Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265695
Identifier: 124265695
GI number: 124265695
Start: 542155
End: 543066
Strand: Direct
Name: 124265695
Synonym: Mpe_A0502
Alternate gene names: NA
Gene position: 542155-543066 (Clockwise)
Preceding gene: 124265694
Following gene: 124265696
Centisome position: 13.41
GC content: 68.86
Gene sequence:
>912_bases ATGAATCCCGAGTTTCTTTCCTTGATGCAGCAGGCCGAGCGCGTGCTCGCGCGGCTCGATGCCCTGCTGCCGGGGCCGGG CGCCCGGCCGGTGACGGCGCCGGACTGGTCGGCATCGATCGCCTTCCGCTACCGCCGGCGGGGTGCCTCGCTGCTGGGAG GCGGCTGGCTGGAGCCGGTCCGGCACGTGGCATCGATCCGGCTGGCCGACCTGAAGGAGGTCGAGCCCCAGAAGGAGCGC CTGGTGCGCAACAGCGAGCAATTCGTCAGCGGCCGGCCGGCCAACAACGTGCTGCTGACCGGCGCGCGTGGGACCGGCAA GTCCTCGCTGGTGAAGGCCTGCCTGAACGAGTTCGCGCCGCGCGGACTGCGCTTGATCGAGATCGACAAGGCCGATCTGG TGGATCTGCCCGACATCGTCGACTTGGTGGCCGAACGCGACGAGCGCTTCCTGGTGTTCTGCGACGACCTCAGCTTCGAC GAGGGCGAGCCGGGCTACAAGGCGCTGAAGTCCATCCTCGACGGCTCGGTGGCGCAGTCGAGCGACAACGTGCTGATCGT GGCGACGTCCAACCGCCGCCACCTGCTGCCCGAATACATGAAGGAGAACCTCAGCTACCAGCACACCGAGGATGGCGAGG TGCATCCCGGCGAGGTGGTGGAGGAGAAGATCTCGCTGTCCGAACGCTTCGGGTTGTGGATCAGCTTCTATCCGTTCAGT CAGGACGAGTACCTGGCGATCGTCGCGCAGTGGCTGAGCGCCTTCGGCGCCGACGCGGACCACATCGCCGCGGCGCGACC CGAGGCGCTGGTCTGGGCGCTGGAGCGGGGTTCGCGCTCGGGCCGGGTGGCCTGGCAGTTCGCGCGTGACTACGCGGGGC GCGGCCGTCAGCGCGACGAGGTGCCGGGGTGA
Upstream 100 bases:
>100_bases TGCCGAGCGAACACCTCGACGCGGCACTGCGGCAACTCGCCACCTGATCCGGCCCCGCCCCGGCGAGGGGCTTCGGCGCC CGCCCCTACACTCGGCGGCC
Downstream 100 bases:
>100_bases GCGAGCGCATGCCGGTCGATGTGGCGGTCGGGGTGCTGTTCGACGCGCAGGGGCGCTTCCTGATGACCTCGCGGCCGGAC GGCAAGGTGTATGCCGGCTA
Product: AAA ATPase family protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPVRHVASIRLADLKEVEPQKER LVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAPRGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFD EGEPGYKALKSILDGSVAQSSDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDEVPG
Sequences:
>Translated_303_residues MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPVRHVASIRLADLKEVEPQKER LVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAPRGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFD EGEPGYKALKSILDGSVAQSSDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDEVPG >Mature_303_residues MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPVRHVASIRLADLKEVEPQKER LVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAPRGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFD EGEPGYKALKSILDGSVAQSSDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDEVPG
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33714; Mature: 33714
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHH RHVASIRLADLKEVEPQKERLVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAP HHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC RGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFDEGEPGYKALKSILDGSVAQS CCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC SDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS CCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDE CCHHHHHHHHHHHHHCCCHHHHHHCCCHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC VPG CCC >Mature Secondary Structure MNPEFLSLMQQAERVLARLDALLPGPGARPVTAPDWSASIAFRYRRRGASLLGGGWLEPV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHH RHVASIRLADLKEVEPQKERLVRNSEQFVSGRPANNVLLTGARGTGKSSLVKACLNEFAP HHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC RGLRLIEIDKADLVDLPDIVDLVAERDERFLVFCDDLSFDEGEPGYKALKSILDGSVAQS CCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC SDNVLIVATSNRRHLLPEYMKENLSYQHTEDGEVHPGEVVEEKISLSERFGLWISFYPFS CCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC QDEYLAIVAQWLSAFGADADHIAAARPEALVWALERGSRSGRVAWQFARDYAGRGRQRDE CCHHHHHHHHHHHHHCCCHHHHHHCCCHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC VPG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA