| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485485
Identifier: 124485485
GI number: 124485485
Start: 630434
End: 633040
Strand: Reverse
Name: 124485485
Synonym: Mlab_0662
Alternate gene names: NA
Gene position: 633040-630434 (Counterclockwise)
Preceding gene: 124485487
Following gene: 124485484
Centisome position: 35.07
GC content: 45.68
Gene sequence:
>2607_bases ATGGATTTTAAGAGTTTTTGGAACGATAAAAAATATCGTTATGGCATTATCGGACTCGCTGTCCTGATATGTACTTTAAT TGCTTTCTGGATTAGAATAATCCCGATGGCAGGACTTGCCGGCACAGGAGATATGACGGCAGGTCCGGATGCCTGGTATA ACCTGCGACTGATAGAAGTAGCACTTGCAAATAACTTTGGCTTCATCTTCTTTGAACCAATGACATTGTATCCGACAGGA CAGGAGATTGTCTGGGGTCCACTCTTTACCTACATCGCTTCATTCTTTGCTCTTCTCGCAGGAGCAGCATCAAGGGTAGA TGTGATCACTGCAGCTTCATGGGCACCGGCAGTTCTTGGAACACTGATGGTTCCCGTCATGTTCTTCCTTGGAAAAAGGA TCGGCGACTGGAAAACCGGCATCATCTCTGCTCTTTTCATCGCAGTGATAGGAGGCCAGTTCCTTTCCCGCTCACTGTAT GGACATCTGGATCACCACATCGCAGAAACATTTTTCTCCTGTTTGTTTTGTCTCTGCTATGTTCTCGCATTGTATGCGCT GAGCGATAAAAAAATCGATTTCAAGCAGGCCGCAACGTTAAAGTTGCCGGTCATTTACGGCGTTATTTGCGGTATCGCGT ACTTCCTTGGTCTTCTTACCATGACGACCATGGTTGTCTTTGGATTGTTCGTCGCAGTATTTACGTTGATTCAGTTCGTT CTGAATCAATATTCTGGGAAACCAACGGAGTACCTGCTGACATTAAATGTGATAACGTTCATGATTGTCGCTCTGGGACT GCTATTATACGGCATACGTGATCTGAGTTTTGGCTTTGTTAACTATTCCTTAGGTTTGTTCCTGGTACATCTCTTCCTCG TTCTCGGTACGATAATATTGTACCTCATCTCACGTTTCATAACAAAGTTCGATAAACCATGGTATTATTATCTGATTACT CTCGCTCTGCTGTTGGCAGGAGGTTTGCTATGCCTTGCAGTCGTTCTTCCTGATCTCTTCAGTGCACTCATAGGAAATCT TGCCGGATTTTTCGCAAACAATACCACGGCAGCCACTGTACAGGAGATGTCGTCATGGTCTTTTGCCAGCGCTGTTTCAT CATACAACTGGGGAATCCTGCTTGCCATCGGCGGCTTTGTATGTCTCCTCTGGAAGATCTGGAAAAACCAGACTCCCGGT CTTATCTTTGTAGTCATATGGTCCCTGTTCATGTTTTTTGCGACTTGTGCTCACATACGCTGGGAGTATTATTTTGCCGC AAATGTCGCATTACTCGCCGCAGTATTCGTAGGTTGGGCAATTACGTTTGCACAAAAAGATTTTGCTTTGCTCGTAGGAA ACCAACCGGATACAAATACGCCGGTTGAATCTGCAAATAAGAATGAGATAAAGAAATCCAAAACCAAGGAAAACTCTGCA GCAGAAAAACCAAGTTCAATCAAACTTGGTATCTGTGCCATTATTATGATAATAGCAGTGGTATTTGTTGGATTATCTGC TGCATATGCCGTTGAACTAAGTTCTGCCTCTGCAAACGGAGGTACTCCACAGGACTGGATCGATGCATGTGAATGGCTTT CCGTAAACACTCCCGAGACTGGCGTAGATTATCTGACGATTTATGACGAATCCACATTTACCTATCCATCAGAGTCCTAT GGTGTTCTTTCATGGTGGGACTATGGCCACTACATCACCACCATCGGTAAACGGATTCCAAACAGCAATCCGTTCCAGGC TGGGGTTACCGGTGAATACGGTGTTGCAGCCGTGTTAACCAATACCGATGAGTCACAGATTACGGAAAAGCTGGATTATC TTGGTACAAAATACGTGATGACCGATTATCTTATGGCAAACGGCATCTTCGGAGCGATGGCCATCTGGAATGACACCACA TTACAAACAGCCCCGTATTACTATTCATTCCTTCAACAGGGCACGGATGGAACTTATTCCTATGTCTCGGCAGCGACACC TGAGTTCTACGACACTTTGACTGTCAGACTCCAAAACTTCGACGGCTCAATGACTGATGCAGGAAATGTTTATGTGGTAA