| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485474
Identifier: 124485474
GI number: 124485474
Start: 623630
End: 624178
Strand: Reverse
Name: 124485474
Synonym: Mlab_0650
Alternate gene names: NA
Gene position: 624178-623630 (Counterclockwise)
Preceding gene: 124485475
Following gene: 124485472
Centisome position: 34.58
GC content: 46.81
Gene sequence:
>549_bases ATGAAACCATCATTTTCCGATTTGACGATGTGGATCATCTCTATCTGTGTTTTTGTCGCTGTTTTTATCTGTATTCTCTG CAATATGGCCTTCACCAATACCATCGGATGGCTGGTGTATCCGGTCTGTTCGCTGATATTCGGATGGCTCGTTTTAATGC CGATTTTGTATTACAAAAAGCGCGGGATAAAAATCTCGTTTGCGATCATTACGGCCCTTGTAATGCCGTTTCTTCTGGTG ATCGACCAGCTCGACGGCGGAGTCAGCTGGTTCCTTCCGATCGGCGTTCCGGTTTCGGCCACGGGAATCGTCTTCATGTG GATAATTTACGGTCTGCTGATCAAACCGCGGAGCATATGGTTCACCGTGCCGGCAGTTATTTTTCTCAGCGGCCTTCTGT GCATCTGCATCGACATGATCGTCAAAAATGCGCTCGGCGAAGGCGGATTTCCCTGGAGTTATATTGTTGCCAGCATTACG AGTTTCCTTGCCATCGTTATCTCGATTTTCGGCTTTGTAATGAAAAAAAGAAGTCTTCAGACCGAGTAA
Upstream 100 bases:
>100_bases AACGTAAAGCATAATCTTTCACATACATCTGGTGCGGTATTTTTGCACCGTCCCATTTTTTGCATGAAAGTATCGTTCCT GAAATAAAGAGCACACCGAC
Downstream 100 bases:
>100_bases TACGCGACCCGCTTGCCTTTTTCCCGGTATTCCCCGGCATACGTATCCAGATTTCGCTTGTATCCGATCCTGTCGACAAA CCCGAGTTCCTTGAGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKPSFSDLTMWIISICVFVAVFICILCNMAFTNTIGWLVYPVCSLIFGWLVLMPILYYKKRGIKISFAIITALVMPFLLV IDQLDGGVSWFLPIGVPVSATGIVFMWIIYGLLIKPRSIWFTVPAVIFLSGLLCICIDMIVKNALGEGGFPWSYIVASIT SFLAIVISIFGFVMKKRSLQTE
Sequences:
>Translated_182_residues MKPSFSDLTMWIISICVFVAVFICILCNMAFTNTIGWLVYPVCSLIFGWLVLMPILYYKKRGIKISFAIITALVMPFLLV IDQLDGGVSWFLPIGVPVSATGIVFMWIIYGLLIKPRSIWFTVPAVIFLSGLLCICIDMIVKNALGEGGFPWSYIVASIT SFLAIVISIFGFVMKKRSLQTE >Mature_182_residues MKPSFSDLTMWIISICVFVAVFICILCNMAFTNTIGWLVYPVCSLIFGWLVLMPILYYKKRGIKISFAIITALVMPFLLV IDQLDGGVSWFLPIGVPVSATGIVFMWIIYGLLIKPRSIWFTVPAVIFLSGLLCICIDMIVKNALGEGGFPWSYIVASIT SFLAIVISIFGFVMKKRSLQTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20324; Mature: 20324
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSFSDLTMWIISICVFVAVFICILCNMAFTNTIGWLVYPVCSLIFGWLVLMPILYYKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGIKISFAIITALVMPFLLVIDQLDGGVSWFLPIGVPVSATGIVFMWIIYGLLIKPRSIW CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHH FTVPAVIFLSGLLCICIDMIVKNALGEGGFPWSYIVASITSFLAIVISIFGFVMKKRSLQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TE CC >Mature Secondary Structure MKPSFSDLTMWIISICVFVAVFICILCNMAFTNTIGWLVYPVCSLIFGWLVLMPILYYKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGIKISFAIITALVMPFLLVIDQLDGGVSWFLPIGVPVSATGIVFMWIIYGLLIKPRSIW CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHH FTVPAVIFLSGLLCICIDMIVKNALGEGGFPWSYIVASITSFLAIVISIFGFVMKKRSLQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA