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The map label for this gene is spsC [H]

Identifier: 124265800

GI number: 124265800

Start: 638907

End: 640073

Strand: Direct

Name: spsC [H]

Synonym: Mpe_A0607

Alternate gene names: 124265800

Gene position: 638907-640073 (Clockwise)

Preceding gene: 124265799

Following gene: 124265801

Centisome position: 15.8

GC content: 71.98

Gene sequence:

>1167_bases
ATGACCGCGCCGCCCTTCCTGCCCTTCGCGCTGCCCGAGATCGGCGAGGAGGAGATCGCCGAGGTCGTCGACACGCTGCG
CTCGGGCTGGGTCACCACCGGGCCGAAGGCGCGGCGCTTCGAGCAGGACTTCGCGGCCTTCCTCGGCGATCCGACGCTGC
AGGCCATCGCCGTCAACTCCGCCACCGCCGGCCTGCACCTCGCGCTCGAGGCGCTGGGCATCGGCCCGGGCGACGAGGTC
ATCACCACCACCCACACCTTCACCGCCACGGCCGAGGTGGTGCGCTACCTCGGCGCCGACGTGGTGCTGGTCGACATCGA
CCCGGCCACGCTGAACATCGACCCGGCCCGGGTCGAGGCCGCGATCACGCCGCGCACCCGCGCCATCATCCCCGTCCACT
ACGCCGGCCTCGCGGCGAACGTGGACGCGATCCTCACCCTGGCGCGCTGCCACGGCCTGAAGGTGGTGGAGGACGCGGCG
CACGCGCTGCCCACCACCTGCGGCGGCGCGCTGGTCGGCACGCTGGGCAGCGACGCCACGGTGTTCAGCTTCTACGCCAA
CAAGACCATCACCACCGGCGAGGGCGGCATGGTGGTCACGCGCGACCCGGAGCTCGCGAAGCGCGTGAAGGTGATGCGCC
TGCACGGCATCAGCCGCGATGCCTTCGACCGCTTCACCGCCAAGACGCCGAGCTGGCACTACGAGATCGTCGCGCCGGGC
TACAAGTACAACCTCACCGACATCGCCGCGGCGCTGGGCATCCACCAGCTCCAGCGCGCACGCGGCTTCCAGCAGCGCCG
GGCGGCGATCGCGCAGCGCTACCGCGCCGCCTTCGCCGACCTGCCGGTGCAGCTGCCGCCCGAGCCTGCGGCCGGCGAGC
TGCACGCCTGGCACCTCTACGTGCTGCGGCTGGCCGACGCGGCACCGCTGGCGCGCGACGCCTTCATCGAGCGGCTGTTC
GCGCTGGGCATCGGCGTCAGCGTGCACTACATCCCGCTGCACCTGCACCCCTACTGGCGCGAGCGCTACGGCCTGGATGC
GGCGCAGTTCCCCCACAGCCAGCACGCCTACGAACGCATGCTGAGCCTGCCGCTGTACACGAAGATGAGCGAGGCGGACA
TCGAGCGCGTGATCGCGGCCGTGCGGCAGCAGCTGCTGCAGGGCTGA

Upstream 100 bases:

>100_bases
CGCTGCGCACGCCGCTGGTGTTCGACGGGCGCAACCTGTTCGAGCCGGCGCTGATGAAGCAGCTCGGCATCGAGTACCAC
GCGATCGGCCGCCCGAGCGC

Downstream 100 bases:

>100_bases
CCGGGCGCGGGTCCGGCATGGCCAAGCGACTGGTCGATCTGGTGTTCGCGGTGGGCGGCCTGCTGCTGCTGTCGCCGCTG
CTGCTGCTGACCGCGCTGGC

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTAPPFLPFALPEIGEEEIAEVVDTLRSGWVTTGPKARRFEQDFAAFLGDPTLQAIAVNSATAGLHLALEALGIGPGDEV
ITTTHTFTATAEVVRYLGADVVLVDIDPATLNIDPARVEAAITPRTRAIIPVHYAGLAANVDAILTLARCHGLKVVEDAA
HALPTTCGGALVGTLGSDATVFSFYANKTITTGEGGMVVTRDPELAKRVKVMRLHGISRDAFDRFTAKTPSWHYEIVAPG
YKYNLTDIAAALGIHQLQRARGFQQRRAAIAQRYRAAFADLPVQLPPEPAAGELHAWHLYVLRLADAAPLARDAFIERLF
ALGIGVSVHYIPLHLHPYWRERYGLDAAQFPHSQHAYERMLSLPLYTKMSEADIERVIAAVRQQLLQG

Sequences:

>Translated_388_residues
MTAPPFLPFALPEIGEEEIAEVVDTLRSGWVTTGPKARRFEQDFAAFLGDPTLQAIAVNSATAGLHLALEALGIGPGDEV
ITTTHTFTATAEVVRYLGADVVLVDIDPATLNIDPARVEAAITPRTRAIIPVHYAGLAANVDAILTLARCHGLKVVEDAA
HALPTTCGGALVGTLGSDATVFSFYANKTITTGEGGMVVTRDPELAKRVKVMRLHGISRDAFDRFTAKTPSWHYEIVAPG
YKYNLTDIAAALGIHQLQRARGFQQRRAAIAQRYRAAFADLPVQLPPEPAAGELHAWHLYVLRLADAAPLARDAFIERLF
ALGIGVSVHYIPLHLHPYWRERYGLDAAQFPHSQHAYERMLSLPLYTKMSEADIERVIAAVRQQLLQG
>Mature_387_residues
TAPPFLPFALPEIGEEEIAEVVDTLRSGWVTTGPKARRFEQDFAAFLGDPTLQAIAVNSATAGLHLALEALGIGPGDEVI
TTTHTFTATAEVVRYLGADVVLVDIDPATLNIDPARVEAAITPRTRAIIPVHYAGLAANVDAILTLARCHGLKVVEDAAH
ALPTTCGGALVGTLGSDATVFSFYANKTITTGEGGMVVTRDPELAKRVKVMRLHGISRDAFDRFTAKTPSWHYEIVAPGY
KYNLTDIAAALGIHQLQRARGFQQRRAAIAQRYRAAFADLPVQLPPEPAAGELHAWHLYVLRLADAAPLARDAFIERLFA
LGIGVSVHYIPLHLHPYWRERYGLDAAQFPHSQHAYERMLSLPLYTKMSEADIERVIAAVRQQLLQG

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=380, Percent_Identity=45.2631578947368, Blast_Score=308, Evalue=5e-85,
Organism=Escherichia coli, GI2367285, Length=382, Percent_Identity=35.3403141361257, Blast_Score=191, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42246; Mature: 42115

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPPFLPFALPEIGEEEIAEVVDTLRSGWVTTGPKARRFEQDFAAFLGDPTLQAIAVNS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
ATAGLHLALEALGIGPGDEVITTTHTFTATAEVVRYLGADVVLVDIDPATLNIDPARVEA
CCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEEECCCEECCCHHHEEE
AITPRTRAIIPVHYAGLAANVDAILTLARCHGLKVVEDAAHALPTTCGGALVGTLGSDAT
EECCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHEECCCCCCE
VFSFYANKTITTGEGGMVVTRDPELAKRVKVMRLHGISRDAFDRFTAKTPSWHYEIVAPG
EEEEEECCEEEECCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCC
YKYNLTDIAAALGIHQLQRARGFQQRRAAIAQRYRAAFADLPVQLPPEPAAGELHAWHLY
CEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEE
VLRLADAAPLARDAFIERLFALGIGVSVHYIPLHLHPYWRERYGLDAAQFPHSQHAYERM
EEHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHCCCHHHCCCHHHHHHHH
LSLPLYTKMSEADIERVIAAVRQQLLQG
HHCCHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAPPFLPFALPEIGEEEIAEVVDTLRSGWVTTGPKARRFEQDFAAFLGDPTLQAIAVNS
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
ATAGLHLALEALGIGPGDEVITTTHTFTATAEVVRYLGADVVLVDIDPATLNIDPARVEA
CCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEEECCCEECCCHHHEEE
AITPRTRAIIPVHYAGLAANVDAILTLARCHGLKVVEDAAHALPTTCGGALVGTLGSDAT
EECCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHEECCCCCCE
VFSFYANKTITTGEGGMVVTRDPELAKRVKVMRLHGISRDAFDRFTAKTPSWHYEIVAPG
EEEEEECCEEEECCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCC
YKYNLTDIAAALGIHQLQRARGFQQRRAAIAQRYRAAFADLPVQLPPEPAAGELHAWHLY
CEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEE
VLRLADAAPLARDAFIERLFALGIGVSVHYIPLHLHPYWRERYGLDAAQFPHSQHAYERM
EEHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHCCCHHHCCCHHHHHHHH
LSLPLYTKMSEADIERVIAAVRQQLLQG
HHCCHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]