Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is mcp [H]
Identifier: 124265779
GI number: 124265779
Start: 614944
End: 616698
Strand: Direct
Name: mcp [H]
Synonym: Mpe_A0586
Alternate gene names: 124265779
Gene position: 614944-616698 (Clockwise)
Preceding gene: 124265778
Following gene: 124265780
Centisome position: 15.21
GC content: 70.2
Gene sequence:
>1755_bases ATGAAACTCGACCAACTGAAGATCGGCGCCCGACTCGGGGCAGGCTTCGGCACCGTGCTGTTGTTGCTGGTGCTGATCGT CATGCTCTCGTTCTCGCGACTCGTGATGACCGAGCGGGGCTTCGACAGCGCGCTCGACGTGGAGCATCGCGTGGCGCGGG CCGACGAATGGAAGAACCTGACCACGCTCAACGTCAGCCGCACCATCGCGATCGTGAAGTCGGGCGGCCTGCCGCAGATG AGCGCGTTCCTCACGCCGCAGATGAAGGACACCAGCGAGCAGATCACGCGCGTGCAGAAGGAACTGGAGGCCGAGCTGAG CCATGAGCGCAGCAAGGCACTGTTCGCCGACATCTCCGGCAAGCGCAAGGCCTACATCGACCAGCGCGAAGCGGCGCTGG CACTGCTGAAGGCCGGCGACGTCACGGCGGTCGAGCTGCTCCTGGAGAAGAGCCTGCTGCCGGCCTCCAAGGTCTACCTG GCGGCCATCGAGGACTTCAGCAACTTTGAGCGCGAGCTGGCCGTGCAGAGCGCCGCTGCGGTGAAGGCCGACGTGCAGCG CAGCAAGCTGATGCTGCTGGTGCTGGCCGGTGTGTCCATCGTCCTCGGCAGCCTGAGCGCCTGGGTCCTGACCCGGTCGG TGACGGCGCCGCTGCGCCGCGCTGCGGCCAGCACGCAGGCGATCGCCGCCGGCGACCTGTCGCAGCCCATCGAGGCCACG GGCCGCGACGAGGTGGCCGACCTGCAGCGCAGCCTGGGCAAGATGCAGACCTCGCTGCGCGACATGGTGAGTGCGGTGCG CCTGAGCACCGACAGCATCACCACCGCCAGCAGCGAGATCGCGACCGGCAACCAGGACCTCAGCGCCCGCACCGAACAGA CCGCGAGCAACCTGCAGGAAACCGCGAGCTCGATGGAGCAGCTCACCGGCACGGTCAAGCAGACCGCCGAGTCCGCCCGC ACCGCCAACCAGCTCGCGTCGTCGGCCCAGGCCACGGCGGCCAAGGGCGGCCAGGTGGTGTCGCAGGTCGTGTCGACGAT GGACGACATCAACGCGAGCAGCAAGAAGATCGCCGACATCATCGGCGTGATCGACGGCATCGCCTTCCAGACCAACATCC TGGCGCTCAACGCGGCGGTGGAAGCCGCCCGTGCCGGCGAGCAGGGCCGCGGCTTCGCGGTGGTGGCCGGCGAGGTGCGC AACCTGGCGCAGCGAAGCGCCCAGGCCGCCAAGGAGATCAAGGACCTGATCGGCGCGAGCGTCGAGCGGGTCGAGTCGGG CAGCAAGCTGGTGGCCGATGCCGGCCGCACGATGAGCGAGATCGTGGGTTCGGTGCAGCGTGTGTCCGACATCATCTGCG AGATCACGGCCGCCGCCGCCGAGCAGTCGGACGGCATCGGCCAGGTCAACACCGCGGTGACCAACCTCGACCAGATGACG CAGCAGAACGCCGCGCTGGTGGAGGAGAGCGCCGCCGCCGCCGAGAGCCTGAAGGACCAGGCGATCCGTCTGGCCGCTTC GGTCTCGGTGTTCCGCGTCGATGCGCATGCCACGGTGTCGCGGCCGGCCGCTGCCACGCCGAGCCTGCCCGCGCCCAGCG CGCCGCGCGCACCGGTGCAGGCCGCGCCGGCACCCCAGCGCGCCGCCAAGGCGCCGCCGGTGCTGCGCGATGCCGTGGCC GCCGCCGGGCCGGCCCCGGTCGTGGCGGCTGCCGCGGCGACCGCCACGCCGGGCGACGACTGGGAAACCTTCTGA
Upstream 100 bases:
>100_bases TCGCCCTCATCCTCGACGTGGGATCGCTGGTGCGGCGCTCGCGCCACTGAGGGGCCGTCTCCGCCCGAACCGATTCCCGC TCTCCCGGAAAGACTCCAAG
Downstream 100 bases:
>100_bases TCCGGGTCCGGATGCGCACGCAGGCCTTCAGTCCGCGCCGCAACTGCCGTAAACCACTCTGACATCCCGCGCAGCGCCGC GTCCGCGGCGCTCCGACACC
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MKLDQLKIGARLGAGFGTVLLLLVLIVMLSFSRLVMTERGFDSALDVEHRVARADEWKNLTTLNVSRTIAIVKSGGLPQM SAFLTPQMKDTSEQITRVQKELEAELSHERSKALFADISGKRKAYIDQREAALALLKAGDVTAVELLLEKSLLPASKVYL AAIEDFSNFERELAVQSAAAVKADVQRSKLMLLVLAGVSIVLGSLSAWVLTRSVTAPLRRAAASTQAIAAGDLSQPIEAT GRDEVADLQRSLGKMQTSLRDMVSAVRLSTDSITTASSEIATGNQDLSARTEQTASNLQETASSMEQLTGTVKQTAESAR TANQLASSAQATAAKGGQVVSQVVSTMDDINASSKKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR NLAQRSAQAAKEIKDLIGASVERVESGSKLVADAGRTMSEIVGSVQRVSDIICEITAAAAEQSDGIGQVNTAVTNLDQMT QQNAALVEESAAAAESLKDQAIRLAASVSVFRVDAHATVSRPAAATPSLPAPSAPRAPVQAAPAPQRAAKAPPVLRDAVA AAGPAPVVAAAAATATPGDDWETF
Sequences:
>Translated_584_residues MKLDQLKIGARLGAGFGTVLLLLVLIVMLSFSRLVMTERGFDSALDVEHRVARADEWKNLTTLNVSRTIAIVKSGGLPQM SAFLTPQMKDTSEQITRVQKELEAELSHERSKALFADISGKRKAYIDQREAALALLKAGDVTAVELLLEKSLLPASKVYL AAIEDFSNFERELAVQSAAAVKADVQRSKLMLLVLAGVSIVLGSLSAWVLTRSVTAPLRRAAASTQAIAAGDLSQPIEAT GRDEVADLQRSLGKMQTSLRDMVSAVRLSTDSITTASSEIATGNQDLSARTEQTASNLQETASSMEQLTGTVKQTAESAR TANQLASSAQATAAKGGQVVSQVVSTMDDINASSKKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR NLAQRSAQAAKEIKDLIGASVERVESGSKLVADAGRTMSEIVGSVQRVSDIICEITAAAAEQSDGIGQVNTAVTNLDQMT QQNAALVEESAAAAESLKDQAIRLAASVSVFRVDAHATVSRPAAATPSLPAPSAPRAPVQAAPAPQRAAKAPPVLRDAVA AAGPAPVVAAAAATATPGDDWETF >Mature_584_residues MKLDQLKIGARLGAGFGTVLLLLVLIVMLSFSRLVMTERGFDSALDVEHRVARADEWKNLTTLNVSRTIAIVKSGGLPQM SAFLTPQMKDTSEQITRVQKELEAELSHERSKALFADISGKRKAYIDQREAALALLKAGDVTAVELLLEKSLLPASKVYL AAIEDFSNFERELAVQSAAAVKADVQRSKLMLLVLAGVSIVLGSLSAWVLTRSVTAPLRRAAASTQAIAAGDLSQPIEAT GRDEVADLQRSLGKMQTSLRDMVSAVRLSTDSITTASSEIATGNQDLSARTEQTASNLQETASSMEQLTGTVKQTAESAR TANQLASSAQATAAKGGQVVSQVVSTMDDINASSKKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR NLAQRSAQAAKEIKDLIGASVERVESGSKLVADAGRTMSEIVGSVQRVSDIICEITAAAAEQSDGIGQVNTAVTNLDQMT QQNAALVEESAAAAESLKDQAIRLAASVSVFRVDAHATVSRPAAATPSLPAPSAPRAPVQAAPAPQRAAKAPPVLRDAVA AAGPAPVVAAAAATATPGDDWETF
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=334, Percent_Identity=59.5808383233533, Blast_Score=330, Evalue=2e-91, Organism=Escherichia coli, GI2367378, Length=348, Percent_Identity=58.6206896551724, Blast_Score=329, Evalue=3e-91, Organism=Escherichia coli, GI1788194, Length=333, Percent_Identity=54.3543543543543, Blast_Score=319, Evalue=3e-88, Organism=Escherichia coli, GI1787690, Length=417, Percent_Identity=47.0023980815348, Blast_Score=316, Evalue=2e-87, Organism=Escherichia coli, GI1789453, Length=321, Percent_Identity=41.1214953271028, Blast_Score=233, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR003122 - InterPro: IPR004091 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 60894; Mature: 60894
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDQLKIGARLGAGFGTVLLLLVLIVMLSFSRLVMTERGFDSALDVEHRVARADEWKNL CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TTLNVSRTIAIVKSGGLPQMSAFLTPQMKDTSEQITRVQKELEAELSHERSKALFADISG EEEEHHHEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KRKAYIDQREAALALLKAGDVTAVELLLEKSLLPASKVYLAAIEDFSNFERELAVQSAAA CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKADVQRSKLMLLVLAGVSIVLGSLSAWVLTRSVTAPLRRAAASTQAIAAGDLSQPIEAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC GRDEVADLQRSLGKMQTSLRDMVSAVRLSTDSITTASSEIATGNQDLSARTEQTASNLQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHH TASSMEQLTGTVKQTAESARTANQLASSAQATAAKGGQVVSQVVSTMDDINASSKKIADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKDLIGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VERVESGSKLVADAGRTMSEIVGSVQRVSDIICEITAAAAEQSDGIGQVNTAVTNLDQMT HHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QQNAALVEESAAAAESLKDQAIRLAASVSVFRVDAHATVSRPAAATPSLPAPSAPRAPVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCC AAPAPQRAAKAPPVLRDAVAAAGPAPVVAAAAATATPGDDWETF CCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKLDQLKIGARLGAGFGTVLLLLVLIVMLSFSRLVMTERGFDSALDVEHRVARADEWKNL CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TTLNVSRTIAIVKSGGLPQMSAFLTPQMKDTSEQITRVQKELEAELSHERSKALFADISG EEEEHHHEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KRKAYIDQREAALALLKAGDVTAVELLLEKSLLPASKVYLAAIEDFSNFERELAVQSAAA CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKADVQRSKLMLLVLAGVSIVLGSLSAWVLTRSVTAPLRRAAASTQAIAAGDLSQPIEAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC GRDEVADLQRSLGKMQTSLRDMVSAVRLSTDSITTASSEIATGNQDLSARTEQTASNLQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHH TASSMEQLTGTVKQTAESARTANQLASSAQATAAKGGQVVSQVVSTMDDINASSKKIADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKDLIGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VERVESGSKLVADAGRTMSEIVGSVQRVSDIICEITAAAAEQSDGIGQVNTAVTNLDQMT HHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QQNAALVEESAAAAESLKDQAIRLAASVSVFRVDAHATVSRPAAATPSLPAPSAPRAPVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCC AAPAPQRAAKAPPVLRDAVAAAGPAPVVAAAAATATPGDDWETF CCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2496104 [H]