| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485498
Identifier: 124485498
GI number: 124485498
Start: 646512
End: 647252
Strand: Reverse
Name: 124485498
Synonym: Mlab_0675
Alternate gene names: NA
Gene position: 647252-646512 (Counterclockwise)
Preceding gene: 124485499
Following gene: 124485494
Centisome position: 35.86
GC content: 48.04
Gene sequence:
>741_bases ATGAAGAAAATCAGACTGATGATTCTTGGAGCATGCATACTTGTCATCTGCATATTTGCAGCGGGTTGCGTATCTCCGGA AGTACCGGTGAACACGGATGATCCTGTCCTGACGGTTATTGTCGAAAAGGAAGGCATACTGATTCCGGCAAATGCTGCGA TGACATTTATTCTCCCGGCAAATCCCACGACCGGCTACACCTGGAACGTAATGGAAAGTTCCGGACTGAATGTCACCGAT GAGTATAAGTCGACACCTGTTCCCGAAGGGTGGACAGGCGGAGGAGGCTATCAGTATTACACATTAACCGCTGAAAAGGC AGGGACCTATACGTTCAAAGCAGCATATGCACGTTCCTGGGAAACGGATACCGAACCGATCTATACCATGAAGCAGATTC TGGTCTTTTCAGAGGCAGAGAACGATGATTATGCCGGCGATGTTATGCTGAGCGTACTGTTTGACGGGACGGTCAATCCG AAAGCAGGCGACGTTGTCAAAATCTGCACGGAAGGAAACCCGACAACCGGGTATTACTGGACAGCCGTAACGCAGGATGG ATTAAAGGTCGTAAAGGATGATTATATCACTGATACCACCACCGGACTTGTTGGTGTCGGCGGAACATACGTTTGGTATG TAACGGCAGAAAAAGCAGGAACGTATGAGTTCAAAGCAACATATCAGAGATCAGGGCAGGATCCGGCAAATGTGTTCTTT TTCGATCTGACGTTTACGTAA
Upstream 100 bases:
>100_bases AGTACCTTTTACCGCTCGATCTGACAAGCAAGGTTCTCGACGAGTAACCATCCCTTTTTTTCTAAAAAAATACTTATATT AGTCTGGTCCATCATTCAGT
Downstream 100 bases:
>100_bases ATTCGGAAAGAGGTAAAATAAAAAGAAAAAATATTTTTTTATTCTTTCACTGAAATTTCAAGTCCGCCAAAGAGTTTGAC GGTTTTGTTGTAGGCAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKKIRLMILGACILVICIFAAGCVSPEVPVNTDDPVLTVIVEKEGILIPANAAMTFILPANPTTGYTWNVMESSGLNVTD EYKSTPVPEGWTGGGGYQYYTLTAEKAGTYTFKAAYARSWETDTEPIYTMKQILVFSEAENDDYAGDVMLSVLFDGTVNP KAGDVVKICTEGNPTTGYYWTAVTQDGLKVVKDDYITDTTTGLVGVGGTYVWYVTAEKAGTYEFKATYQRSGQDPANVFF FDLTFT
Sequences:
>Translated_246_residues MKKIRLMILGACILVICIFAAGCVSPEVPVNTDDPVLTVIVEKEGILIPANAAMTFILPANPTTGYTWNVMESSGLNVTD EYKSTPVPEGWTGGGGYQYYTLTAEKAGTYTFKAAYARSWETDTEPIYTMKQILVFSEAENDDYAGDVMLSVLFDGTVNP KAGDVVKICTEGNPTTGYYWTAVTQDGLKVVKDDYITDTTTGLVGVGGTYVWYVTAEKAGTYEFKATYQRSGQDPANVFF FDLTFT >Mature_246_residues MKKIRLMILGACILVICIFAAGCVSPEVPVNTDDPVLTVIVEKEGILIPANAAMTFILPANPTTGYTWNVMESSGLNVTD EYKSTPVPEGWTGGGGYQYYTLTAEKAGTYTFKAAYARSWETDTEPIYTMKQILVFSEAENDDYAGDVMLSVLFDGTVNP KAGDVVKICTEGNPTTGYYWTAVTQDGLKVVKDDYITDTTTGLVGVGGTYVWYVTAEKAGTYEFKATYQRSGQDPANVFF FDLTFT
Specific function: Unknown
COG id: COG5513
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26834; Mature: 26834
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRLMILGACILVICIFAAGCVSPEVPVNTDDPVLTVIVEKEGILIPANAAMTFILPA CCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEC NPTTGYTWNVMESSGLNVTDEYKSTPVPEGWTGGGGYQYYTLTAEKAGTYTFKAAYARSW CCCCCEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCC ETDTEPIYTMKQILVFSEAENDDYAGDVMLSVLFDGTVNPKAGDVVKICTEGNPTTGYYW CCCCCHHHHEEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEE TAVTQDGLKVVKDDYITDTTTGLVGVGGTYVWYVTAEKAGTYEFKATYQRSGQDPANVFF EEEECCCCEEECCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEE FDLTFT EEEEEC >Mature Secondary Structure MKKIRLMILGACILVICIFAAGCVSPEVPVNTDDPVLTVIVEKEGILIPANAAMTFILPA CCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEC NPTTGYTWNVMESSGLNVTDEYKSTPVPEGWTGGGGYQYYTLTAEKAGTYTFKAAYARSW CCCCCEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCC ETDTEPIYTMKQILVFSEAENDDYAGDVMLSVLFDGTVNPKAGDVVKICTEGNPTTGYYW CCCCCHHHHEEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEE TAVTQDGLKVVKDDYITDTTTGLVGVGGTYVWYVTAEKAGTYEFKATYQRSGQDPANVFF EEEECCCCEEECCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEE FDLTFT EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA