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The map label for this gene is rpl40e

Identifier: 124485475

GI number: 124485475

Start: 624265

End: 624408

Strand: Reverse

Name: rpl40e

Synonym: Mlab_0651

Alternate gene names: 124485475

Gene position: 624408-624265 (Counterclockwise)

Preceding gene: 124485476

Following gene: 124485474

Centisome position: 34.59

GC content: 46.53

Gene sequence:

>144_bases
ATGAGATTCCCAGAAGCAGAAGCAAGACTTCTTAATGTTAAAGTTTGCATGAAATGCAACGCACGTAACGCTGTTCGCGC
AACGACCTGCCGTAAATGCGGCTCGACGTCCCTTCGCCCGAAGAATAAAGAACGTAAAGCATAA

Upstream 100 bases:

>100_bases
TAGCCTTCCGCGAATGGTATATTTCGGCACGGTCTGAACGTAATCGTTAATATCAACAAGAGCATACATATTAGAACTCA
ATATACGGGGTTATTCATAG

Downstream 100 bases:

>100_bases
TCTTTCACATACATCTGGTGCGGTATTTTTGCACCGTCCCATTTTTTGCATGAAAGTATCGTTCCTGAAATAAAGAGCAC
ACCGACATGAAACCATCATT

Product: 50S ribosomal protein L40e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MRFPEAEARLLNVKVCMKCNARNAVRATTCRKCGSTSLRPKNKERKA

Sequences:

>Translated_47_residues
MRFPEAEARLLNVKVCMKCNARNAVRATTCRKCGSTSLRPKNKERKA
>Mature_47_residues
MRFPEAEARLLNVKVCMKCNARNAVRATTCRKCGSTSLRPKNKERKA

Specific function: Unknown

COG id: COG1552

COG function: function code J; Ribosomal protein L40E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L40e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001975 [H]

Pfam domain/function: PF01020 Ribosomal_L40e [H]

EC number: NA

Molecular weight: Translated: 5338; Mature: 5338

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
12.8 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPEAEARLLNVKVCMKCNARNAVRATTCRKCGSTSLRPKNKERKA
CCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFPEAEARLLNVKVCMKCNARNAVRATTCRKCGSTSLRPKNKERKA
CCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA