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The map label for this gene is yqfA [C]

Identifier: 124265724

GI number: 124265724

Start: 567718

End: 568362

Strand: Direct

Name: yqfA [C]

Synonym: Mpe_A0531

Alternate gene names: 124265724

Gene position: 567718-568362 (Clockwise)

Preceding gene: 124265723

Following gene: 124265727

Centisome position: 14.04

GC content: 69.46

Gene sequence:

>645_bases
ATGGTCCTGCCCGAGCGCCCACAGACTGCCGCCGAGGAGTTGGCCAACGCGGTCAGTCATGGCCTCGGGCTGCTGCTGGC
GCTGGCGTCCTTGCCGGTGGTCGTGGAGTTCGCGGCGCGGCACGGCAGCCCGGTGAAGCTGGTCGGCGTCAGCGTGTTCT
CGGCGACGATGATCCTGGTGTACTTCGCGTCCGCGCTGTATCACGCGCTGCCGCCGGGGCGGGCCAAGCGATGGTGCAAC
ACGCTGGATCATGTGGCGATCTACCTCTTCATCGCAGGCAGCTACACACCGGTCGCGCTGGGCCGGCTGCCCGACGGGCC
GGGCTGGACGCTGCTGGGTCTGGTGTGGGCGCTGGCCGTCATCGGCGCCTTGCTCAAGATCACCCGGCGGCTGGCGAATC
CATTGCTGTCGACCGCGCTCTACGTGGCGATGGGCTGGCTCGCAGTGTTTGCCGCCGGCCCGGTGTTGCGCGACCTGCCG
CTGGGCATGCTGGCCTGGCTGCTGGCGGGCGGCCTGGCCTACCTGGTGGGCGTCGTGTTCTTCGTGCTCGACTCGCGTCT
GCGCTTCGGGCACTTCGTCTGGCACCTGTTCGTGCTGGCCGGCAGCACCTGCCACTTCTTTGCGGTGCTGGGGCCGGCCG
TCTGA

Upstream 100 bases:

>100_bases
CCCGTTTCGCGGGGGTGAGCCGCGCCGCTGCGCACGGCGCTTCGCACAATCAAGGCATCGCATCGCAGCACCGTGATGCA
GAGAAGCCGGAGCGTGCGCC

Downstream 100 bases:

>100_bases
GCGGCCGCGCAGCAGCCGTCAGGCCGGCTGCGGGCTGCGCTCCCGCAGCAGCACCTCGCCGCGCAGCGAGTGCGGGTAGG
CCTCGGTGATCGTCACGTCG

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVLPERPQTAAEELANAVSHGLGLLLALASLPVVVEFAARHGSPVKLVGVSVFSATMILVYFASALYHALPPGRAKRWCN
TLDHVAIYLFIAGSYTPVALGRLPDGPGWTLLGLVWALAVIGALLKITRRLANPLLSTALYVAMGWLAVFAAGPVLRDLP
LGMLAWLLAGGLAYLVGVVFFVLDSRLRFGHFVWHLFVLAGSTCHFFAVLGPAV

Sequences:

>Translated_214_residues
MVLPERPQTAAEELANAVSHGLGLLLALASLPVVVEFAARHGSPVKLVGVSVFSATMILVYFASALYHALPPGRAKRWCN
TLDHVAIYLFIAGSYTPVALGRLPDGPGWTLLGLVWALAVIGALLKITRRLANPLLSTALYVAMGWLAVFAAGPVLRDLP
LGMLAWLLAGGLAYLVGVVFFVLDSRLRFGHFVWHLFVLAGSTCHFFAVLGPAV
>Mature_214_residues
MVLPERPQTAAEELANAVSHGLGLLLALASLPVVVEFAARHGSPVKLVGVSVFSATMILVYFASALYHALPPGRAKRWCN
TLDHVAIYLFIAGSYTPVALGRLPDGPGWTLLGLVWALAVIGALLKITRRLANPLLSTALYVAMGWLAVFAAGPVLRDLP
LGMLAWLLAGGLAYLVGVVFFVLDSRLRFGHFVWHLFVLAGSTCHFFAVLGPAV

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=133, Percent_Identity=35.3383458646617, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1789266, Length=208, Percent_Identity=39.9038461538462, Blast_Score=148, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71996356, Length=217, Percent_Identity=33.1797235023041, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24640324, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22823; Mature: 22823

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPERPQTAAEELANAVSHGLGLLLALASLPVVVEFAARHGSPVKLVGVSVFSATMILV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YFASALYHALPPGRAKRWCNTLDHVAIYLFIAGSYTPVALGRLPDGPGWTLLGLVWALAV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHH
IGALLKITRRLANPLLSTALYVAMGWLAVFAAGPVLRDLPLGMLAWLLAGGLAYLVGVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLDSRLRFGHFVWHLFVLAGSTCHFFAVLGPAV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MVLPERPQTAAEELANAVSHGLGLLLALASLPVVVEFAARHGSPVKLVGVSVFSATMILV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YFASALYHALPPGRAKRWCNTLDHVAIYLFIAGSYTPVALGRLPDGPGWTLLGLVWALAV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHH
IGALLKITRRLANPLLSTALYVAMGWLAVFAAGPVLRDLPLGMLAWLLAGGLAYLVGVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLDSRLRFGHFVWHLFVLAGSTCHFFAVLGPAV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]