Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is gltK [H]
Identifier: 124265638
GI number: 124265638
Start: 483876
End: 484544
Strand: Direct
Name: gltK [H]
Synonym: Mpe_A0445
Alternate gene names: 124265638
Gene position: 483876-484544 (Clockwise)
Preceding gene: 124265637
Following gene: 124265639
Centisome position: 11.96
GC content: 62.48
Gene sequence:
>669_bases ATGCTGAACCTCGATTTTTCCTTCCTGAACTGGGACGTCGTCTCCGGCTTCGTCCTCAAGGGCCTGGTCTTCTCGGTGCA GCTCACGCTGATCGCGATGGTCGGTGGCATCGTGCTGGGCACCCTGCTGGCGCTGATGCGGCTGTCGGGCAAGAAGTGGC TGGTGGTCCCGGCGGCGTTCTACGTCAACACGCTGCGTTCCATCCCGCTGGTGATGGTGATCCTGTGGTTCTTCCTGCTG ATCCCGTTGCTGATCGGGCGGCCGATGGGCGCCGAGCTGTCGGCCATCATCACCTTCACGGTGTTCGAGGCGGCCTACTA CTCCGAGATCATGCGCGCCGGTATCCAGAGCGTGCCCAAGGGCCAGGTCTATGCCGGCTACGCGGTCGGCATGACCTACT CGCAGAGCATGCAGCTGATCGTGCTGCCGCAGGCCTTCCGCAACATGCTGCCGGTGCTGATGACGCAGACCATCATCCTG TTCCAGGACACCTCGCTGGTCTACGCGATCGGCGCCTACGACCTGCTCAAGGGCTTCGAGGTCGCCGGCAAGAACTTCAA CCGTCCGGTCGAGACCTACCTGGTCGCCGCCGTCGTCTACTTCGTGATCTGCTTCAGCCTGAGCATGCTTGTGCGCCGGC TGCAGAAGAAGATCGCCATCATCCGCTGA
Upstream 100 bases:
>100_bases CGGCATGGCGGGAGGCAAATGATGAACCCCCACGTCCCTTTGCTCCTTCCCCCCAAGGGGGCTCGGCCTGCCCTTGGGGT GGCCCGGCGGGAGGCCTGAG
Downstream 100 bases:
>100_bases TCAGGAGAGCGCCGTGATCGACATCAAGAACATCAGCAAGTGGTACGGCAGCTTCCAGGTGCTGACCGACTGCACCACCA ACGTCAAGAAGGGCGAGGTG
Product: amino acid permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLNLDFSFLNWDVVSGFVLKGLVFSVQLTLIAMVGGIVLGTLLALMRLSGKKWLVVPAAFYVNTLRSIPLVMVILWFFLL IPLLIGRPMGAELSAIITFTVFEAAYYSEIMRAGIQSVPKGQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPVLMTQTIIL FQDTSLVYAIGAYDLLKGFEVAGKNFNRPVETYLVAAVVYFVICFSLSMLVRRLQKKIAIIR
Sequences:
>Translated_222_residues MLNLDFSFLNWDVVSGFVLKGLVFSVQLTLIAMVGGIVLGTLLALMRLSGKKWLVVPAAFYVNTLRSIPLVMVILWFFLL IPLLIGRPMGAELSAIITFTVFEAAYYSEIMRAGIQSVPKGQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPVLMTQTIIL FQDTSLVYAIGAYDLLKGFEVAGKNFNRPVETYLVAAVVYFVICFSLSMLVRRLQKKIAIIR >Mature_222_residues MLNLDFSFLNWDVVSGFVLKGLVFSVQLTLIAMVGGIVLGTLLALMRLSGKKWLVVPAAFYVNTLRSIPLVMVILWFFLL IPLLIGRPMGAELSAIITFTVFEAAYYSEIMRAGIQSVPKGQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPVLMTQTIIL FQDTSLVYAIGAYDLLKGFEVAGKNFNRPVETYLVAAVVYFVICFSLSMLVRRLQKKIAIIR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=49.047619047619, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=30.6930693069307, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=34.4497607655502, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=29.1479820627803, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1788645, Length=215, Percent_Identity=27.906976744186, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1786874, Length=172, Percent_Identity=27.3255813953488, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI48994930, Length=135, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1787087, Length=125, Percent_Identity=32, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1788646, Length=198, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24741; Mature: 24741
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLDFSFLNWDVVSGFVLKGLVFSVQLTLIAMVGGIVLGTLLALMRLSGKKWLVVPAAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH YVNTLRSIPLVMVILWFFLLIPLLIGRPMGAELSAIITFTVFEAAYYSEIMRAGIQSVPK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPVLMTQTIILFQDTSLVYAIGAYDLLKGFE CCEEEEHEECCCHHCCCEEEEEHHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHH VAGKNFNRPVETYLVAAVVYFVICFSLSMLVRRLQKKIAIIR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLNLDFSFLNWDVVSGFVLKGLVFSVQLTLIAMVGGIVLGTLLALMRLSGKKWLVVPAAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH YVNTLRSIPLVMVILWFFLLIPLLIGRPMGAELSAIITFTVFEAAYYSEIMRAGIQSVPK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPVLMTQTIILFQDTSLVYAIGAYDLLKGFE CCEEEEHEECCCHHCCCEEEEEHHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHH VAGKNFNRPVETYLVAAVVYFVICFSLSMLVRRLQKKIAIIR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]