| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485564
Identifier: 124485564
GI number: 124485564
Start: 725858
End: 726739
Strand: Reverse
Name: 124485564
Synonym: Mlab_0742
Alternate gene names: NA
Gene position: 726739-725858 (Counterclockwise)
Preceding gene: 124485565
Following gene: 124485563
Centisome position: 40.26
GC content: 49.55
Gene sequence:
>882_bases TTGACCGAAGATCTTGTCGATAAAAGAAAATTACTCCTTGAAGAGTCTGAAGAACACAAAGCAAAGCGTAACGAGTTAAA CTCCCAGGCAAGCCAGTTTGCCCGCGAAAGAAACGAGTTAAACAACGCAACCCGCCAGTATGTCGAGGACGCACAGAAAA ACAAAGAGCTCCGTGACCAGTCCAATAACGACGTTCAGTCCCTGAAAGAGAAAAGGAACGAGTTAAACGACAAGGCAAAC ACCCTCTTTGAAGAAATCGATGCCCTCAGAGGAGAGCAGGGAACCGGTTCGGCGGCACAGAGCCACGAAAAGAAGCCCTC GGCAAAAGACATCCAGCGTCAGATCGACCAGCTCGAAGAGAGACAGCAGACTGAGTCGATGTCCAAAGAGAAGGAAAATG AGCTTGTTGACAAAATCAAACAGCTCAGGACCGAACTCAAGGACCAGGAAGTCGAGCACGAACAGAATAAAGAAGTCCGC ACCCGCTTAATCGAGGCACGCGAATTCCGCAAGCAGGCATCCGCAATCCACGCTGAAGTAACCGAGAAGGCCGAACTTGC CCAGAAACACCACGACCTCATGGTCGAGTGCTACAGGAAGGCAGACAAATCACGGGAAGGCGCAGACGCAAAACACAAAC AGTTCGTCGAGGCACAGGAAGCTGCAGATGCAGAACACAAACAGTTCCTCGAATGCCAGAAACAGCTCCGTGACTATGAC AAAGTCTTAACCGGCATCCGCTCAAAGCAGAAGAAAGTCAAGAGCGTAAAAGAGAACAAGTCCGCAAGGAAGGAAGCAGA AACCATCTTCAACGCATTCAAGAGCGGAGAGAAGCTCACCACCGAGGACTTATTAAAACTTCAGCGCTCAAAGCTTATCT GA
Upstream 100 bases:
>100_bases TGTTTTTACGTCATTTTTCATGCATTTTGGTATCTTCTCCAGCGCGGGCGACCTTTGGGACCACCCCTCTGCGGACGGCT GCTCAGGATAGGTAAGAACG
Downstream 100 bases:
>100_bases AGTTTTCAAATATAACCTATATTTTTTCCCGCTTTTTTCCCACAGATATTTAATCCATAAATGGTAACTGTATAACAATG AGGGCACGGACTCTTATTCT
Product: hypothetical protein
Products: L-serine; D-serine; phosphate
Alternate protein names: Coiled-Coil Protein; Coiled-Coil Protein-Like Protein; Phosphoserine Phosphatase SerB; Phosphoserine Phosphatase Serb; Coiled-Coil Domain-Containing Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTEDLVDKRKLLLEESEEHKAKRNELNSQASQFARERNELNNATRQYVEDAQKNKELRDQSNNDVQSLKEKRNELNDKAN TLFEEIDALRGEQGTGSAAQSHEKKPSAKDIQRQIDQLEERQQTESMSKEKENELVDKIKQLRTELKDQEVEHEQNKEVR TRLIEAREFRKQASAIHAEVTEKAELAQKHHDLMVECYRKADKSREGADAKHKQFVEAQEAADAEHKQFLECQKQLRDYD KVLTGIRSKQKKVKSVKENKSARKEAETIFNAFKSGEKLTTEDLLKLQRSKLI
Sequences:
>Translated_293_residues MTEDLVDKRKLLLEESEEHKAKRNELNSQASQFARERNELNNATRQYVEDAQKNKELRDQSNNDVQSLKEKRNELNDKAN TLFEEIDALRGEQGTGSAAQSHEKKPSAKDIQRQIDQLEERQQTESMSKEKENELVDKIKQLRTELKDQEVEHEQNKEVR TRLIEAREFRKQASAIHAEVTEKAELAQKHHDLMVECYRKADKSREGADAKHKQFVEAQEAADAEHKQFLECQKQLRDYD KVLTGIRSKQKKVKSVKENKSARKEAETIFNAFKSGEKLTTEDLLKLQRSKLI >Mature_292_residues TEDLVDKRKLLLEESEEHKAKRNELNSQASQFARERNELNNATRQYVEDAQKNKELRDQSNNDVQSLKEKRNELNDKANT LFEEIDALRGEQGTGSAAQSHEKKPSAKDIQRQIDQLEERQQTESMSKEKENELVDKIKQLRTELKDQEVEHEQNKEVRT RLIEAREFRKQASAIHAEVTEKAELAQKHHDLMVECYRKADKSREGADAKHKQFVEAQEAADAEHKQFLECQKQLRDYDK VLTGIRSKQKKVKSVKENKSARKEAETIFNAFKSGEKLTTEDLLKLQRSKLI
Specific function: Unknown
COG id: COG1340
COG function: function code S; Uncharacterized archaeal coiled-coil protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.3
Molecular weight: Translated: 34183; Mature: 34052
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDLVDKRKLLLEESEEHKAKRNELNSQASQFARERNELNNATRQYVEDAQKNKELRDQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNNDVQSLKEKRNELNDKANTLFEEIDALRGEQGTGSAAQSHEKKPSAKDIQRQIDQLEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH RQQTESMSKEKENELVDKIKQLRTELKDQEVEHEQNKEVRTRLIEAREFRKQASAIHAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEKAELAQKHHDLMVECYRKADKSREGADAKHKQFVEAQEAADAEHKQFLECQKQLRDYD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH KVLTGIRSKQKKVKSVKENKSARKEAETIFNAFKSGEKLTTEDLLKLQRSKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TEDLVDKRKLLLEESEEHKAKRNELNSQASQFARERNELNNATRQYVEDAQKNKELRDQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNNDVQSLKEKRNELNDKANTLFEEIDALRGEQGTGSAAQSHEKKPSAKDIQRQIDQLEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH RQQTESMSKEKENELVDKIKQLRTELKDQEVEHEQNKEVRTRLIEAREFRKQASAIHAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEKAELAQKHHDLMVECYRKADKSREGADAKHKQFVEAQEAADAEHKQFLECQKQLRDYD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH KVLTGIRSKQKKVKSVKENKSARKEAETIFNAFKSGEKLTTEDLLKLQRSKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O
Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA