCGGGCCAATATCGCCTGCAGGTCAGTCAGCCGTTAA CGCCAAGCGCCAACTACTTAGTCAATGTGAAGGAAAAAGGCTCGCCCTATCAACTGAGTGTCAAAGCCTCCTCCGCTATC GCGGCTGATGCGCAAAACCTTGGGCTTGAACTCGCACTCAGCCAAAGTGATAACACCTTCGTGCCGCAGGCAACACTCAA GCAAGCCGATGGCGATATGCAACCACTGACGATGGTAAAACAAGGTGAGACATGGCAAGCGGTGATCCCCGCGGGCGTGG CACTTTCGAGCAGTAATGCGGGTTTCAGTGAAGTTGAAATTACAGTGCAAACCCAAGTCGATGGCCGTCCAGTGCAGCGC ACGGTCAAATCTGTCTTTAAGTCCTATGTCAATTCGGCGAGCATCAAGCCCGAAGTGCTCACGGTTTGGGATAAAGGTCT GCCTAACCAAATCAACTTTGAGTTATCGGTCGCCGAGGCGGGACGTTTTGGCTTAAGTGGCACGTTAACCGGCACCAATG CCGAAGGTCAAAAGGTGGCGATTCTACGTTCCCAAGCGGCTAATTGGCTGACCCCAGAGTCGCCAAAGTTAAAGCTGATG TTAGATCCTAAGCTCATCCAAGCCTCGGGTTTACAGCCGCCATTCGAACTCAATGAGTTAGAACTGCAAGATCAAGGGCA AATGGCCAGATTAAGCTATCAAGCCACGGCATTGATCTTAACCCGCTAA
Upstream 100 bases:
>100_bases AAAAGACCCGTGGCCAAGAACCCCTAAGCCATCAGCAGAGCCGCCGTGCGTGTTTCAATTTAGACACGCTGATCCGCAAC CACATTTAAGGAGCACTAAG
Downstream 100 bases:
>100_bases CATTAAGCTGCTGATATTAAGGGGCAGATAGAAGACGCGGGCTTTAAATGCCAATGTAAAACCAGAGGCGAGGCTAAAGT TAACCGGCCCAAGCTAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSDTDLVDSNIASPTLAPINTSTDYISFITPLYGE YQASAPQLEQDSQSDEYWVNVTGAQLNAGVGLTMSQASSLVRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKA ANSSGINTNESLVKSMANADALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI AADAQNLGLELALSQSDNTFVPQATLKQADGDMQPLTMVKQGETWQAVIPAGVALSSSNAGFSEVEITVQTQVDGRPVQR TVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEAGRFGLSGTLTGTNAEGQKVAILRSQAANWLTPESPKLKLM LDPKLIQASGLQPPFELNELELQDQGQMARLSYQATALILTR
Sequences:
>Translated_442_residues MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSDTDLVDSNIASPTLAPINTSTDYISFITPLYGE YQASAPQLEQDSQSDEYWVNVTGAQLNAGVGLTMSQASSLVRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKA ANSSGINTNESLVKSMANADALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI AADAQNLGLELALSQSDNTFVPQATLKQADGDMQPLTMVKQGETWQAVIPAGVALSSSNAGFSEVEITVQTQVDGRPVQR TVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEAGRFGLSGTLTGTNAEGQKVAILRSQAANWLTPESPKLKLM LDPKLIQASGLQPPFELNELELQDQGQMARLSYQATALILTR >Mature_442_residues MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSDTDLVDSNIASPTLAPINTSTDYISFITPLYGE YQASAPQLEQDSQSDEYWVNVTGAQLNAGVGLTMSQASSLVRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKA ANSSGINTNESLVKSMANADALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI AADAQNLGLELALSQSDNTFVPQATLKQADGDMQPLTMVKQGETWQAVIPAGVALSSSNAGFSEVEITVQTQVDGRPVQR TVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEAGRFGLSGTLTGTNAEGQKVAILRSQAANWLTPESPKLKLM LDPKLIQASGLQPPFELNELELQDQGQMARLSYQATALILTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46649; Mature: 46649
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSDTDLVDSNIASPT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCE LAPINTSTDYISFITPLYGEYQASAPQLEQDSQSDEYWVNVTGAQLNAGVGLTMSQASSL EECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCEEHHHCCCE VRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKAANSSGINTNESLVKSMANAD EEEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCHH ALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI HHHHCCCCCCCHHEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCH AADAQNLGLELALSQSDNTFVPQATLKQADGDMQPLTMVKQGETWQAVIPAGVALSSSNA HCCHHHCCEEEEEECCCCEECCCHHHHHCCCCCCCEEEEECCCCEEEEECCCEEEECCCC GFSEVEITVQTQVDGRPVQRTVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEA CCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC GRFGLSGTLTGTNAEGQKVAILRSQAANWLTPESPKLKLMLDPKLIQASGLQPPFELNEL CCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCE ELQDQGQMARLSYQATALILTR EECCCCCEEEEEEEEEEEEEEC >Mature Secondary Structure MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSDTDLVDSNIASPT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCE LAPINTSTDYISFITPLYGEYQASAPQLEQDSQSDEYWVNVTGAQLNAGVGLTMSQASSL EECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCEEHHHCCCE VRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKAANSSGINTNESLVKSMANAD EEEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCHH ALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI HHHHCCCCCCCHHEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCH AADAQNLGLELALSQSDNTFVPQATLKQADGDMQPLTMVKQGETWQAVIPAGVALSSSNA HCCHHHCCEEEEEECCCCEECCCHHHHHCCCCCCCEEEEECCCCEEEEECCCEEEECCCC GFSEVEITVQTQVDGRPVQRTVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEA CCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC GRFGLSGTLTGTNAEGQKVAILRSQAANWLTPESPKLKLMLDPKLIQASGLQPPFELNEL CCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCE ELQDQGQMARLSYQATALILTR EECCCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA