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The map label for this gene is ccsB [H]

Identifier: 124265626

GI number: 124265626

Start: 471798

End: 473837

Strand: Direct

Name: ccsB [H]

Synonym: Mpe_A0433

Alternate gene names: 124265626

Gene position: 471798-473837 (Clockwise)

Preceding gene: 124265625

Following gene: 124265627

Centisome position: 11.67

GC content: 68.58

Gene sequence:

>2040_bases
ATGCGGTTCTCGATCACGCTGCTGACCGTGATCTGCATCGCCTCGGTCATCGGTACCGTGCTGCGGCAGCACGAGTCGAT
GAACAACTACGTGAACCAGTTCGGGCCGTTCTGGGCGCAGGTGTTCGACGCACTCGACCTCTATGCGGTCTACAGCGCCT
GGTGGTTCCTGCTGATCCTGGCCTTCCTGGTCGCGTCGACCAGCCTGTGCATCGCGCGCAACGCGCCGAAGATCCTGGTC
GATCTCAAGGCCTACAAGGAGCAGATCCGCGCGAGCAGCCTCAAGTCCTTCCATCACCGCGCCGAGGGCACACTCGCCGC
GCCACGCGCCGAGGTGCTGGACCGCGTGTCGGCGTTGCTGGTCGCTGGCGGCTGGAAGGCCAAGCTGCAGGAACGCGAGG
GCGGCGTGATGGTGGCGGCCCGAAAGGGCGCTGCCAACAAGCTCGGCTATCTGGCCGCGCACTCGGCGATCGTGCTGATC
TGCATCGGCGGCCTGTTCGACGGTGACCTGGTGGTGCGTGCGCAGATGGCGCTGTTCGACAAGTCCGCCTGGCCCGGGGC
CGGCCTGCTGCGCAACGTGCCGGCCGAGCATGTGCTCTCCGAGGGCAACCCGACCTACCGCGGCAACATCCTGGTCGGCG
AAGGCCAGCGTGGCGGCACCGCGGTGATCCAGCTGAAGGACGGCGTGGTGCTGCAGCCGCTGCCGTTCGACATCGAGCTG
AAGAAGTTCCTGGTCGACTTCTACCCGACCGGCATGCCCAAGCGATTCGCCAGCGACATCGTGCTGCACGACCGCGACAC
CGGCGCCACCCGCACCGCGACCGTGAAGGTCAACGAGCCGGTGCAGCACCGCGGCGTGATGATCTACCTGTCGAGCTTCG
AGGACGGCGGCTCCAAGCTCAAGCTCCGGGGCTGGCCGCTGGGCGGCGGGACGCCGTTCCAGATGGACGGCGAGGTCGGC
ACCGAGACCAAGATCCAGAGCGAGCGCGACGGCCAGACGCTCGGCCTCGAGTTCACCGGCCTGCGCGTCATCAACGTCGA
GAACCTCACGGCCGTCGATGCGAGCGGCGGCACCGACGTGCGCAAGGTCGATCTCGTCAACCGGCTCGAGAGCCACCTCG
GTTCCGGCGCGAAGACGCGAACCGAGAAGACGCTGCAGAACGTCGGGCCGTCGATCAGCTACAAGCTGCGCGACGCGGCC
GGCCAGGCCCGCGAGTACAACAACTACACGCTGCCGCTCACGCTCGATGGCCAGCGCGTCTTCCTCGCTGGGGTGCGTGA
GACGCCCAACGAGCCATTCCGCTACCTGCGCATTCCGGCCGACGATGCCGACGGCCTGGCCGGCTGGATGCGGCTGCGCG
GCGGCCTCAACGAGCGGGCGTTGCGCGAGGCCGCGGTGCAGCGCTACGTGGCCCGCGCCACGCCGGCCGACAAGCCCGAA
CTGGCGGAGCAACTGACAGTATCGGCGCGGCGCGCGCTGGACCTCTACGCCGGCATCGAGCCGGTGCGCGCGGGCGAACC
GGCCGTCGGCGGGCTGCAGGCGCTGTCGGGCTTCCTGGAGGCCAGCGTGCCGGAAGCCGACCGCGAGCGCACCTCGGACG
TGCTGCTGCGCATCCTCAACGGCACGCTGTTCGAGTTGCTGAACCTGACGCGCGAGCGCGCCGGCCTCAAGCCCCTCGTG
CCCGACGAGGCCACCCAGGCCTTCATGACACAGGCCGTGCTGTCGCTCTCGGATGCCTTCTTCTACCCGGCGCCGGTGTT
GCTGGCGCTGGACGACTACACCCAGGTGCAGGCCAGCGTGTTCCAGGTCACGCGCACGCCGGGCAAGACGCTGGTCTACC
TCGGCTGCCTGTTCCTGATCATCGGCGTGTTCGCGATGCTCTATGTGCGCGAACGCCGCCTGTGGGTGTGGCTCGAGGAC
GCATCGGACGGCGGCGGCACGCGCCTGACCGCCGCGCTGTCGTCGACCCGGCAGACGCTCGACACCGACCGTGAGTTCGA
GCAGATACGCGACAGCCTCCTAGCGAAGGAAAGCGCATGA

Upstream 100 bases:

>100_bases
TTCGTCGAATCGTCCCTTTCCCATGACCGTCAGTACCACCGGCCTCGAACTGCCGACTCGCTCGCGCACGTTGCGCGCAG
CGGTCGAGGTGCTGTCGTCG

Downstream 100 bases:

>100_bases
ACACCACCACGCCCCCCGCCATGCTGACGATCGGTCGCGGCGGCTACTTCGCCCGGCGCAGCGCCTTCGACTGGATCTTC
GCGCTGCTGGTCGTGGCCGG

Product: putative cytochrome c-type biogenesis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 679

Protein sequence:

>679_residues
MRFSITLLTVICIASVIGTVLRQHESMNNYVNQFGPFWAQVFDALDLYAVYSAWWFLLILAFLVASTSLCIARNAPKILV
DLKAYKEQIRASSLKSFHHRAEGTLAAPRAEVLDRVSALLVAGGWKAKLQEREGGVMVAARKGAANKLGYLAAHSAIVLI
CIGGLFDGDLVVRAQMALFDKSAWPGAGLLRNVPAEHVLSEGNPTYRGNILVGEGQRGGTAVIQLKDGVVLQPLPFDIEL
KKFLVDFYPTGMPKRFASDIVLHDRDTGATRTATVKVNEPVQHRGVMIYLSSFEDGGSKLKLRGWPLGGGTPFQMDGEVG
TETKIQSERDGQTLGLEFTGLRVINVENLTAVDASGGTDVRKVDLVNRLESHLGSGAKTRTEKTLQNVGPSISYKLRDAA
GQAREYNNYTLPLTLDGQRVFLAGVRETPNEPFRYLRIPADDADGLAGWMRLRGGLNERALREAAVQRYVARATPADKPE
LAEQLTVSARRALDLYAGIEPVRAGEPAVGGLQALSGFLEASVPEADRERTSDVLLRILNGTLFELLNLTRERAGLKPLV
PDEATQAFMTQAVLSLSDAFFYPAPVLLALDDYTQVQASVFQVTRTPGKTLVYLGCLFLIIGVFAMLYVRERRLWVWLED
ASDGGGTRLTAALSSTRQTLDTDREFEQIRDSLLAKESA

Sequences:

>Translated_679_residues
MRFSITLLTVICIASVIGTVLRQHESMNNYVNQFGPFWAQVFDALDLYAVYSAWWFLLILAFLVASTSLCIARNAPKILV
DLKAYKEQIRASSLKSFHHRAEGTLAAPRAEVLDRVSALLVAGGWKAKLQEREGGVMVAARKGAANKLGYLAAHSAIVLI
CIGGLFDGDLVVRAQMALFDKSAWPGAGLLRNVPAEHVLSEGNPTYRGNILVGEGQRGGTAVIQLKDGVVLQPLPFDIEL
KKFLVDFYPTGMPKRFASDIVLHDRDTGATRTATVKVNEPVQHRGVMIYLSSFEDGGSKLKLRGWPLGGGTPFQMDGEVG
TETKIQSERDGQTLGLEFTGLRVINVENLTAVDASGGTDVRKVDLVNRLESHLGSGAKTRTEKTLQNVGPSISYKLRDAA
GQAREYNNYTLPLTLDGQRVFLAGVRETPNEPFRYLRIPADDADGLAGWMRLRGGLNERALREAAVQRYVARATPADKPE
LAEQLTVSARRALDLYAGIEPVRAGEPAVGGLQALSGFLEASVPEADRERTSDVLLRILNGTLFELLNLTRERAGLKPLV
PDEATQAFMTQAVLSLSDAFFYPAPVLLALDDYTQVQASVFQVTRTPGKTLVYLGCLFLIIGVFAMLYVRERRLWVWLED
ASDGGGTRLTAALSSTRQTLDTDREFEQIRDSLLAKESA
>Mature_679_residues
MRFSITLLTVICIASVIGTVLRQHESMNNYVNQFGPFWAQVFDALDLYAVYSAWWFLLILAFLVASTSLCIARNAPKILV
DLKAYKEQIRASSLKSFHHRAEGTLAAPRAEVLDRVSALLVAGGWKAKLQEREGGVMVAARKGAANKLGYLAAHSAIVLI
CIGGLFDGDLVVRAQMALFDKSAWPGAGLLRNVPAEHVLSEGNPTYRGNILVGEGQRGGTAVIQLKDGVVLQPLPFDIEL
KKFLVDFYPTGMPKRFASDIVLHDRDTGATRTATVKVNEPVQHRGVMIYLSSFEDGGSKLKLRGWPLGGGTPFQMDGEVG
TETKIQSERDGQTLGLEFTGLRVINVENLTAVDASGGTDVRKVDLVNRLESHLGSGAKTRTEKTLQNVGPSISYKLRDAA
GQAREYNNYTLPLTLDGQRVFLAGVRETPNEPFRYLRIPADDADGLAGWMRLRGGLNERALREAAVQRYVARATPADKPE
LAEQLTVSARRALDLYAGIEPVRAGEPAVGGLQALSGFLEASVPEADRERTSDVLLRILNGTLFELLNLTRERAGLKPLV
PDEATQAFMTQAVLSLSDAFFYPAPVLLALDDYTQVQASVFQVTRTPGKTLVYLGCLFLIIGVFAMLYVRERRLWVWLED
ASDGGGTRLTAALSSTRQTLDTDREFEQIRDSLLAKESA

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 74267; Mature: 74267

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSITLLTVICIASVIGTVLRQHESMNNYVNQFGPFWAQVFDALDLYAVYSAWWFLLIL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AFLVASTSLCIARNAPKILVDLKAYKEQIRASSLKSFHHRAEGTLAAPRAEVLDRVSALL
HHHHHCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VAGGWKAKLQEREGGVMVAARKGAANKLGYLAAHSAIVLICIGGLFDGDLVVRAQMALFD
HCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHC
KSAWPGAGLLRNVPAEHVLSEGNPTYRGNILVGEGQRGGTAVIQLKDGVVLQPLPFDIEL
CCCCCCCCHHHCCCHHHHHCCCCCCEECCEEEECCCCCCEEEEEEECCEEECCCCCCHHH
KKFLVDFYPTGMPKRFASDIVLHDRDTGATRTATVKVNEPVQHRGVMIYLSSFEDGGSKL
HHHHHHHCCCCCCHHHHCCEEEECCCCCCCEEEEEEECCCHHHCCEEEEEECCCCCCCEE
KLRGWPLGGGTPFQMDGEVGTETKIQSERDGQTLGLEFTGLRVINVENLTAVDASGGTDV
EEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCEEEEECCCCCCH
RKVDLVNRLESHLGSGAKTRTEKTLQNVGPSISYKLRDAAGQAREYNNYTLPLTLDGQRV
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHCCCHHCCCCEEEEEEECCCEE
FLAGVRETPNEPFRYLRIPADDADGLAGWMRLRGGLNERALREAAVQRYVARATPADKPE
EEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH
LAEQLTVSARRALDLYAGIEPVRAGEPAVGGLQALSGFLEASVPEADRERTSDVLLRILN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GTLFELLNLTRERAGLKPLVPDEATQAFMTQAVLSLSDAFFYPAPVLLALDDYTQVQASV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
FQVTRTPGKTLVYLGCLFLIIGVFAMLYVRERRLWVWLEDASDGGGTRLTAALSSTRQTL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHHHHH
DTDREFEQIRDSLLAKESA
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFSITLLTVICIASVIGTVLRQHESMNNYVNQFGPFWAQVFDALDLYAVYSAWWFLLIL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AFLVASTSLCIARNAPKILVDLKAYKEQIRASSLKSFHHRAEGTLAAPRAEVLDRVSALL
HHHHHCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VAGGWKAKLQEREGGVMVAARKGAANKLGYLAAHSAIVLICIGGLFDGDLVVRAQMALFD
HCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHC
KSAWPGAGLLRNVPAEHVLSEGNPTYRGNILVGEGQRGGTAVIQLKDGVVLQPLPFDIEL
CCCCCCCCHHHCCCHHHHHCCCCCCEECCEEEECCCCCCEEEEEEECCEEECCCCCCHHH
KKFLVDFYPTGMPKRFASDIVLHDRDTGATRTATVKVNEPVQHRGVMIYLSSFEDGGSKL
HHHHHHHCCCCCCHHHHCCEEEECCCCCCCEEEEEEECCCHHHCCEEEEEECCCCCCCEE
KLRGWPLGGGTPFQMDGEVGTETKIQSERDGQTLGLEFTGLRVINVENLTAVDASGGTDV
EEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCEEEEECCCCCCH
RKVDLVNRLESHLGSGAKTRTEKTLQNVGPSISYKLRDAAGQAREYNNYTLPLTLDGQRV
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHCCCHHCCCCEEEEEEECCCEE
FLAGVRETPNEPFRYLRIPADDADGLAGWMRLRGGLNERALREAAVQRYVARATPADKPE
EEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH
LAEQLTVSARRALDLYAGIEPVRAGEPAVGGLQALSGFLEASVPEADRERTSDVLLRILN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GTLFELLNLTRERAGLKPLVPDEATQAFMTQAVLSLSDAFFYPAPVLLALDDYTQVQASV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
FQVTRTPGKTLVYLGCLFLIIGVFAMLYVRERRLWVWLEDASDGGGTRLTAALSSTRQTL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHHHHH
DTDREFEQIRDSLLAKESA
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA