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The map label for this gene is appC [H]

Identifier: 125624266

GI number: 125624266

Start: 1430053

End: 1431072

Strand: Reverse

Name: appC [H]

Synonym: llmg_1458

Alternate gene names: 125624266

Gene position: 1431072-1430053 (Counterclockwise)

Preceding gene: 125624267

Following gene: 125624265

Centisome position: 56.58

GC content: 39.61

Gene sequence:

>1020_bases
ATGGCTGAAATAACGACAGATCATAAAGCAAATGAATTAAAAGAACCAGAAAAGATTGAGCTTGAAAAGAAACAGCATAT
GGTTTTTTTACGTAATACAAAATCGATTATTGGTTTGAGTATTTTTACTTTCTTTATTTTAGTAGCTATCTTTGGACCTT
TACTTGCACCTTTTGACCCCAATAAAACTTCTGCATTAGCTAATGCAGCTCCATCGACGCAACATTGGCTAGGTACAACC
AATGTTGGTCAAGATATCTTCTCGCAAATCATTATTGGTACCAGAGGTGTGATGGTAGTTAGTTTATCAACTGGTCTGAT
TGCGACAGTATTGGCAGCAGTCATTGGTGTATCAGCGGGTTTCTTGTCAGGTTGGGGCGATGAAATCTTATCAATGTTAA
CAAATATTTTCTTGGTTATTCCGGGACTTCCACTGATTATCATCATTATGGGAACAATGACAAATGCAGGGTTGGCAGCG
ATTGTTTTGGTCATATCTTTTACTGGTTGGGCTTGGGGTGCAAGAGTCTTACGCTCACAAACCATGTCTTTAAGAACAAG
AGATTTTGTTGAAGCAGCCAGAGCTTCTGGAGAATCACGTTTACGGATAATCATATTTGAGATTTTACCAAATTTAACGG
CTATTTTGGCTTCGACATTTATCGGAACAGTCACAGCAGCAATCATGTCTTTGGTTACTTTGTCTTATATCGGGATTATT
CCTCCGTCAGACTGGTCATGGGGAACGGTGCTTTATTATGCACAAAATAATGGCGCATTTACTTCGGGACAATGGTGGTG
GTACGCGCCAGCAGGTCTCTGTGTTGCTTTTCTGGGAATGAGTCTTGCCTTGATAAACTTTGGTATTGATGAATTTGTCA
ATCCTCGTCTTCGTAATACTGGTATGAATGCAAAAATTCTTAAAAGGCGTGGAGTTCGTCCAAGAGTTGGCTTTACTCCG
ATTGCCAACAGCAATCGAGATAATCAAGGACATCTTATCAAAAAAAAGGAGGCCCACTAA

Upstream 100 bases:

>100_bases
GGTATTTTCCTAGTTATTACCTTATCAGTATTGATTGCTAATGTTGTCGCAGACATAATTTATGCATTTCTTGATCCACG
TACACGAAAGGAGGGTTAAA

Downstream 100 bases:

>100_bases
TGACAGATTTTTCAAATACTGACCCAGTTTTAGAAATAAAAAATTTGAGCATTGATTATGGATTTACAGAAAATGCAGCT
CATGTTCTTCGAGGAGTCAA

Product: putative di/Tri-peptide transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAEITTDHKANELKEPEKIELEKKQHMVFLRNTKSIIGLSIFTFFILVAIFGPLLAPFDPNKTSALANAAPSTQHWLGTT
NVGQDIFSQIIIGTRGVMVVSLSTGLIATVLAAVIGVSAGFLSGWGDEILSMLTNIFLVIPGLPLIIIIMGTMTNAGLAA
IVLVISFTGWAWGARVLRSQTMSLRTRDFVEAARASGESRLRIIIFEILPNLTAILASTFIGTVTAAIMSLVTLSYIGII
PPSDWSWGTVLYYAQNNGAFTSGQWWWYAPAGLCVAFLGMSLALINFGIDEFVNPRLRNTGMNAKILKRRGVRPRVGFTP
IANSNRDNQGHLIKKKEAH

Sequences:

>Translated_339_residues
MAEITTDHKANELKEPEKIELEKKQHMVFLRNTKSIIGLSIFTFFILVAIFGPLLAPFDPNKTSALANAAPSTQHWLGTT
NVGQDIFSQIIIGTRGVMVVSLSTGLIATVLAAVIGVSAGFLSGWGDEILSMLTNIFLVIPGLPLIIIIMGTMTNAGLAA
IVLVISFTGWAWGARVLRSQTMSLRTRDFVEAARASGESRLRIIIFEILPNLTAILASTFIGTVTAAIMSLVTLSYIGII
PPSDWSWGTVLYYAQNNGAFTSGQWWWYAPAGLCVAFLGMSLALINFGIDEFVNPRLRNTGMNAKILKRRGVRPRVGFTP
IANSNRDNQGHLIKKKEAH
>Mature_338_residues
AEITTDHKANELKEPEKIELEKKQHMVFLRNTKSIIGLSIFTFFILVAIFGPLLAPFDPNKTSALANAAPSTQHWLGTTN
VGQDIFSQIIIGTRGVMVVSLSTGLIATVLAAVIGVSAGFLSGWGDEILSMLTNIFLVIPGLPLIIIIMGTMTNAGLAAI
VLVISFTGWAWGARVLRSQTMSLRTRDFVEAARASGESRLRIIIFEILPNLTAILASTFIGTVTAAIMSLVTLSYIGIIP
PSDWSWGTVLYYAQNNGAFTSGQWWWYAPAGLCVAFLGMSLALINFGIDEFVNPRLRNTGMNAKILKRRGVRPRVGFTPI
ANSNRDNQGHLIKKKEAH

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=258, Percent_Identity=27.1317829457364, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1787760, Length=263, Percent_Identity=30.0380228136882, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1789889, Length=251, Percent_Identity=29.0836653386454, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787498, Length=296, Percent_Identity=28.0405405405405, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1789964, Length=284, Percent_Identity=26.056338028169, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788505, Length=193, Percent_Identity=29.0155440414508, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787549, Length=249, Percent_Identity=22.8915662650602, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36903; Mature: 36772

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEITTDHKANELKEPEKIELEKKQHMVFLRNTKSIIGLSIFTFFILVAIFGPLLAPFDP
CCCCCCCCCHHHCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
NKTSALANAAPSTQHWLGTTNVGQDIFSQIIIGTRGVMVVSLSTGLIATVLAAVIGVSAG
CCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH
FLSGWGDEILSMLTNIFLVIPGLPLIIIIMGTMTNAGLAAIVLVISFTGWAWGARVLRSQ
HHCCCHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
TMSLRTRDFVEAARASGESRLRIIIFEILPNLTAILASTFIGTVTAAIMSLVTLSYIGII
HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPSDWSWGTVLYYAQNNGAFTSGQWWWYAPAGLCVAFLGMSLALINFGIDEFVNPRLRNT
CCCCCCCCEEEEEEECCCCEECCCEEEECHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCC
GMNAKILKRRGVRPRVGFTPIANSNRDNQGHLIKKKEAH
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEITTDHKANELKEPEKIELEKKQHMVFLRNTKSIIGLSIFTFFILVAIFGPLLAPFDP
CCCCCCCCHHHCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
NKTSALANAAPSTQHWLGTTNVGQDIFSQIIIGTRGVMVVSLSTGLIATVLAAVIGVSAG
CCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH
FLSGWGDEILSMLTNIFLVIPGLPLIIIIMGTMTNAGLAAIVLVISFTGWAWGARVLRSQ
HHCCCHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
TMSLRTRDFVEAARASGESRLRIIIFEILPNLTAILASTFIGTVTAAIMSLVTLSYIGII
HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPSDWSWGTVLYYAQNNGAFTSGQWWWYAPAGLCVAFLGMSLALINFGIDEFVNPRLRNT
CCCCCCCCEEEEEEECCCCEECCCEEEECHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCC
GMNAKILKRRGVRPRVGFTPIANSNRDNQGHLIKKKEAH
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]