| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485378
Identifier: 124485378
GI number: 124485378
Start: 526496
End: 526957
Strand: Reverse
Name: 124485378
Synonym: Mlab_0553
Alternate gene names: NA
Gene position: 526957-526496 (Counterclockwise)
Preceding gene: 124485379
Following gene: 124485377
Centisome position: 29.19
GC content: 52.81
Gene sequence:
>462_bases GTGAAACCCTATGTTCCAGAGTATGTCGGGACCGTAACGAAGTACGTTTTCGTTGACTCTCCAAACACAACGCCTCAGGA CATCGCGACCGCCGCATACGAGATCGCTCAGGGTGTGATGATCAAAGAGACCTGTTTCGGATGTCAGATCACCGGATCTC CCGAGGATGTCGACCGGATCATCTCGCATCTGCGTGTTCTCGATCCCTACCGGATCTTCATAAAAGACCGGGGATTTCCC CCGGGAGATTCCCGGAGATGCAGGGCGGATCTTGGCGGCGCCAGACCCGGGTATCTCGGGCACGAATATGAAATGAGTTT TATCAGATATATCTCCCACGGACTGGAAGAGACCGAAGGGATGAACAAAACCTCACTCAAAAAAGCCGCAGGGGAAACTC TGCCGCTTGAAGAACCGCTCGACGCGGATCTGCTCGAGAAACTTTTTTCGGAGGAAACATAA
Upstream 100 bases:
>100_bases AACCTTTTGGAGGAACGAACATTATCGGGAAGGTTCTCGATATGGATAAATTATCCATGATGAAAGAGGGCGGGACCGTC TACATCAGGGAGGTGAAAGA
Downstream 100 bases:
>100_bases TGGCAAAAGTATTCATCTACCCGGCAACCAGCCTCATCTTATCCGACCTTGTAGCGAGGTTCGGCCACGAACCGCTCGGC TCGGCTCTTTCGATCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKPYVPEYVGTVTKYVFVDSPNTTPQDIATAAYEIAQGVMIKETCFGCQITGSPEDVDRIISHLRVLDPYRIFIKDRGFP PGDSRRCRADLGGARPGYLGHEYEMSFIRYISHGLEETEGMNKTSLKKAAGETLPLEEPLDADLLEKLFSEET
Sequences:
>Translated_153_residues MKPYVPEYVGTVTKYVFVDSPNTTPQDIATAAYEIAQGVMIKETCFGCQITGSPEDVDRIISHLRVLDPYRIFIKDRGFP PGDSRRCRADLGGARPGYLGHEYEMSFIRYISHGLEETEGMNKTSLKKAAGETLPLEEPLDADLLEKLFSEET >Mature_153_residues MKPYVPEYVGTVTKYVFVDSPNTTPQDIATAAYEIAQGVMIKETCFGCQITGSPEDVDRIISHLRVLDPYRIFIKDRGFP PGDSRRCRADLGGARPGYLGHEYEMSFIRYISHGLEETEGMNKTSLKKAAGETLPLEEPLDADLLEKLFSEET
Specific function: Unknown
COG id: COG4029
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012025 [H]
Pfam domain/function: PF09875 DUF2102 [H]
EC number: NA
Molecular weight: Translated: 17125; Mature: 17125
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYVPEYVGTVTKYVFVDSPNTTPQDIATAAYEIAQGVMIKETCFGCQITGSPEDVDRI CCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHHHHCCCCEECCCHHHHHHH ISHLRVLDPYRIFIKDRGFPPGDSRRCRADLGGARPGYLGHEYEMSFIRYISHGLEETEG HHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC MNKTSLKKAAGETLPLEEPLDADLLEKLFSEET CCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKPYVPEYVGTVTKYVFVDSPNTTPQDIATAAYEIAQGVMIKETCFGCQITGSPEDVDRI CCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHHHHCCCCEECCCHHHHHHH ISHLRVLDPYRIFIKDRGFPPGDSRRCRADLGGARPGYLGHEYEMSFIRYISHGLEETEG HHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC MNKTSLKKAAGETLPLEEPLDADLLEKLFSEET CCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]