Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is dnaJ [C]

Identifier: 124265751

GI number: 124265751

Start: 590506

End: 591039

Strand: Direct

Name: dnaJ [C]

Synonym: Mpe_A0558

Alternate gene names: 124265751

Gene position: 590506-591039 (Clockwise)

Preceding gene: 124265750

Following gene: 124265753

Centisome position: 14.6

GC content: 68.91

Gene sequence:

>534_bases
ATGCGACGCCCCAAGATTCCCCACTACTACGGCCGCCTGAAGGTGGCGCCCGACGCGCCGCCCGAAGTGATCCGTGCCGC
CTACAAGGCGCTGGTGCAGAAGTACCACCCCGATCGCCATCACGGCAGCGTCCGCCATGAGCTGGTGCTGACGGCCTTGA
ACAAGGCGCAGGACGTGCTGCTCGACCCCGACCGGCGTGCCGCCCACGACCAGTGGATCCGGCGCGAGGAGATTCGCCTG
GGTTATCGCGATCCTGAAGATCAACCGGGACCCGGGTTGCGGGTGCGATTGCAGTTGCTGGCGTCCGGCGTGCGGGAGGG
CGGCTTATCGTTCGGGGAGGCCTGGCTCACCTACCTCACCGGCGCCCAGCGCTTGGCGGTCGGTGCCGTCGGCGTGGTGG
CCCTGGGGCTCGGTCTCGGTGGCCTGGTGGTGATGCTGATGCCGCACGACGACGTGCTGAGCGGATTGACGTCGCCGGCC
GGTCTGCACAAGTCGCTTTCCGCGGCGGAAGGCGCGGCATCCGCGCCGAACTGA

Upstream 100 bases:

>100_bases
GGCACAGTTGCAACAGCGGGGCGCAGCCGATCGTGCCGGTTGCAGACGCGCCAACTCTGCACGACATGCCGTGACATCGC
GCCAGTAGCATCGGAAACCG

Downstream 100 bases:

>100_bases
GGAGTGGTTGCCGCGGGGCGCTCGCCGGTCGGCGCAACTCACCGCGCGGGCAGCGGCAGTTCGCTGCCGAACTTCGCGCG
CTTGATGCTGAAGAAGGCCC

Product: DnaJ-class molecular chaperone

Products: NA

Alternate protein names: Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRRPKIPHYYGRLKVAPDAPPEVIRAAYKALVQKYHPDRHHGSVRHELVLTALNKAQDVLLDPDRRAAHDQWIRREEIRL
GYRDPEDQPGPGLRVRLQLLASGVREGGLSFGEAWLTYLTGAQRLAVGAVGVVALGLGLGGLVVMLMPHDDVLSGLTSPA
GLHKSLSAAEGAASAPN

Sequences:

>Translated_177_residues
MRRPKIPHYYGRLKVAPDAPPEVIRAAYKALVQKYHPDRHHGSVRHELVLTALNKAQDVLLDPDRRAAHDQWIRREEIRL
GYRDPEDQPGPGLRVRLQLLASGVREGGLSFGEAWLTYLTGAQRLAVGAVGVVALGLGLGGLVVMLMPHDDVLSGLTSPA
GLHKSLSAAEGAASAPN
>Mature_177_residues
MRRPKIPHYYGRLKVAPDAPPEVIRAAYKALVQKYHPDRHHGSVRHELVLTALNKAQDVLLDPDRRAAHDQWIRREEIRL
GYRDPEDQPGPGLRVRLQLLASGVREGGLSFGEAWLTYLTGAQRLAVGAVGVVALGLGLGGLVVMLMPHDDVLSGLTSPA
GLHKSLSAAEGAASAPN

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19165; Mature: 19165

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPKIPHYYGRLKVAPDAPPEVIRAAYKALVQKYHPDRHHGSVRHELVLTALNKAQDVL
CCCCCCCHHHCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LDPDRRAAHDQWIRREEIRLGYRDPEDQPGPGLRVRLQLLASGVREGGLSFGEAWLTYLT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GAQRLAVGAVGVVALGLGLGGLVVMLMPHDDVLSGLTSPAGLHKSLSAAEGAASAPN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRPKIPHYYGRLKVAPDAPPEVIRAAYKALVQKYHPDRHHGSVRHELVLTALNKAQDVL
CCCCCCCHHHCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LDPDRRAAHDQWIRREEIRLGYRDPEDQPGPGLRVRLQLLASGVREGGLSFGEAWLTYLT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GAQRLAVGAVGVVALGLGLGGLVVMLMPHDDVLSGLTSPAGLHKSLSAAEGAASAPN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA