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The map label for this gene is tnp905

Identifier: 125624139

GI number: 125624139

Start: 1292447

End: 1293622

Strand: Direct

Name: tnp905

Synonym: llmg_1319

Alternate gene names: 125624139

Gene position: 1292447-1293622 (Clockwise)

Preceding gene: 125624137

Following gene: 125624142

Centisome position: 51.1

GC content: 39.12

Gene sequence:

>1176_bases
ATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGATATTGATGAATTTTTCCGTACTTCTCTTGA
AACTGCTATGAATGATCTGCTTCAAGCAGAGTTATCAGCCTTTTTAGGGTATGAACCTTACGATAAAGTAGGCTATAATT
CTGGGAATAGTCGTAACGGAAGCTATTCACGGCAATTTGAAACCAAATATGGGACTGTTCAGTTGAGCATTCCTAGAGAT
CGTAATGGGAACTTTAGTCCAGCTTTGCTTCCCGCTTATGGACGTCGAGATGACCACTTGGAAGAGATGGTTATCAAACT
CTATCAAACCGGTGTAACGACTCGAGAAATTAGTGATATCATCGAGCGAATGTATGGTCATCACTATAGTCCTGCCACAA
TTTCTAATATCTCAAAAGCAACTCAGGAGAATGTCGCTACTTTTCATGAGCGAAGCTTAGAAGCCAATTACTCTGTTTTA
TTTCTTGACGGAACCTATCTTCCATTAAGACGTGGAACCGTTAGTAAAGAATGTATTCATATCGCACTTGGCATTACACC
AGAAGGACAGAAGGCTGTTCTTGGATATGAAATCGCCCCAAATGAAAATAATGCTTCTTGGTCCACCCTGTTAGACAAGC
TTCAAAACCAAGGAATCCAACAGGTTTCTCTTGTAGTGACCGATGGCTTCAAGGGGCTTGAACAGATTATCAGTCAGGCT
TACCCATTAGCTAAACAACAACGTTGCTTAATTCATATTAGTCGAAATCTAGCTAGTAAAGTGAAACGAGCAGATAGAGC
GGTTATTCTGGAGCAATTTAAAACGATTTATCGTGCTGAAAATTTAGAAATGGCAGTGCAAGCTTTAGAGAACTTTATCG
CCGAATGGAAACCAAAGTATAGGAAAGTCATGGAAAGTCTGGAGAATACGGATAATCTTTTAACTTTTTATCAGTTTCCC
TACCAGATTTGGCACAGCATTTATTCGACAAACCTCATTGAGTCTCTTAACAAAGAAATCAAACGTCAAACGAAAAAGAA
GGTTCTTTTTCCTAACGAGGAGGCTCTGGAACGTTACTTAGTTACTTTGTTTGAAGATTATAATTTCAAGCAAAGTCAAC
GCATCCATAAAGGGTTTGGCCAATGTGCTGACACACTTGAAAGCTTATTTGATTAA

Upstream 100 bases:

>100_bases
TCTTACATTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTA
CTAGAAAGAGATTTATTCCT

Downstream 100 bases:

>100_bases
TATTCTTCAACTCTACTTGAGTGTTTACACATAATTATTGACAGTATCAACTTTAATTTATATATCTTGCACTTCTATAT
ATAATAAAACTTATTTTTAT

Product: transposase for insertion sequence element IS905H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTQFTTELLNFLAQKQDIDEFFRTSLETAMNDLLQAELSAFLGYEPYDKVGYNSGNSRNGSYSRQFETKYGTVQLSIPRD
RNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISKATQENVATFHERSLEANYSVL
FLDGTYLPLRRGTVSKECIHIALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIISQA
YPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYQFP
YQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQSQRIHKGFGQCADTLESLFD

Sequences:

>Translated_391_residues
MTQFTTELLNFLAQKQDIDEFFRTSLETAMNDLLQAELSAFLGYEPYDKVGYNSGNSRNGSYSRQFETKYGTVQLSIPRD
RNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISKATQENVATFHERSLEANYSVL
FLDGTYLPLRRGTVSKECIHIALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIISQA
YPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYQFP
YQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQSQRIHKGFGQCADTLESLFD
>Mature_390_residues
TQFTTELLNFLAQKQDIDEFFRTSLETAMNDLLQAELSAFLGYEPYDKVGYNSGNSRNGSYSRQFETKYGTVQLSIPRDR
NGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISKATQENVATFHERSLEANYSVLF
LDGTYLPLRRGTVSKECIHIALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIISQAY
PLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYQFPY
QIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQSQRIHKGFGQCADTLESLFD

Specific function: Required for the transposition of the insertion element

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRA5_LACLA (P35881)

Other databases:

- EMBL:   L20851
- EMBL:   AE005176
- PIR:   D86775
- RefSeq:   NP_267360.1
- ProteinModelPortal:   P35881
- GeneID:   1114851
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L24515
- NMPDR:   fig|272623.1.peg.1239
- HOGENOM:   HBG729597
- OMA:   VASFHER
- ProtClustDB:   CLSK697626
- BioCyc:   LLAC272623:L24515-MONOMER
- InterPro:   IPR001207

Pfam domain/function: PF00872 Transposase_mut

EC number: NA

Molecular weight: Translated: 45032; Mature: 44900

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFTTELLNFLAQKQDIDEFFRTSLETAMNDLLQAELSAFLGYEPYDKVGYNSGNSRNG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
SYSRQFETKYGTVQLSIPRDRNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDI
CCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
IERMYGHHYSPATISNISKATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIH
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHEE
IALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIISQA
EEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHH
YPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VTLFEDYNFKQSQRIHKGFGQCADTLESLFD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQFTTELLNFLAQKQDIDEFFRTSLETAMNDLLQAELSAFLGYEPYDKVGYNSGNSRNG
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
SYSRQFETKYGTVQLSIPRDRNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDI
CCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
IERMYGHHYSPATISNISKATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIH
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHEE
IALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIISQA
EEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHH
YPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VTLFEDYNFKQSQRIHKGFGQCADTLESLFD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195098; 11337471