Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265711
Identifier: 124265711
GI number: 124265711
Start: 556935
End: 557555
Strand: Direct
Name: 124265711
Synonym: Mpe_A0518
Alternate gene names: NA
Gene position: 556935-557555 (Clockwise)
Preceding gene: 124265710
Following gene: 124265718
Centisome position: 13.77
GC content: 68.92
Gene sequence:
>621_bases ATGCAGGGCACCCGCCGGCTCGTCCTGTTCGCTGGCCTGGGCCTCGCCGCAGGCCTGTCGCCCGCGCCGGCCCGTGCCGG ATCGCAGATCGAGGAGCCTCTGGCCGATGCGGTGCGCACCGCGCTGTCCGCGGCGGTCTCTCGCGGGGCACCGCCGCGCC CGAGCTTCGCCAGCACCGAGGAACGGCTCGCCTACCTGCGTTGGCTTGGTGCGATGAGCCAGCGTTTGCAGAAGCGCAAG GCCGAACACCTCACGCGCGTCGAGTTCCTCGAAACCCTCTGGTATGAAAGCCGCCGCGCCGGACTCGATCCGGGGCTGGT GCTGGGGTTGGTGGAAGTCGAGAGTGGCTTTCGCAAGTACGCGGTGTCGGTGGCCGGCGCGCGCGGTTACATGCAGGTGA TGCCGTTCTGGATGCGAACCATCGGCGATGGCGACGTCGGCCGTCTGTTCCATCTGCAGACCAACTTGCGCTTCGGCTGC GTGATCCTGCGGCATTACCTCGACCGCGAGCGCGGTGACCTGTACCTCGCGCTGGGCCGCTACAACGGCAGTCGCGGCCG CCCCGAGTATCCGAACGCCGTGTTCGCCGCGCGCAAGCGGTGGGAATACAAGCCCGGCTGA
Upstream 100 bases:
>100_bases AGGAGGGGCAGGTCGAGTTGCAGGGCCGGCAGGAGGCCGAGGCCGGCAAGCTGGCAGTCGCCGAGGTGGTCGCGCAGTTG CGTGCGCGCTTGCGCGACTG
Downstream 100 bases:
>100_bases GCGGCTCCGAACCTCAGAGACCCGACCACGCCCTGGGCGTCGCGGCGTCGAGCCCCAGCAGGCCGAGCACTCGTTCCACC GTGTCGTCGACCAGCTCGTC
Product: putative signal peptide protein
Products: NA
Alternate protein names: Transglycosylase; Transglycosylase SLT Domain Protein; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Soluble Lytic Murein Transglycosylase- Related Protein; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MQGTRRLVLFAGLGLAAGLSPAPARAGSQIEEPLADAVRTALSAAVSRGAPPRPSFASTEERLAYLRWLGAMSQRLQKRK AEHLTRVEFLETLWYESRRAGLDPGLVLGLVEVESGFRKYAVSVAGARGYMQVMPFWMRTIGDGDVGRLFHLQTNLRFGC VILRHYLDRERGDLYLALGRYNGSRGRPEYPNAVFAARKRWEYKPG
Sequences:
>Translated_206_residues MQGTRRLVLFAGLGLAAGLSPAPARAGSQIEEPLADAVRTALSAAVSRGAPPRPSFASTEERLAYLRWLGAMSQRLQKRK AEHLTRVEFLETLWYESRRAGLDPGLVLGLVEVESGFRKYAVSVAGARGYMQVMPFWMRTIGDGDVGRLFHLQTNLRFGC VILRHYLDRERGDLYLALGRYNGSRGRPEYPNAVFAARKRWEYKPG >Mature_206_residues MQGTRRLVLFAGLGLAAGLSPAPARAGSQIEEPLADAVRTALSAAVSRGAPPRPSFASTEERLAYLRWLGAMSQRLQKRK AEHLTRVEFLETLWYESRRAGLDPGLVLGLVEVESGFRKYAVSVAGARGYMQVMPFWMRTIGDGDVGRLFHLQTNLRFGC VILRHYLDRERGDLYLALGRYNGSRGRPEYPNAVFAARKRWEYKPG
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23027; Mature: 23027
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGTRRLVLFAGLGLAAGLSPAPARAGSQIEEPLADAVRTALSAAVSRGAPPRPSFASTE CCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH ERLAYLRWLGAMSQRLQKRKAEHLTRVEFLETLWYESRRAGLDPGLVLGLVEVESGFRKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHH AVSVAGARGYMQVMPFWMRTIGDGDVGRLFHLQTNLRFGCVILRHYLDRERGDLYLALGR HHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEC YNGSRGRPEYPNAVFAARKRWEYKPG CCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MQGTRRLVLFAGLGLAAGLSPAPARAGSQIEEPLADAVRTALSAAVSRGAPPRPSFASTE CCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH ERLAYLRWLGAMSQRLQKRKAEHLTRVEFLETLWYESRRAGLDPGLVLGLVEVESGFRKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHH AVSVAGARGYMQVMPFWMRTIGDGDVGRLFHLQTNLRFGCVILRHYLDRERGDLYLALGR HHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEC YNGSRGRPEYPNAVFAARKRWEYKPG CCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA