Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265622

Identifier: 124265622

GI number: 124265622

Start: 465590

End: 467773

Strand: Direct

Name: 124265622

Synonym: Mpe_A0429

Alternate gene names: NA

Gene position: 465590-467773 (Clockwise)

Preceding gene: 124265621

Following gene: 124265623

Centisome position: 11.51

GC content: 73.9

Gene sequence:

>2184_bases
ATGGATGTCTCGCCGCTGCTGCAGCGCTACCTCGACAGCTGTCTCGCGGAGGTGCCGCGCTGGATGAGCCGGGTCGCGAA
CGAGGCCCTGCAGGCGCTGCACGCACCGACCACCCGCAGCGCGCTGCGCGAACTGCCGGCGCGCCCGCGCGACGACGCCG
AGCTGGCCCTGCGTCACAACCATCCGCTGTGGGCGCGTCGCGTCGGTGAGTTGCTGGGTTCGCGCTGGCGCAGCGAGATC
GAGGCCGGCGCGCCCGACGCGGGCGCGACGCTGTCGCCGCGTCCGGCCTGGTCGGCCGAAGCGCTGACGCTGGTCGACGA
AGCCGAGGCCGAAGAGAACATCGAGCTGCTGCGCGCGGTGCAGCTGGTCGACCACGCCGCCGAGCACGAGCTGCACGAGC
TGCAGTCGCGCACAGCGACGCTGCGCGGCCAGGACGCGGTGCGCGCGACCTCCAACCTGCTGCGGCCCGAGCTGCTGGTG
CGGGCGGTGTGGGACGCCAGCGAGGTGCTGGGCCTCGGCGCACCGGCCCGCAAGGCACTGATGCGCGCCAGCGGCGAGCC
GCTGGCACAGGCGCTGAAGCAGGTCGCGATCGACGCCGGCCGGCGCCTGGCCGACTGGGGGGTCGGCCAGGCGGCCTGGA
AGGCCAGCTCCACGCCGGCGGCACGGCGGGTCGCGCCGCCGAATTCCGGCTACGACCTGACGCGTCCCGGCGCACTCGAC
AGCCTGCGCAGCCGCCTCAGCACGCGCTACGCGAACATCGACGGTGCCACGCGCGCCGGTCCGATGGACGAGGCCGATTC
GCTGCAGCAGCTCGACCGCAATCTGGTGCATGTGCTGGCGCGGCGACCGCTGGGGATCCAGGGCGCCGACCGCCTGATGG
CCCGGCTGCCCTTCCTCGAGGCGGCCGGCCGCCACGACGACGACCGCGAGATCATGCTGCTGGTGGCCCACCTGAGCGGC
GCCGTGCTCGACGACGCGCTGCTGCCGCTGCCGGTGCGTTCCACGCTGGCCAGCTTGCAGGCACCGTTGCTGCGCGTGGC
GCTGCGCGAGCCCCGGGTGCTGGAGGATCACTCGCACCCGATCTGGCAGATGATGATTCGGCTCGCGTCGCACACGGCCG
GCTTCCAGGACGACGATGATCCCCGGCTGTGCGCGTTGCTGCTCGACGTCGAGGTGCTGTTCACGCGCCTGCAGGCGGCC
ACGCCGGCGATCGCGGTGCACGCGCAGGCGCTGACCGCGCTCGATTCGCTGCTGGTCGGCGAGCTCGACGCCGAGCGGCG
TGAGGCCGCTGCGCCGATCGCCAAGCTGCAGGCGGCCGCGCGGCGCGTCACGATGGTCGAGGCGCTGCGCCGGCAGGTGC
GACTCGAACTGCAGGACGCGACCTCGCCGTGGCGCATCGAGGGCAGTACGCCGGCCCGCCCGGCCGCGGCGGTGGTGCTG
GACGAGACGCTGCAGCACTTCCTCACCGGGCCGTGGCCCGAGGTGCTGGCGCATGCCCTGATCAACGACGGCGAGCAGGC
CGACACGACGCGCGGTCTGCTGGCCGTGGTGCCGGATCTGCTCGCCAGCCTTGCGCCGCTGCGCAGCGAGGACGACCGTC
GCCGCCTGGTGGCCGCGGTGCCGGGCCTGGTGCAGCGACTGCAGCAGGGCATGGCGCGCATCGCCACACCTCCCTCGCAA
CGCGATGCCGTGCTGGCCACCCTGATGGCATGCCACACCGACCTGTTGCGGCCGATCGGGAGTGCGGCGGTGTCCCTCAC
GCCAGAGGAAATCGTGCGCCGGATGCGCGAGGAAGAACTGCCGGACGAGCCAGCGCCGCGCACGCCGGCCGGCGACTCGA
TGTTCGACATCGCGACGCTCGACACCGTGCCGGCGGCGCTGATGCCCGAGGCGCCGGTGGCGGGCGCGCGCGGCTGGCTG
CAGCACCTGGCGGTCGGTACCTGGTGCCGGTTGGTCGCCCGCGGCGACTGGACCGTGGCGCGCGTGTTGTGGGTCGACGA
GTCGCGCGAGCACTGGCTGTTCAGCGACGCCGAACTCGGACTCACGCACGGCCTCACGCGGCGTGCGCTCGAGCGCCTGG
CCGACGGCGGCCTGGCCGGGCCACTGGAGCAGCGCAACCTCATCGAGCGCGCCGTCGACGCCCTGATGGCGCCGCCGCGC
GGCCGCGACACCACGTTGGGCTGA

Upstream 100 bases:

>100_bases
CGGCCGCCTGGGCTCTGCCCAGAACCGCGTCAGCAAGGGCCGCAGAAATGCGGCCCTTTTTCATGCGCGTTCGGCGAACG
CTCCCGGGATAATCGGGCGC

Downstream 100 bases:

>100_bases
GGCGCGGCGTCATCGCGCCACCGTCGCGGGGATCGTGCGAGAGCCCCGCACAATCCCGGCATGTACCGCATCCGCGTCCT
GTCGTCGCTCCGGGGAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MDVSPLLQRYLDSCLAEVPRWMSRVANEALQALHAPTTRSALRELPARPRDDAELALRHNHPLWARRVGELLGSRWRSEI
EAGAPDAGATLSPRPAWSAEALTLVDEAEAEENIELLRAVQLVDHAAEHELHELQSRTATLRGQDAVRATSNLLRPELLV
RAVWDASEVLGLGAPARKALMRASGEPLAQALKQVAIDAGRRLADWGVGQAAWKASSTPAARRVAPPNSGYDLTRPGALD
SLRSRLSTRYANIDGATRAGPMDEADSLQQLDRNLVHVLARRPLGIQGADRLMARLPFLEAAGRHDDDREIMLLVAHLSG
AVLDDALLPLPVRSTLASLQAPLLRVALREPRVLEDHSHPIWQMMIRLASHTAGFQDDDDPRLCALLLDVEVLFTRLQAA
TPAIAVHAQALTALDSLLVGELDAERREAAAPIAKLQAAARRVTMVEALRRQVRLELQDATSPWRIEGSTPARPAAAVVL
DETLQHFLTGPWPEVLAHALINDGEQADTTRGLLAVVPDLLASLAPLRSEDDRRRLVAAVPGLVQRLQQGMARIATPPSQ
RDAVLATLMACHTDLLRPIGSAAVSLTPEEIVRRMREEELPDEPAPRTPAGDSMFDIATLDTVPAALMPEAPVAGARGWL
QHLAVGTWCRLVARGDWTVARVLWVDESREHWLFSDAELGLTHGLTRRALERLADGGLAGPLEQRNLIERAVDALMAPPR
GRDTTLG

Sequences:

>Translated_727_residues
MDVSPLLQRYLDSCLAEVPRWMSRVANEALQALHAPTTRSALRELPARPRDDAELALRHNHPLWARRVGELLGSRWRSEI
EAGAPDAGATLSPRPAWSAEALTLVDEAEAEENIELLRAVQLVDHAAEHELHELQSRTATLRGQDAVRATSNLLRPELLV
RAVWDASEVLGLGAPARKALMRASGEPLAQALKQVAIDAGRRLADWGVGQAAWKASSTPAARRVAPPNSGYDLTRPGALD
SLRSRLSTRYANIDGATRAGPMDEADSLQQLDRNLVHVLARRPLGIQGADRLMARLPFLEAAGRHDDDREIMLLVAHLSG
AVLDDALLPLPVRSTLASLQAPLLRVALREPRVLEDHSHPIWQMMIRLASHTAGFQDDDDPRLCALLLDVEVLFTRLQAA
TPAIAVHAQALTALDSLLVGELDAERREAAAPIAKLQAAARRVTMVEALRRQVRLELQDATSPWRIEGSTPARPAAAVVL
DETLQHFLTGPWPEVLAHALINDGEQADTTRGLLAVVPDLLASLAPLRSEDDRRRLVAAVPGLVQRLQQGMARIATPPSQ
RDAVLATLMACHTDLLRPIGSAAVSLTPEEIVRRMREEELPDEPAPRTPAGDSMFDIATLDTVPAALMPEAPVAGARGWL
QHLAVGTWCRLVARGDWTVARVLWVDESREHWLFSDAELGLTHGLTRRALERLADGGLAGPLEQRNLIERAVDALMAPPR
GRDTTLG
>Mature_727_residues
MDVSPLLQRYLDSCLAEVPRWMSRVANEALQALHAPTTRSALRELPARPRDDAELALRHNHPLWARRVGELLGSRWRSEI
EAGAPDAGATLSPRPAWSAEALTLVDEAEAEENIELLRAVQLVDHAAEHELHELQSRTATLRGQDAVRATSNLLRPELLV
RAVWDASEVLGLGAPARKALMRASGEPLAQALKQVAIDAGRRLADWGVGQAAWKASSTPAARRVAPPNSGYDLTRPGALD
SLRSRLSTRYANIDGATRAGPMDEADSLQQLDRNLVHVLARRPLGIQGADRLMARLPFLEAAGRHDDDREIMLLVAHLSG
AVLDDALLPLPVRSTLASLQAPLLRVALREPRVLEDHSHPIWQMMIRLASHTAGFQDDDDPRLCALLLDVEVLFTRLQAA
TPAIAVHAQALTALDSLLVGELDAERREAAAPIAKLQAAARRVTMVEALRRQVRLELQDATSPWRIEGSTPARPAAAVVL
DETLQHFLTGPWPEVLAHALINDGEQADTTRGLLAVVPDLLASLAPLRSEDDRRRLVAAVPGLVQRLQQGMARIATPPSQ
RDAVLATLMACHTDLLRPIGSAAVSLTPEEIVRRMREEELPDEPAPRTPAGDSMFDIATLDTVPAALMPEAPVAGARGWL
QHLAVGTWCRLVARGDWTVARVLWVDESREHWLFSDAELGLTHGLTRRALERLADGGLAGPLEQRNLIERAVDALMAPPR
GRDTTLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79237; Mature: 79237

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSPLLQRYLDSCLAEVPRWMSRVANEALQALHAPTTRSALRELPARPRDDAELALRHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCC
HPLWARRVGELLGSRWRSEIEAGAPDAGATLSPRPAWSAEALTLVDEAEAEENIELLRAV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QLVDHAAEHELHELQSRTATLRGQDAVRATSNLLRPELLVRAVWDASEVLGLGAPARKAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MRASGEPLAQALKQVAIDAGRRLADWGVGQAAWKASSTPAARRVAPPNSGYDLTRPGALD
HHCCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
SLRSRLSTRYANIDGATRAGPMDEADSLQQLDRNLVHVLARRPLGIQGADRLMARLPFLE
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHH
AAGRHDDDREIMLLVAHLSGAVLDDALLPLPVRSTLASLQAPLLRVALREPRVLEDHSHP
HCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCH
IWQMMIRLASHTAGFQDDDDPRLCALLLDVEVLFTRLQAATPAIAVHAQALTALDSLLVG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ELDAERREAAAPIAKLQAAARRVTMVEALRRQVRLELQDATSPWRIEGSTPARPAAAVVL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHH
DETLQHFLTGPWPEVLAHALINDGEQADTTRGLLAVVPDLLASLAPLRSEDDRRRLVAAV
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
PGLVQRLQQGMARIATPPSQRDAVLATLMACHTDLLRPIGSAAVSLTPEEIVRRMREEEL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDEPAPRTPAGDSMFDIATLDTVPAALMPEAPVAGARGWLQHLAVGTWCRLVARGDWTVA
CCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
RVLWVDESREHWLFSDAELGLTHGLTRRALERLADGGLAGPLEQRNLIERAVDALMAPPR
EEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
GRDTTLG
CCCCCCC
>Mature Secondary Structure
MDVSPLLQRYLDSCLAEVPRWMSRVANEALQALHAPTTRSALRELPARPRDDAELALRHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCC
HPLWARRVGELLGSRWRSEIEAGAPDAGATLSPRPAWSAEALTLVDEAEAEENIELLRAV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QLVDHAAEHELHELQSRTATLRGQDAVRATSNLLRPELLVRAVWDASEVLGLGAPARKAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MRASGEPLAQALKQVAIDAGRRLADWGVGQAAWKASSTPAARRVAPPNSGYDLTRPGALD
HHCCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
SLRSRLSTRYANIDGATRAGPMDEADSLQQLDRNLVHVLARRPLGIQGADRLMARLPFLE
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHH
AAGRHDDDREIMLLVAHLSGAVLDDALLPLPVRSTLASLQAPLLRVALREPRVLEDHSHP
HCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCH
IWQMMIRLASHTAGFQDDDDPRLCALLLDVEVLFTRLQAATPAIAVHAQALTALDSLLVG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ELDAERREAAAPIAKLQAAARRVTMVEALRRQVRLELQDATSPWRIEGSTPARPAAAVVL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHH
DETLQHFLTGPWPEVLAHALINDGEQADTTRGLLAVVPDLLASLAPLRSEDDRRRLVAAV
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
PGLVQRLQQGMARIATPPSQRDAVLATLMACHTDLLRPIGSAAVSLTPEEIVRRMREEEL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDEPAPRTPAGDSMFDIATLDTVPAALMPEAPVAGARGWLQHLAVGTWCRLVARGDWTVA
CCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
RVLWVDESREHWLFSDAELGLTHGLTRRALERLADGGLAGPLEQRNLIERAVDALMAPPR
EEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
GRDTTLG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA