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The map label for this gene is yjiF [H]

Identifier: 125624359

GI number: 125624359

Start: 1528112

End: 1529095

Strand: Reverse

Name: yjiF [H]

Synonym: llmg_1556

Alternate gene names: 125624359

Gene position: 1529095-1528112 (Counterclockwise)

Preceding gene: 125624360

Following gene: 125624358

Centisome position: 60.45

GC content: 38.72

Gene sequence:

>984_bases
ATGAGCAATCCTAAAGTTGTCGTTATCGGTGGTGGGACCGGAATTCCTGTCGTTCTAAAAGCATTACGTAAAGAAAAAGT
TGATTTAACAGCGATTGTAACCGTTGCGGATGATGGAGGTTCTTCTGGACGGATTCGTTCAGCAGTCAGTATCGCTCCTC
CTGGTGATTTGAGAAATGTATTGATTGCAATGTCAGACATGCCTAAATTTTATGCCGATATTTTACAGTATCGATTTGAT
AAATCTGATGGAGAATTGGCAGGACACCCTCTTGGGAATTTAATTATTGCCGCAATTTCTGAAATGCAAGGGTCAACCTA
TCGTGCGATTCAAACCTTGGCTCAATTCTTTCATGTTGAAGGGAAAATTTACCCTTCATCTGATGCAGCATTGACATTAC
ATGCCGTTTTTAAAGATAGTCATGAGGTAAGCGGTGAGAGCCAAATTGCAGGCTATAAAGGCTTGATTGACCATGTTTAC
CTGACTCAAACTGTCAATGGCGAAAGCCCAATTGCTTCACGAAATGTTGTTAAATCAATTATGGAAGCAGATACGATTGT
TTTGGGGCCGGGTTCACTTTTCACTTCAATTTTACCCAATATTGTTATTCCCGAAATCTGTGAAGCTTTATGGAAAACGT
CGGCTAAAATTATCTATGTTTGTAATATTATGACTCAACGTGGTGAAACAGAGCAATTCACGGATGCTGACCACGTTCGT
GTTTTGAATGAACATATTGGAACAAAAGTGATTGATACAGTTCTTGTGAATATTCAAGAAGTGCCAGAAGAATATATGAA
TACAAATAAATTTGATGAGTATTTGGTCCAAGTTGATCATGATTTTGCAGCATTGAAGGCTGAAGAAGTCAATGTGATTT
CTAATAATTTTCTGGAACTGCGTGATGGTGGGGCCTTCCATAATGGAGAAGCTGTTGCCAAAGAAATTGTTGCCATTTCT
CAACGTCAAGAATTTAGACATTAA

Upstream 100 bases:

>100_bases
TGGCCTTTGCTGAACGAGTTTCTGCTGCTTTAAGAGAAAAGTGGCATCTAAATGTTAGTCATAGAGATAAAGACCGTAGA
AAGGAAACGGTAAATCGTTC

Downstream 100 bases:

>100_bases
AAAATTACTGACAGGATTTGTCAGTAATTTTAAACGGATAAAGAGTTTAAGAGGAAGGAACAAGACAGGGTTTTTTAACC
TGAATAGAAAAAATTATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSNPKVVVIGGGTGIPVVLKALRKEKVDLTAIVTVADDGGSSGRIRSAVSIAPPGDLRNVLIAMSDMPKFYADILQYRFD
KSDGELAGHPLGNLIIAAISEMQGSTYRAIQTLAQFFHVEGKIYPSSDAALTLHAVFKDSHEVSGESQIAGYKGLIDHVY
LTQTVNGESPIASRNVVKSIMEADTIVLGPGSLFTSILPNIVIPEICEALWKTSAKIIYVCNIMTQRGETEQFTDADHVR
VLNEHIGTKVIDTVLVNIQEVPEEYMNTNKFDEYLVQVDHDFAALKAEEVNVISNNFLELRDGGAFHNGEAVAKEIVAIS
QRQEFRH

Sequences:

>Translated_327_residues
MSNPKVVVIGGGTGIPVVLKALRKEKVDLTAIVTVADDGGSSGRIRSAVSIAPPGDLRNVLIAMSDMPKFYADILQYRFD
KSDGELAGHPLGNLIIAAISEMQGSTYRAIQTLAQFFHVEGKIYPSSDAALTLHAVFKDSHEVSGESQIAGYKGLIDHVY
LTQTVNGESPIASRNVVKSIMEADTIVLGPGSLFTSILPNIVIPEICEALWKTSAKIIYVCNIMTQRGETEQFTDADHVR
VLNEHIGTKVIDTVLVNIQEVPEEYMNTNKFDEYLVQVDHDFAALKAEEVNVISNNFLELRDGGAFHNGEAVAKEIVAIS
QRQEFRH
>Mature_326_residues
SNPKVVVIGGGTGIPVVLKALRKEKVDLTAIVTVADDGGSSGRIRSAVSIAPPGDLRNVLIAMSDMPKFYADILQYRFDK
SDGELAGHPLGNLIIAAISEMQGSTYRAIQTLAQFFHVEGKIYPSSDAALTLHAVFKDSHEVSGESQIAGYKGLIDHVYL
TQTVNGESPIASRNVVKSIMEADTIVLGPGSLFTSILPNIVIPEICEALWKTSAKIIYVCNIMTQRGETEQFTDADHVRV
LNEHIGTKVIDTVLVNIQEVPEEYMNTNKFDEYLVQVDHDFAALKAEEVNVISNNFLELRDGGAFHNGEAVAKEIVAISQ
RQEFRH

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=253, Percent_Identity=34.7826086956522, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 35708; Mature: 35577

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPKVVVIGGGTGIPVVLKALRKEKVDLTAIVTVADDGGSSGRIRSAVSIAPPGDLRNV
CCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHH
LIAMSDMPKFYADILQYRFDKSDGELAGHPLGNLIIAAISEMQGSTYRAIQTLAQFFHVE
HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GKIYPSSDAALTLHAVFKDSHEVSGESQIAGYKGLIDHVYLTQTVNGESPIASRNVVKSI
CEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHH
MEADTIVLGPGSLFTSILPNIVIPEICEALWKTSAKIIYVCNIMTQRGETEQFTDADHVR
HHCCEEEECCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCCHHHHH
VLNEHIGTKVIDTVLVNIQEVPEEYMNTNKFDEYLVQVDHDFAALKAEEVNVISNNFLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE
RDGGAFHNGEAVAKEIVAISQRQEFRH
CCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNPKVVVIGGGTGIPVVLKALRKEKVDLTAIVTVADDGGSSGRIRSAVSIAPPGDLRNV
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHH
LIAMSDMPKFYADILQYRFDKSDGELAGHPLGNLIIAAISEMQGSTYRAIQTLAQFFHVE
HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GKIYPSSDAALTLHAVFKDSHEVSGESQIAGYKGLIDHVYLTQTVNGESPIASRNVVKSI
CEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHH
MEADTIVLGPGSLFTSILPNIVIPEICEALWKTSAKIIYVCNIMTQRGETEQFTDADHVR
HHCCEEEECCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCCHHHHH
VLNEHIGTKVIDTVLVNIQEVPEEYMNTNKFDEYLVQVDHDFAALKAEEVNVISNNFLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE
RDGGAFHNGEAVAKEIVAISQRQEFRH
CCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]