Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265754
Identifier: 124265754
GI number: 124265754
Start: 593678
End: 594124
Strand: Direct
Name: 124265754
Synonym: Mpe_A0561
Alternate gene names: NA
Gene position: 593678-594124 (Clockwise)
Preceding gene: 124265753
Following gene: 124265755
Centisome position: 14.68
GC content: 68.01
Gene sequence:
>447_bases ATGGGAAGCAAGGAATCGGTTGCCACGCTGAGTGGCGTGCTGGTTGCAACGGCACTGGTCCTTTTGCCGGCGCTTCGCGT CTCCGCGGCTGAAAGTGGCTCGGGGGCAGCGCGCGACGGCGGTGCGCTCGTCATGGCCAGCTGCGTGGAGGGCAGTCCGC CGCTGGTCTTCGCCAGGGCCGACCCGCGCGCGCTGCTGGATCCCGAAGATCGCGAACGATTCCAGGGCGCGGCCTTGTCG CTCTACCGCGTGCTCGACCGCAGCGCGTTCGCGCCGGTGCAGATCATGCTGTGGGACAAGGGGCCGGGAGAGTGGGTGTA CGTGAGCGTGCTGCCGGTCGACGGCGATGCGCAGCGGTCGTGTTTCACGGCCACCTTCACCGCCGAACCCTTCGAGTTCA CGCCCGCGCTGATCCGCAAGTACTTTCCAGGCGCCAGCCGCACTTGA
Upstream 100 bases:
>100_bases ATAGAACGAGGCGCCGTCGCTGGAGTGACTCCTCATTGCTTTCTCCGGTGCCGCGGCCGAAGATCGATCGACGAGGGGAT CTGCTGGCGGAGGGCGCGCG
Downstream 100 bases:
>100_bases TGCGGTGCCGGACCTAGTTGGGCCGGGCCGTGCGCGGTTACTCGGTCGAGGAGACAATGCGCCGTTGTCGGGCTGCTCAT CGCAGCGTGACGGCTTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGSKESVATLSGVLVATALVLLPALRVSAAESGSGAARDGGALVMASCVEGSPPLVFARADPRALLDPEDRERFQGAALS LYRVLDRSAFAPVQIMLWDKGPGEWVYVSVLPVDGDAQRSCFTATFTAEPFEFTPALIRKYFPGASRT
Sequences:
>Translated_148_residues MGSKESVATLSGVLVATALVLLPALRVSAAESGSGAARDGGALVMASCVEGSPPLVFARADPRALLDPEDRERFQGAALS LYRVLDRSAFAPVQIMLWDKGPGEWVYVSVLPVDGDAQRSCFTATFTAEPFEFTPALIRKYFPGASRT >Mature_147_residues GSKESVATLSGVLVATALVLLPALRVSAAESGSGAARDGGALVMASCVEGSPPLVFARADPRALLDPEDRERFQGAALSL YRVLDRSAFAPVQIMLWDKGPGEWVYVSVLPVDGDAQRSCFTATFTAEPFEFTPALIRKYFPGASRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15679; Mature: 15548
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKESVATLSGVLVATALVLLPALRVSAAESGSGAARDGGALVMASCVEGSPPLVFARA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEC DPRALLDPEDRERFQGAALSLYRVLDRSAFAPVQIMLWDKGPGEWVYVSVLPVDGDAQRS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC CFTATFTAEPFEFTPALIRKYFPGASRT EEEEEEECCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure GSKESVATLSGVLVATALVLLPALRVSAAESGSGAARDGGALVMASCVEGSPPLVFARA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEC DPRALLDPEDRERFQGAALSLYRVLDRSAFAPVQIMLWDKGPGEWVYVSVLPVDGDAQRS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC CFTATFTAEPFEFTPALIRKYFPGASRT EEEEEEECCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA