Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is groEL [H]
Identifier: 124265621
GI number: 124265621
Start: 463817
End: 465463
Strand: Direct
Name: groEL [H]
Synonym: Mpe_A0428
Alternate gene names: 124265621
Gene position: 463817-465463 (Clockwise)
Preceding gene: 124265620
Following gene: 124265622
Centisome position: 11.47
GC content: 65.82
Gene sequence:
>1647_bases ATGGCAGCTAAAGACGTCGTTTTCGGAGGTGAAGCCCGCGCGCGCATGGTCGAAGGCGTGAACATCCTGGCCAACGCGGT CAAGGTGACGCTGGGCCCGAAGGGCCGCAACGTGGTGCTCGAGCGTTCGTTCGGCGCCCCGACCGTGACCAAGGACGGTG TGTCCGTGGCCAAGGAAATCGAGCTGAAGGACAAGCTCCAGAACATGGGCGCCCAGATGGTCAAGGAAGTCGCTTCCAAG ACCTCGGACAACGCCGGTGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCGATCGTGCGCGAAGGCATGAAGTACGT GGCCGCGGGCATGAACCCGATGGACCTGAAGCGCGGCATCGACAAGGCCGTCGTGAGCTTGGTCGAGCAGCTGAAGAAGC AGTCGAAGCCGACCACCACCAGCAAGGAAATCGCCCAGGTCGGCACCATCTCGGCGAATTCGGACGACGACGTCGGCCAG ATCATCGCGTCGGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGCAAGAGCCTGAACAACGAGCT CGACGTGGTCGAAGGCATGCAGTTCGACCGCGGCTACCTGTCGCCCTACTTCATCAACAACCCGGAAAAGCAGAGCGCGG TGCTCGACAACCCGTTCGTGCTGCTCTACGACAAGAAGATCAGCAACATCCGTGACCTGCTGCCGACGCTGGAGCAGGTG GCCAAGTCGGGCCGTCCGCTGCTGATCATCGCCGAGGAAGTCGAAGGCGAAGCGCTCGCGACGCTGGTGGTCAACACCAT CCGCGGCATCCTGAAGGTCGTGGCCGTCAAGGCGCCGGGCTTCGGTGACCGTCGCAAGGCGATGCTCGAGGACATCGCGA TCCTGACCGGCGGCAAGGTCATCGCCGAGGAAGTCGGCCTGACGCTCGAGAAGGTCACGCTGGCCGACCTGGGCCAGGCC AAGCGCGTCGAGGTGGGCAAGGAAAACACCACGATCATCGACGGCGCCGGCGCCGCGGGCGACATCGAAGCCCGCGTCAA GCAGGTGCGCGTGCAGATCGAGGAAGCCACCAGCGACTACGACCGCGAGAAGCTCCAGGAGCGCGTGGCCAAGCTCGCCG GCGGCGTGGCCGTCATCAAGGTCGGTGCCGCCACCGAAGTCGAGATGAAGGAAAAGAAGGCCCGTGTCGAAGACGCCCTG CACGCCACGCGTGCCGCGGTGGAAGAAGGCATCGTGGCCGGCGGTGGCGTGGCGCTGCTGCGCGCCAAGCAGGCCGCCGG TGCGATCAAGGGCGACAACGCCGACCAGGACGCCGGCATCAAGCTGATCCTGCGTGCGATCGAGGAGCCGCTGCGCATCA TCGTCACCAACGCCGGTGACGAAGCCAGCGTGGTGGTGAACGCCGTGCTCGCCGGCAAGGGCAACTACGGCTACAACGCC GCCAACGGCACCTACGGCGACATGATCGAGATGGGCATCCTGGACCCGACCAAGGTGACCCGCACCGCGCTGCAGAACGC CGCCTCGGTGGCCGCGCTGATGCTGACGACGGAAGCCATGGTCGCCGAGTCGCCCAAGGACGACGCGCCGGCCGGCGGCA TGCCGGGTGGCATGGGCGGCATGGGTGGCATGGGCATGGACATGTGA
Upstream 100 bases:
>100_bases GCAGGCTGACTTCGCGCAGCGAAGTCAAGGCCCCAAGGGTCGGCCGTAGACAGAAGAATTCCCCGGCGCGAGCCGGCAAA TCAGATTTCGGAGAATACAA
Downstream 100 bases:
>100_bases TGTCCCGCCGGCCTCCCACGGGAGGCCGGCCGCCTGGGCTCTGCCCAGAACCGCGTCAGCAAGGGCCGCAGAAATGCGGC CCTTTTTCATGCGCGTTCGG
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein 1; Protein Cpn60 1 [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQ IIASAMDKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNPEKQSAVLDNPFVLLYDKKISNIRDLLPTLEQV AKSGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQA KRVEVGKENTTIIDGAGAAGDIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVAGGGVALLRAKQAAGAIKGDNADQDAGIKLILRAIEEPLRIIVTNAGDEASVVVNAVLAGKGNYGYNA ANGTYGDMIEMGILDPTKVTRTALQNAASVAALMLTTEAMVAESPKDDAPAGGMPGGMGGMGGMGMDM
Sequences:
>Translated_548_residues MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQ IIASAMDKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNPEKQSAVLDNPFVLLYDKKISNIRDLLPTLEQV AKSGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQA KRVEVGKENTTIIDGAGAAGDIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVAGGGVALLRAKQAAGAIKGDNADQDAGIKLILRAIEEPLRIIVTNAGDEASVVVNAVLAGKGNYGYNA ANGTYGDMIEMGILDPTKVTRTALQNAASVAALMLTTEAMVAESPKDDAPAGGMPGGMGGMGGMGMDM >Mature_547_residues AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKT SDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQI IASAMDKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNPEKQSAVLDNPFVLLYDKKISNIRDLLPTLEQVA KSGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQAK RVEVGKENTTIIDGAGAAGDIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH ATRAAVEEGIVAGGGVALLRAKQAAGAIKGDNADQDAGIKLILRAIEEPLRIIVTNAGDEASVVVNAVLAGKGNYGYNAA NGTYGDMIEMGILDPTKVTRTALQNAASVAALMLTTEAMVAESPKDDAPAGGMPGGMGGMGGMGMDM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=527, Percent_Identity=53.5104364326376, Blast_Score=550, Evalue=1e-156, Organism=Homo sapiens, GI31542947, Length=527, Percent_Identity=53.5104364326376, Blast_Score=550, Evalue=1e-156, Organism=Homo sapiens, GI63162572, Length=544, Percent_Identity=21.6911764705882, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1790586, Length=529, Percent_Identity=75.4253308128544, Blast_Score=788, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=530, Percent_Identity=53.3962264150943, Blast_Score=544, Evalue=1e-155, Organism=Caenorhabditis elegans, GI193210679, Length=222, Percent_Identity=50.9009009009009, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17564182, Length=568, Percent_Identity=22.0070422535211, Blast_Score=69, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=53.041825095057, Blast_Score=546, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6322524, Length=366, Percent_Identity=23.4972677595628, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24641193, Length=527, Percent_Identity=52.7514231499051, Blast_Score=554, Evalue=1e-158, Organism=Drosophila melanogaster, GI24641191, Length=527, Percent_Identity=52.7514231499051, Blast_Score=554, Evalue=1e-158, Organism=Drosophila melanogaster, GI45550936, Length=524, Percent_Identity=51.7175572519084, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI45550132, Length=524, Percent_Identity=51.7175572519084, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI45550935, Length=524, Percent_Identity=51.7175572519084, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI17864606, Length=551, Percent_Identity=43.9201451905626, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI24584129, Length=526, Percent_Identity=36.5019011406844, Blast_Score=335, Evalue=7e-92, Organism=Drosophila melanogaster, GI19921262, Length=526, Percent_Identity=36.5019011406844, Blast_Score=335, Evalue=7e-92,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 57392; Mature: 57261
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI CCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQIIASAMDKVGKEGVITVEDG HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC KSLNNELDVVEGMQFDRGYLSPYFINNPEKQSAVLDNPFVLLYDKKISNIRDLLPTLEQV CCCCCCHHHHHCCCCCCCCCCCEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH AKSGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHH IAEEVGLTLEKVTLADLGQAKRVEVGKENTTIIDGAGAAGDIEARVKQVRVQIEEATSDY HHHHHCCCHHEEHHHHCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RAKQAAGAIKGDNADQDAGIKLILRAIEEPLRIIVTNAGDEASVVVNAVLAGKGNYGYNA HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHEEEHEECCCCCCCCC ANGTYGDMIEMGILDPTKVTRTALQNAASVAALMLTTEAMVAESPKDDAPAGGMPGGMGG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MGGMGMDM CCCCCCCC >Mature Secondary Structure AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI CCCCEEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQIIASAMDKVGKEGVITVEDG HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC KSLNNELDVVEGMQFDRGYLSPYFINNPEKQSAVLDNPFVLLYDKKISNIRDLLPTLEQV CCCCCCHHHHHCCCCCCCCCCCEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH AKSGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHH IAEEVGLTLEKVTLADLGQAKRVEVGKENTTIIDGAGAAGDIEARVKQVRVQIEEATSDY HHHHHCCCHHEEHHHHCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RAKQAAGAIKGDNADQDAGIKLILRAIEEPLRIIVTNAGDEASVVVNAVLAGKGNYGYNA HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHEEEHEECCCCCCCCC ANGTYGDMIEMGILDPTKVTRTALQNAASVAALMLTTEAMVAESPKDDAPAGGMPGGMGG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MGGMGMDM CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA