| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173634
Identifier: 126173634
GI number: 126173634
Start: 1605334
End: 1606047
Strand: Reverse
Name: 126173634
Synonym: Sbal_1396
Alternate gene names: NA
Gene position: 1606047-1605334 (Counterclockwise)
Preceding gene: 126173637
Following gene: 126173632
Centisome position: 31.32
GC content: 49.16
Gene sequence:
>714_bases ATGGCCACGCTCACGACTAAAATCCCCATTGCGACAGGTGCAACGTTCAGCGCCGCGAGTTTGCAATTTTTAAATCAACT GGCGCAAAACAACTCCCGCGACTGGTTTAAAGCCCATCAGGCGGAATACGAAGAGACTGTGCGAACCCCTGCGCTGCAGT TTATTGAGCAAATGCAGCCCAGTATCCTCGCCCTCTCGCCTCGGCTCACTGCCGTACCGAAAAAAGTCGGTGGCAGTCTT ATGCGTCCCCAACGAGACAGCCGTTTCAGCAAAGATAAAACGCCCTATAAAACCAATGTCGGTATTCAATTCCGCCATTT TCAGGGCAAAGACGTGCATGCGCCGGGACTGTACTTACACATTGCCGAAGATGGCTGTTTTATTGCCGCAGGGATTTGGC ACCCAGAATCGAAAGCCTTAAATGCCATTCGCACTTGCATCGATGAGAATCCCAACGGCTATAAAAAGGCACTACAAACC TTGCAGAGTCATGGATTTAACATGGACGGTGACAGCTTAACTCGACCACCAAAAGGGTTTGATAAAAACCACCCTATGCT GGCAGAACTAAAACGCAAAGATTTTATCGCCGTAAAAAATATCACCTTTGAAGAACTCTGCCGCCCAGATGCCGCCAGTT TCTGTGCCGAGCAATTTGCGCACTGTACTCAATTGATGGCCTATCTGTGTTTCGCGCTGGACTTGGATTTCTAG
Upstream 100 bases:
>100_bases GGAATATACGGGCGACTCACCTGACGTTCGCCCTGCTTGTATCTAGGCGCATCTAGGCTGTTGGCACTCGTTTCAAATGC ATTAATAAGGTTCACCGATA
Downstream 100 bases:
>100_bases ACAATAGACTTTTAACCAATTGATTTGTAAAAATAGACCGTTAAAAATAGATTGCTAAAAGCAAAATGGCCTAGACAAAA ATCTAGGCCATTAAAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MATLTTKIPIATGATFSAASLQFLNQLAQNNSRDWFKAHQAEYEETVRTPALQFIEQMQPSILALSPRLTAVPKKVGGSL MRPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIAEDGCFIAAGIWHPESKALNAIRTCIDENPNGYKKALQT LQSHGFNMDGDSLTRPPKGFDKNHPMLAELKRKDFIAVKNITFEELCRPDAASFCAEQFAHCTQLMAYLCFALDLDF
Sequences:
>Translated_237_residues MATLTTKIPIATGATFSAASLQFLNQLAQNNSRDWFKAHQAEYEETVRTPALQFIEQMQPSILALSPRLTAVPKKVGGSL MRPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIAEDGCFIAAGIWHPESKALNAIRTCIDENPNGYKKALQT LQSHGFNMDGDSLTRPPKGFDKNHPMLAELKRKDFIAVKNITFEELCRPDAASFCAEQFAHCTQLMAYLCFALDLDF >Mature_236_residues ATLTTKIPIATGATFSAASLQFLNQLAQNNSRDWFKAHQAEYEETVRTPALQFIEQMQPSILALSPRLTAVPKKVGGSLM RPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIAEDGCFIAAGIWHPESKALNAIRTCIDENPNGYKKALQTL QSHGFNMDGDSLTRPPKGFDKNHPMLAELKRKDFIAVKNITFEELCRPDAASFCAEQFAHCTQLMAYLCFALDLDF
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26581; Mature: 26449
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLTTKIPIATGATFSAASLQFLNQLAQNNSRDWFKAHQAEYEETVRTPALQFIEQMQP CCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SILALSPRLTAVPKKVGGSLMRPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLH CEEEECCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE IAEDGCFIAAGIWHPESKALNAIRTCIDENPNGYKKALQTLQSHGFNMDGDSLTRPPKGF EECCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC DKNHPMLAELKRKDFIAVKNITFEELCRPDAASFCAEQFAHCTQLMAYLCFALDLDF CCCCCHHHHHHHHCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATLTTKIPIATGATFSAASLQFLNQLAQNNSRDWFKAHQAEYEETVRTPALQFIEQMQP CCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SILALSPRLTAVPKKVGGSLMRPQRDSRFSKDKTPYKTNVGIQFRHFQGKDVHAPGLYLH CEEEECCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE IAEDGCFIAAGIWHPESKALNAIRTCIDENPNGYKKALQTLQSHGFNMDGDSLTRPPKGF EECCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC DKNHPMLAELKRKDFIAVKNITFEELCRPDAASFCAEQFAHCTQLMAYLCFALDLDF CCCCCHHHHHHHHCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA