Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is glmS [H]
Identifier: 124265753
GI number: 124265753
Start: 591719
End: 593578
Strand: Direct
Name: glmS [H]
Synonym: Mpe_A0560
Alternate gene names: 124265753
Gene position: 591719-593578 (Clockwise)
Preceding gene: 124265751
Following gene: 124265754
Centisome position: 14.63
GC content: 69.3
Gene sequence:
>1860_bases ATGTGCGGCATCGTCGGCGCGGTCGGTACACGCAACATCGTTCCCATCCTCGTCGAAGGCCTGAAGCGGCTCGAGTACCG GGGCTACGACTCCTGCGGCGTCGCGGTGCACCAGGACGGCGCGCTGCGACGCAGCCGCAGTACGTCGCGCGTTGCGGAAC TCGACGTGCAAGTGACCGCCGACGCGGTGCAGGGAACGACCGGCATTGCCCACACGCGCTGGGCCACGCACGGTGCGCCG GCGGTGCACAACGCCCATCCGCATTTCTCCAGCGGCCCGGGCGCCGACGCCGCGCGTCCGGCGCGCATCGCCCTCGTGCA CAACGGCATCATCGAGAACCATGACGACCTGCGTGCCGAGCTGCAGGCGCGCGGCTATGTCTTCGCGAGCCAGACCGACA CCGAGGTCATCGCCCACCTGATCGACTCGCTGTACGACGGCGACCTGTTCGACGCCGTACAGCAGGCCACGCAGCGGCTC AAGGGCGCCTACGCGATCGCCGTGTTCTGCCGCGACGAACCGCACCGCGTGGTGGGTGCGCGAGAAGGCTCGCCGCTGAT CCTGGGCGTGGGGCAGGGCGAGAGCTTCCTCGCGTCGGACGCGATGGCGCTGGCCGGCGTGACCGACCAGATCGTCTACC TGGAAGAGGGCGACGTGGTCGACCTCCAGCTCGGCAAGCACTGGATTGTGGCGCGCAATGCCGCGACCGGCCGCCACGAG CGCGTGCAGCGCGAAGTGCGCACCGTGCATGCCCACACCGGCGCGGCCGAGCTCGGGCCCTACCGCCACTACATGCAGAA GGAGATCTTCGAGCAACCGCGCGCCATCGCCGACACGCTCGAGGGCGTGCAGGGCATCGTGCCGGAGCTGTTCGGCGACG GCGCGCACCGGGTGTTCAAGGAGATCGATTCGGTCCTGATCCTGGCCTGCGGCACCAGCTACTACGCCGGCTGCACCGCC AAGTACTGGCTGGAGTCGATCGCGCAGATCCCCACGCAGGTGGAAGTGGCCAGCGAGTACCGCTACCGCGACAGCGTGCC CAACCCCAAGACGCTCGTCGTCACCATCACGCAGAGCGGCGAGACCGCCGACACGCTGGCCGCGCTGAAGCACGCCCGCT CGCTGGGCATGAAGCACACGCTCACCGTGTGCAACGTCGCCACCAGCGCGATGGTGCGCGAGTGCTCGCTGGCCTACATC ACGCGAGCGGGCGTCGAGATCGGCGTGGCCTCCACCAAGGCCTTCACCACGCAGCTGGCAGGCCTGTTCCTGCTTACGCT GATGCTGGCCAAGACCCGTGGGCGGTTGAGCGAGGACGCCGAGGCCGGGCACCTGAAGGCGCTGCGCCACCTGCCGGTGG CGCTGCAGGCCGTGCTGGCCCTCGAGCCGCAGGTCATGGCCTGGGCGGAAGAGTTCGCCCGCAAGGAGAACGCGCTCTTC CTGGGCCGCGGGCTGCATTACCCGGTGGCGCTGGAAGGCGCGCTCAAGCTCAAGGAGATCAGCTACATCCACGCCGAGGC CTACCCGGCCGGCGAACTGAAGCACGGCCCGCTCGCGCTGGTGACCAGCGCAATGCCGGTCGTCACCGTGGCGCCGCACG ACGCGCTGCTCGAGAAGCTCAAGAGCAACCTGCAGGAAGTGCGCGCGCGGGGCGGCGAGCTGTTCGTCTTTGCCGACGCC GACACGCGGATCGAAAGCAGCGAAGGCGTGCACGTGATCCGCATGCCCGAGCACTACGGCGCCTTGTCGCCGCTGCTGCA CGTGGTGCCGCTGCAGTTGCTGGCCTATCACACGGCCTGCGCGCGCGGCACCGACGTCGACAAGCCGCGCAACCTGGCGA AGAGCGTGACGGTGGAGTGA
Upstream 100 bases:
>100_bases AAGTTTTGAGATTTTTATGCCGTTTTATTTTGAATTTAGAAAGCATATTTGTTGCTGCCGTCCCTAGGATGCGCCATCCA CAGCTCAGCAAGGCCATCTC
Downstream 100 bases:
>100_bases TAGAACGAGGCGCCGTCGCTGGAGTGACTCCTCATTGCTTTCTCCGGTGCCGCGGCCGAAGATCGATCGACGAGGGGATC TGCTGGCGGAGGGCGCGCGA
Product: glutamine--fructose-6-phosphate transaminase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MCGIVGAVGTRNIVPILVEGLKRLEYRGYDSCGVAVHQDGALRRSRSTSRVAELDVQVTADAVQGTTGIAHTRWATHGAP AVHNAHPHFSSGPGADAARPARIALVHNGIIENHDDLRAELQARGYVFASQTDTEVIAHLIDSLYDGDLFDAVQQATQRL KGAYAIAVFCRDEPHRVVGAREGSPLILGVGQGESFLASDAMALAGVTDQIVYLEEGDVVDLQLGKHWIVARNAATGRHE RVQREVRTVHAHTGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAHRVFKEIDSVLILACGTSYYAGCTA KYWLESIAQIPTQVEVASEYRYRDSVPNPKTLVVTITQSGETADTLAALKHARSLGMKHTLTVCNVATSAMVRECSLAYI TRAGVEIGVASTKAFTTQLAGLFLLTLMLAKTRGRLSEDAEAGHLKALRHLPVALQAVLALEPQVMAWAEEFARKENALF LGRGLHYPVALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPHDALLEKLKSNLQEVRARGGELFVFADA DTRIESSEGVHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE
Sequences:
>Translated_619_residues MCGIVGAVGTRNIVPILVEGLKRLEYRGYDSCGVAVHQDGALRRSRSTSRVAELDVQVTADAVQGTTGIAHTRWATHGAP AVHNAHPHFSSGPGADAARPARIALVHNGIIENHDDLRAELQARGYVFASQTDTEVIAHLIDSLYDGDLFDAVQQATQRL KGAYAIAVFCRDEPHRVVGAREGSPLILGVGQGESFLASDAMALAGVTDQIVYLEEGDVVDLQLGKHWIVARNAATGRHE RVQREVRTVHAHTGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAHRVFKEIDSVLILACGTSYYAGCTA KYWLESIAQIPTQVEVASEYRYRDSVPNPKTLVVTITQSGETADTLAALKHARSLGMKHTLTVCNVATSAMVRECSLAYI TRAGVEIGVASTKAFTTQLAGLFLLTLMLAKTRGRLSEDAEAGHLKALRHLPVALQAVLALEPQVMAWAEEFARKENALF LGRGLHYPVALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPHDALLEKLKSNLQEVRARGGELFVFADA DTRIESSEGVHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE >Mature_619_residues MCGIVGAVGTRNIVPILVEGLKRLEYRGYDSCGVAVHQDGALRRSRSTSRVAELDVQVTADAVQGTTGIAHTRWATHGAP AVHNAHPHFSSGPGADAARPARIALVHNGIIENHDDLRAELQARGYVFASQTDTEVIAHLIDSLYDGDLFDAVQQATQRL KGAYAIAVFCRDEPHRVVGAREGSPLILGVGQGESFLASDAMALAGVTDQIVYLEEGDVVDLQLGKHWIVARNAATGRHE RVQREVRTVHAHTGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAHRVFKEIDSVLILACGTSYYAGCTA KYWLESIAQIPTQVEVASEYRYRDSVPNPKTLVVTITQSGETADTLAALKHARSLGMKHTLTVCNVATSAMVRECSLAYI TRAGVEIGVASTKAFTTQLAGLFLLTLMLAKTRGRLSEDAEAGHLKALRHLPVALQAVLALEPQVMAWAEEFARKENALF LGRGLHYPVALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPHDALLEKLKSNLQEVRARGGELFVFADA DTRIESSEGVHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=695, Percent_Identity=35.9712230215827, Blast_Score=386, Evalue=1e-107, Organism=Homo sapiens, GI205277386, Length=699, Percent_Identity=36.0515021459227, Blast_Score=382, Evalue=1e-106, Organism=Escherichia coli, GI1790167, Length=626, Percent_Identity=51.2779552715655, Blast_Score=608, Evalue=1e-175, Organism=Escherichia coli, GI1788651, Length=224, Percent_Identity=25.8928571428571, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17539970, Length=728, Percent_Identity=33.6538461538462, Blast_Score=361, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17532899, Length=731, Percent_Identity=33.1053351573187, Blast_Score=356, Evalue=2e-98, Organism=Caenorhabditis elegans, GI17532897, Length=437, Percent_Identity=37.7574370709382, Blast_Score=278, Evalue=9e-75, Organism=Saccharomyces cerevisiae, GI6322745, Length=459, Percent_Identity=33.9869281045752, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6323731, Length=435, Percent_Identity=28.0459770114943, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6323730, Length=212, Percent_Identity=36.3207547169811, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI21357745, Length=703, Percent_Identity=34.5661450924609, Blast_Score=372, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 66925; Mature: 66925
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVGAVGTRNIVPILVEGLKRLEYRGYDSCGVAVHQDGALRRSRSTSRVAELDVQVTA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCCHHHHHEEEEEEH DAVQGTTGIAHTRWATHGAPAVHNAHPHFSSGPGADAARPARIALVHNGIIENHDDLRAE HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHH LQARGYVFASQTDTEVIAHLIDSLYDGDLFDAVQQATQRLKGAYAIAVFCRDEPHRVVGA HHHCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEC REGSPLILGVGQGESFLASDAMALAGVTDQIVYLEEGDVVDLQLGKHWIVARNAATGRHE CCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCHHH RVQREVRTVHAHTGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAHRVFK HHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHH EIDSVLILACGTSYYAGCTAKYWLESIAQIPTQVEVASEYRYRDSVPNPKTLVVTITQSG HHHHEEEEEECCCHHCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEEEECCC ETADTLAALKHARSLGMKHTLTVCNVATSAMVRECSLAYITRAGVEIGVASTKAFTTQLA CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH GLFLLTLMLAKTRGRLSEDAEAGHLKALRHLPVALQAVLALEPQVMAWAEEFARKENALF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE LGRGLHYPVALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPHDALLEKL EECCCCCCEEECCCEEHHHHHEEEECCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHH KSNLQEVRARGGELFVFADADTRIESSEGVHVIRMPEHYGALSPLLHVVPLQLLAYHTAC HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHH ARGTDVDKPRNLAKSVTVE CCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MCGIVGAVGTRNIVPILVEGLKRLEYRGYDSCGVAVHQDGALRRSRSTSRVAELDVQVTA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCCHHHHHEEEEEEH DAVQGTTGIAHTRWATHGAPAVHNAHPHFSSGPGADAARPARIALVHNGIIENHDDLRAE HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHH LQARGYVFASQTDTEVIAHLIDSLYDGDLFDAVQQATQRLKGAYAIAVFCRDEPHRVVGA HHHCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEC REGSPLILGVGQGESFLASDAMALAGVTDQIVYLEEGDVVDLQLGKHWIVARNAATGRHE CCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCHHH RVQREVRTVHAHTGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAHRVFK HHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHH EIDSVLILACGTSYYAGCTAKYWLESIAQIPTQVEVASEYRYRDSVPNPKTLVVTITQSG HHHHEEEEEECCCHHCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEEEECCC ETADTLAALKHARSLGMKHTLTVCNVATSAMVRECSLAYITRAGVEIGVASTKAFTTQLA CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH GLFLLTLMLAKTRGRLSEDAEAGHLKALRHLPVALQAVLALEPQVMAWAEEFARKENALF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE LGRGLHYPVALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPHDALLEKL EECCCCCCEEECCCEEHHHHHEEEECCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHH KSNLQEVRARGGELFVFADADTRIESSEGVHVIRMPEHYGALSPLLHVVPLQLLAYHTAC HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHH ARGTDVDKPRNLAKSVTVE CCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]