| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485377
Identifier: 124485377
GI number: 124485377
Start: 526050
End: 526496
Strand: Reverse
Name: 124485377
Synonym: Mlab_0552
Alternate gene names: NA
Gene position: 526496-526050 (Counterclockwise)
Preceding gene: 124485378
Following gene: 124485376
Centisome position: 29.17
GC content: 54.81
Gene sequence:
>447_bases ATGGCAAAAGTATTCATCTACCCGGCAACCAGCCTCATCTTATCCGACCTTGTAGCGAGGTTCGGCCACGAACCGCTCGG CTCGGCTCTTTCGATCCGCGAACATGTCCAGACACCGGGATTCGATTCACCGCCTATCCAGATGACCTCGGAGGACCCGC AGAAAGGACTGAAATGGGCGGCGGTCGAGGTCCCGTCAGGCATCCGGGGACGAATGGCCCTCTACGGCCCCTTAGTCGAA GAGGCGGAGGCGGCCATTATCATCGACGAGCCGGATCTTGCATTCGGATGCATGGGATGCGCACGAACGAACGAGCTTTT AGTGTTCATGCTCAGGGAAAAGGAGATGCCCAAACTGGAACTGAGATATCCGGCATCCAAAGAAGAGGGCGTGACGTTCG TTGCAAAAATCAAACAGTTCTTAAACGAGCTGGAGGTCAAAAAATGA
Upstream 100 bases:
>100_bases TGAACAAAACCTCACTCAAAAAAGCCGCAGGGGAAACTCTGCCGCTTGAAGAACCGCTCGACGCGGATCTGCTCGAGAAA CTTTTTTCGGAGGAAACATA
Downstream 100 bases:
>100_bases GCGCAAAAGAACAACCCGTACGGATCGCCCAGATCACCTGCGGCGCAGAATACAGTGGAATCCAAAACGAAATCACTTCG GCGGCGGAGACCGTCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWAAVEVPSGIRGRMALYGPLVE EAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLELRYPASKEEGVTFVAKIKQFLNELEVKK
Sequences:
>Translated_148_residues MAKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWAAVEVPSGIRGRMALYGPLVE EAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLELRYPASKEEGVTFVAKIKQFLNELEVKK >Mature_147_residues AKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWAAVEVPSGIRGRMALYGPLVEE AEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLELRYPASKEEGVTFVAKIKQFLNELEVKK
Specific function: Unknown
COG id: COG4050
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012356 [H]
Pfam domain/function: PF09885 DUF2112 [H]
EC number: NA
Molecular weight: Translated: 16405; Mature: 16274
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWA CCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEE AVEVPSGIRGRMALYGPLVEEAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLE EEECCCCCCCCCHHHCCHHHCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCEEE LRYPASKEEGVTFVAKIKQFLNELEVKK EECCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWA CEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEE AVEVPSGIRGRMALYGPLVEEAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLE EEECCCCCCCCCHHHCCHHHCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCEEE LRYPASKEEGVTFVAKIKQFLNELEVKK EECCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]