TCACCGATTCAACTGCAGGATACGGTGTCCCGGTGATCACATCAGTCAAAGCCTACAGCAATGCAGACGAAGCATGGGCA GCTGCAGAAAGCTACAATGCCAACGCGGCAACTGGAAAGCAGGCATACGTGATCTCGGCTCCCACGGACCTGACCAATTA CGATCTCCCAAGTGTTGATGTGCCAGCACTTCAGCACTTCCGCCTGGTGCATGAAACCGCGACCTACGTAGTGGGCGGCT ACGTTACTGGAGCAAATGAAGGCGGTACCGCATATGTCAAGACATTTGAATATGTTCCTGGGGCTGTCATCAATGGAGAA GGAATCATAGAAGTCGACGTTATTACAAATAACGGACGCACGTTCACCTACCGTCAGGAAAGCGTGAATGGACAGTTCAT TGTACCATATTCAACCACAGGAAGCTCATATGATGTTAAGACTACGAGCCTCTACAGAATTGTTGGAACAGACCAGACGT TTACCGTCTCAGAAGAAGCAGTTTTGAATGGTCTGACCATCAACTAA
Upstream 100 bases:
>100_bases CCATACTTAGAAATATTGCTGAGAACTGATTTGCTTTACAATTATTTTATCATATAAAACGCCCAGATAATACATATCTA ATATCTACCAGTGAGAAACA
Downstream 100 bases:
>100_bases CTTTTTTCCCACACTTTTATCACAAACTACTTTCCATACTACTCATAAGTATGTTCAAAGTTGGAGAGACCGTACGTTAC GGACGAACCGGTACGGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Oligosaccharyl Transferase; Transmembrane Oligosaccharyl Transferase; Transmembrane Oligosaccharyltransferase; Oligosaccharyltransferase AglB; Oligosaccharyltransferase
Number of amino acids: Translated: 868; Mature: 868
Protein sequence:
>868_residues MDFKSFWNDKKYRYGIIGLAVLICTLIAFWIRIIPMAGLAGTGDMTAGPDAWYNLRLIEVALANNFGFIFFEPMTLYPTG QEIVWGPLFTYIASFFALLAGAASRVDVITAASWAPAVLGTLMVPVMFFLGKRIGDWKTGIISALFIAVIGGQFLSRSLY GHLDHHIAETFFSCLFCLCYVLALYALSDKKIDFKQAATLKLPVIYGVICGIAYFLGLLTMTTMVVFGLFVAVFTLIQFV LNQYSGKPTEYLLTLNVITFMIVALGLLLYGIRDLSFGFVNYSLGLFLVHLFLVLGTIILYLISRFITKFDKPWYYYLIT LALLLAGGLLCLAVVLPDLFSALIGNLAGFFANNTTAATVQEMSSWSFASAVSSYNWGILLAIGGFVCLLWKIWKNQTPG LIFVVIWSLFMFFATCAHIRWEYYFAANVALLAAVFVGWAITFAQKDFALLVGNQPDTNTPVESANKNEIKKSKTKENSA AEKPSSIKLGICAIIMIIAVVFVGLSAAYAVELSSASANGGTPQDWIDACEWLSVNTPETGVDYLTIYDESTFTYPSESY GVLSWWDYGHYITTIGKRIPNSNPFQAGVTGEYGVAAVLTNTDESQITEKLDYLGTKYVMTDYLMANGIFGAMAIWNDTT LQTAPYYYSFLQQGTDGTYSYVSAATPEFYDTLTVRLQNFDGSMTDAGNVYVVITDSTAGYGVPVITSVKAYSNADEAWA AAESYNANAATGKQAYVISAPTDLTNYDLPSVDVPALQHFRLVHETATYVVGGYVTGANEGGTAYVKTFEYVPGAVINGE GIIEVDVITNNGRTFTYRQESVNGQFIVPYSTTGSSYDVKTTSLYRIVGTDQTFTVSEEAVLNGLTIN
Sequences:
>Translated_868_residues MDFKSFWNDKKYRYGIIGLAVLICTLIAFWIRIIPMAGLAGTGDMTAGPDAWYNLRLIEVALANNFGFIFFEPMTLYPTG QEIVWGPLFTYIASFFALLAGAASRVDVITAASWAPAVLGTLMVPVMFFLGKRIGDWKTGIISALFIAVIGGQFLSRSLY GHLDHHIAETFFSCLFCLCYVLALYALSDKKIDFKQAATLKLPVIYGVICGIAYFLGLLTMTTMVVFGLFVAVFTLIQFV LNQYSGKPTEYLLTLNVITFMIVALGLLLYGIRDLSFGFVNYSLGLFLVHLFLVLGTIILYLISRFITKFDKPWYYYLIT LALLLAGGLLCLAVVLPDLFSALIGNLAGFFANNTTAATVQEMSSWSFASAVSSYNWGILLAIGGFVCLLWKIWKNQTPG LIFVVIWSLFMFFATCAHIRWEYYFAANVALLAAVFVGWAITFAQKDFALLVGNQPDTNTPVESANKNEIKKSKTKENSA AEKPSSIKLGICAIIMIIAVVFVGLSAAYAVELSSASANGGTPQDWIDACEWLSVNTPETGVDYLTIYDESTFTYPSESY GVLSWWDYGHYITTIGKRIPNSNPFQAGVTGEYGVAAVLTNTDESQITEKLDYLGTKYVMTDYLMANGIFGAMAIWNDTT LQTAPYYYSFLQQGTDGTYSYVSAATPEFYDTLTVRLQNFDGSMTDAGNVYVVITDSTAGYGVPVITSVKAYSNADEAWA AAESYNANAATGKQAYVISAPTDLTNYDLPSVDVPALQHFRLVHETATYVVGGYVTGANEGGTAYVKTFEYVPGAVINGE GIIEVDVITNNGRTFTYRQESVNGQFIVPYSTTGSSYDVKTTSLYRIVGTDQTFTVSEEAVLNGLTIN >Mature_868_residues MDFKSFWNDKKYRYGIIGLAVLICTLIAFWIRIIPMAGLAGTGDMTAGPDAWYNLRLIEVALANNFGFIFFEPMTLYPTG QEIVWGPLFTYIASFFALLAGAASRVDVITAASWAPAVLGTLMVPVMFFLGKRIGDWKTGIISALFIAVIGGQFLSRSLY GHLDHHIAETFFSCLFCLCYVLALYALSDKKIDFKQAATLKLPVIYGVICGIAYFLGLLTMTTMVVFGLFVAVFTLIQFV LNQYSGKPTEYLLTLNVITFMIVALGLLLYGIRDLSFGFVNYSLGLFLVHLFLVLGTIILYLISRFITKFDKPWYYYLIT LALLLAGGLLCLAVVLPDLFSALIGNLAGFFANNTTAATVQEMSSWSFASAVSSYNWGILLAIGGFVCLLWKIWKNQTPG LIFVVIWSLFMFFATCAHIRWEYYFAANVALLAAVFVGWAITFAQKDFALLVGNQPDTNTPVESANKNEIKKSKTKENSA AEKPSSIKLGICAIIMIIAVVFVGLSAAYAVELSSASANGGTPQDWIDACEWLSVNTPETGVDYLTIYDESTFTYPSESY GVLSWWDYGHYITTIGKRIPNSNPFQAGVTGEYGVAAVLTNTDESQITEKLDYLGTKYVMTDYLMANGIFGAMAIWNDTT LQTAPYYYSFLQQGTDGTYSYVSAATPEFYDTLTVRLQNFDGSMTDAGNVYVVITDSTAGYGVPVITSVKAYSNADEAWA AAESYNANAATGKQAYVISAPTDLTNYDLPSVDVPALQHFRLVHETATYVVGGYVTGANEGGTAYVKTFEYVPGAVINGE GIIEVDVITNNGRTFTYRQESVNGQFIVPYSTTGSSYDVKTTSLYRIVGTDQTFTVSEEAVLNGLTIN
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95155; Mature: 95155
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKSFWNDKKYRYGIIGLAVLICTLIAFWIRIIPMAGLAGTGDMTAGPDAWYNLRLIEV CCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE ALANNFGFIFFEPMTLYPTGQEIVWGPLFTYIASFFALLAGAASRVDVITAASWAPAVLG EEECCCCEEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH TLMVPVMFFLGKRIGDWKTGIISALFIAVIGGQFLSRSLYGHLDHHIAETFFSCLFCLCY HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLALYALSDKKIDFKQAATLKLPVIYGVICGIAYFLGLLTMTTMVVFGLFVAVFTLIQFV HHHHHHHCCCCCCHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNQYSGKPTEYLLTLNVITFMIVALGLLLYGIRDLSFGFVNYSLGLFLVHLFLVLGTIIL HHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLISRFITKFDKPWYYYLITLALLLAGGLLCLAVVLPDLFSALIGNLAGFFANNTTAATV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QEMSSWSFASAVSSYNWGILLAIGGFVCLLWKIWKNQTPGLIFVVIWSLFMFFATCAHIR HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH WEYYFAANVALLAAVFVGWAITFAQKDFALLVGNQPDTNTPVESANKNEIKKSKTKENSA EEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC AEKPSSIKLGICAIIMIIAVVFVGLSAAYAVELSSASANGGTPQDWIDACEWLSVNTPET CCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC GVDYLTIYDESTFTYPSESYGVLSWWDYGHYITTIGKRIPNSNPFQAGVTGEYGVAAVLT CCCEEEEEECCEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE NTDESQITEKLDYLGTKYVMTDYLMANGIFGAMAIWNDTTLQTAPYYYSFLQQGTDGTYS CCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHEEECCCCCCCCHHHHHHHHCCCCCCCH YVSAATPEFYDTLTVRLQNFDGSMTDAGNVYVVITDSTAGYGVPVITSVKAYSNADEAWA HHHCCCCHHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHEEEHHHCCCHHHHH AAESYNANAATGKQAYVISAPTDLTNYDLPSVDVPALQHFRLVHETATYVVGGYVTGANE HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCC GGTAYVKTFEYVPGAVINGEGIIEVDVITNNGRTFTYRQESVNGQFIVPYSTTGSSYDVK CCEEEEEEEECCCCEEECCCCEEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEE TTSLYRIVGTDQTFTVSEEAVLNGLTIN EEEEEEEEECCCEEEECHHHHHCCCCCC >Mature Secondary Structure MDFKSFWNDKKYRYGIIGLAVLICTLIAFWIRIIPMAGLAGTGDMTAGPDAWYNLRLIEV CCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE ALANNFGFIFFEPMTLYPTGQEIVWGPLFTYIASFFALLAGAASRVDVITAASWAPAVLG EEECCCCEEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH TLMVPVMFFLGKRIGDWKTGIISALFIAVIGGQFLSRSLYGHLDHHIAETFFSCLFCLCY HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLALYALSDKKIDFKQAATLKLPVIYGVICGIAYFLGLLTMTTMVVFGLFVAVFTLIQFV HHHHHHHCCCCCCHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNQYSGKPTEYLLTLNVITFMIVALGLLLYGIRDLSFGFVNYSLGLFLVHLFLVLGTIIL HHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLISRFITKFDKPWYYYLITLALLLAGGLLCLAVVLPDLFSALIGNLAGFFANNTTAATV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QEMSSWSFASAVSSYNWGILLAIGGFVCLLWKIWKNQTPGLIFVVIWSLFMFFATCAHIR HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH WEYYFAANVALLAAVFVGWAITFAQKDFALLVGNQPDTNTPVESANKNEIKKSKTKENSA EEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC AEKPSSIKLGICAIIMIIAVVFVGLSAAYAVELSSASANGGTPQDWIDACEWLSVNTPET CCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC GVDYLTIYDESTFTYPSESYGVLSWWDYGHYITTIGKRIPNSNPFQAGVTGEYGVAAVLT CCCEEEEEECCEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE NTDESQITEKLDYLGTKYVMTDYLMANGIFGAMAIWNDTTLQTAPYYYSFLQQGTDGTYS CCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHEEECCCCCCCCHHHHHHHHCCCCCCCH YVSAATPEFYDTLTVRLQNFDGSMTDAGNVYVVITDSTAGYGVPVITSVKAYSNADEAWA HHHCCCCHHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHEEEHHHCCCHHHHH AAESYNANAATGKQAYVISAPTDLTNYDLPSVDVPALQHFRLVHETATYVVGGYVTGANE HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCC GGTAYVKTFEYVPGAVINGEGIIEVDVITNNGRTFTYRQESVNGQFIVPYSTTGSSYDVK CCEEEEEEEECCCCEEECCCCEEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEE TTSLYRIVGTDQTFTVSEEAVLNGLTIN EEEEEEEEECCCEEEECHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA