The gene/protein map for NC_008942 is currently unavailable.
Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485377

Identifier: 124485377

GI number: 124485377

Start: 526050

End: 526496

Strand: Reverse

Name: 124485377

Synonym: Mlab_0552

Alternate gene names: NA

Gene position: 526496-526050 (Counterclockwise)

Preceding gene: 124485378

Following gene: 124485376

Centisome position: 29.17

GC content: 54.81

Gene sequence:

>447_bases
ATGGCAAAAGTATTCATCTACCCGGCAACCAGCCTCATCTTATCCGACCTTGTAGCGAGGTTCGGCCACGAACCGCTCGG
CTCGGCTCTTTCGATCCGCGAACATGTCCAGACACCGGGATTCGATTCACCGCCTATCCAGATGACCTCGGAGGACCCGC
AGAAAGGACTGAAATGGGCGGCGGTCGAGGTCCCGTCAGGCATCCGGGGACGAATGGCCCTCTACGGCCCCTTAGTCGAA
GAGGCGGAGGCGGCCATTATCATCGACGAGCCGGATCTTGCATTCGGATGCATGGGATGCGCACGAACGAACGAGCTTTT
AGTGTTCATGCTCAGGGAAAAGGAGATGCCCAAACTGGAACTGAGATATCCGGCATCCAAAGAAGAGGGCGTGACGTTCG
TTGCAAAAATCAAACAGTTCTTAAACGAGCTGGAGGTCAAAAAATGA

Upstream 100 bases:

>100_bases
TGAACAAAACCTCACTCAAAAAAGCCGCAGGGGAAACTCTGCCGCTTGAAGAACCGCTCGACGCGGATCTGCTCGAGAAA
CTTTTTTCGGAGGAAACATA

Downstream 100 bases:

>100_bases
GCGCAAAAGAACAACCCGTACGGATCGCCCAGATCACCTGCGGCGCAGAATACAGTGGAATCCAAAACGAAATCACTTCG
GCGGCGGAGACCGTCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWAAVEVPSGIRGRMALYGPLVE
EAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLELRYPASKEEGVTFVAKIKQFLNELEVKK

Sequences:

>Translated_148_residues
MAKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWAAVEVPSGIRGRMALYGPLVE
EAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLELRYPASKEEGVTFVAKIKQFLNELEVKK
>Mature_147_residues
AKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWAAVEVPSGIRGRMALYGPLVEE
AEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLELRYPASKEEGVTFVAKIKQFLNELEVKK

Specific function: Unknown

COG id: COG4050

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012356 [H]

Pfam domain/function: PF09885 DUF2112 [H]

EC number: NA

Molecular weight: Translated: 16405; Mature: 16274

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWA
CCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEE
AVEVPSGIRGRMALYGPLVEEAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLE
EEECCCCCCCCCHHHCCHHHCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCEEE
LRYPASKEEGVTFVAKIKQFLNELEVKK
EECCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKVFIYPATSLILSDLVARFGHEPLGSALSIREHVQTPGFDSPPIQMTSEDPQKGLKWA
CEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEE
AVEVPSGIRGRMALYGPLVEEAEAAIIIDEPDLAFGCMGCARTNELLVFMLREKEMPKLE
EEECCCCCCCCCHHHCCHHHCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCCEEE
LRYPASKEEGVTFVAKIKQFLNELEVKK
EECCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]