Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is gltJ [H]
Identifier: 124265637
GI number: 124265637
Start: 483057
End: 483797
Strand: Direct
Name: gltJ [H]
Synonym: Mpe_A0444
Alternate gene names: 124265637
Gene position: 483057-483797 (Clockwise)
Preceding gene: 124265636
Following gene: 124265638
Centisome position: 11.94
GC content: 65.99
Gene sequence:
>741_bases GTGGCCACATGGGACTGGCAGGTGTTCTGCAAGAACACCCTCGATGGCGAGGTCATCCCCCGCTGCTTCGGCAGCGGCGG CGACATCACCTATCTCGACTGGATGATCTCGGCCTGGGGCTGGACGCTGTCGGTGGCCCTGCTGGCGCTGCTGGTCGCGC TGCTGGTCGGCTCGCTGGTCGGCATCCTGCGCACGCTGCCCGACAAGCGGCTGGTGTTCCTGGGCAATGCGTGGACCGAG ATCTTCCGCAACGTCCCGCTGCTGGTCCAGGTGTTCCTCTGGTACCACGTGATCCCGTCGCTCTTCACCAGCCTGCGCAG CGTGCCCAGCTTCGTGCTGGTGGTGTTTGCGCTGGGCTTCTTCACCTCGGCGCGCATTGCCGAGCAGGTCAAGGCGGGCA TCCAGAGCCTGCCGCGCGGCCAGAGCTACGCCGGCCTCGCGATGGGCCTCACGCTGGGCCAGACCTACCGCCATGTGCTG CTGCCGATGGCGTTCCGCATCGTCATTCCGCCGCTCACCAGCGAGTCGATGAACATCATCAAGAACTCGTCGGTCGCGTT CGCGGTGAGCATCGCCGAGCTGACGATGTTCGCGATGCAGGCGCAGGAGGAAACCTCGCGCGGGGTCGAGGTCTACCTGG CGGTGACGGCGCTGTACTTCATCTCGGCCTTCGCCATCAACCGCATCATGCTGGTCGTCGAGGAACGCCTGCGCGTGCCC GGCATGGCGGGAGGCAAATGA
Upstream 100 bases:
>100_bases GCCCCGGCTTGAGTCGGGCGCGCGATAAGGGTACAACCCAACCGCGCCGCTCCGTCGGGCGCAGAAAGCGCGCTCGCACA CCCCAGGAAAGGGAGGCCTC
Downstream 100 bases:
>100_bases TGAACCCCCACGTCCCTTTGCTCCTTCCCCCCAAGGGGGCTCGGCCTGCCCTTGGGGTGGCCCGGCGGGAGGCCTGAGAT GCTGAACCTCGATTTTTCCT
Product: putative ABC transporter protein glutamate/aspartate transmembrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MATWDWQVFCKNTLDGEVIPRCFGSGGDITYLDWMISAWGWTLSVALLALLVALLVGSLVGILRTLPDKRLVFLGNAWTE IFRNVPLLVQVFLWYHVIPSLFTSLRSVPSFVLVVFALGFFTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVL LPMAFRIVIPPLTSESMNIIKNSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFISAFAINRIMLVVEERLRVP GMAGGK
Sequences:
>Translated_246_residues MATWDWQVFCKNTLDGEVIPRCFGSGGDITYLDWMISAWGWTLSVALLALLVALLVGSLVGILRTLPDKRLVFLGNAWTE IFRNVPLLVQVFLWYHVIPSLFTSLRSVPSFVLVVFALGFFTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVL LPMAFRIVIPPLTSESMNIIKNSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFISAFAINRIMLVVEERLRVP GMAGGK >Mature_245_residues ATWDWQVFCKNTLDGEVIPRCFGSGGDITYLDWMISAWGWTLSVALLALLVALLVGSLVGILRTLPDKRLVFLGNAWTEI FRNVPLLVQVFLWYHVIPSLFTSLRSVPSFVLVVFALGFFTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLL PMAFRIVIPPLTSESMNIIKNSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFISAFAINRIMLVVEERLRVPG MAGGK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=254, Percent_Identity=41.7322834645669, Blast_Score=194, Evalue=5e-51, Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=31.4553990610329, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787030, Length=198, Percent_Identity=31.3131313131313, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=36.0902255639098, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786873, Length=201, Percent_Identity=26.3681592039801, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082239, Length=162, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787086, Length=221, Percent_Identity=25.7918552036199, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788645, Length=202, Percent_Identity=24.7524752475248, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27156; Mature: 27024
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATWDWQVFCKNTLDGEVIPRCFGSGGDITYLDWMISAWGWTLSVALLALLVALLVGSLV CCCCCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILRTLPDKRLVFLGNAWTEIFRNVPLLVQVFLWYHVIPSLFTSLRSVPSFVLVVFALGF HHHHHCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLLPMAFRIVIPPLTSESMNII HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KNSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFISAFAINRIMLVVEERLRVP HCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GMAGGK CCCCCC >Mature Secondary Structure ATWDWQVFCKNTLDGEVIPRCFGSGGDITYLDWMISAWGWTLSVALLALLVALLVGSLV CCCCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILRTLPDKRLVFLGNAWTEIFRNVPLLVQVFLWYHVIPSLFTSLRSVPSFVLVVFALGF HHHHHCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLLPMAFRIVIPPLTSESMNII HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KNSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFISAFAINRIMLVVEERLRVP HCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GMAGGK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]