Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is mhpD2 [H]
Identifier: 124265601
GI number: 124265601
Start: 442622
End: 443452
Strand: Direct
Name: mhpD2 [H]
Synonym: Mpe_A0408
Alternate gene names: 124265601
Gene position: 442622-443452 (Clockwise)
Preceding gene: 124265598
Following gene: 124265603
Centisome position: 10.94
GC content: 71.96
Gene sequence:
>831_bases ATGTCGATGACCATCGCACCGCCTTCTCTCGATGCCCTGGCTCGGCAGATCCAGACCGCACAGGACGCGACCCGGCAGAT CGAGCCCTTCACGTCGCAGCTCGACGGCTTCGACGTGCCGGCCGCGTACGCGGTGGCGCAGCTCGTGCACGAGGCACGGC TGCGGGAAGGCGCGCGCGCGATCGGTCGCAAGATCGGCTTCACCAACCCGGACATGTGGTCGCTGTACGGCGTGCGCGAC CCGGTATGGGCCCACGTCTACGACCGGACCGTGGTGCGCGTGGCGGGCGGACGGCACGTGTGCCGGCTGGCGCCGTTCAC CGAGCCGAAGATCGAGCCCGAGATCGTGCTGCACTTCCATCGCGCGCCGCCGGCGGGTGCCGACGCGGCCGCACTGCTGG ACTGCATCGACTGGGTGGCGCATGCGTTCGAGATCGTGCAGTCGCATTTCCCGGGCTGGAAATTCCGCGCTGCCGATACG GTGGCCGACGCCGCGCTGCACGGCGCGCTGCTGGTCGGCGAGCCGCAGCCGGTGGCTCGCCTGCAGCCAGGCCTGCGCTC GGCGTTGGCGGCCTTTTCCTTGGAGCTGGTGTGCGACGGCGCGGTGCGCGAGGTGGGCGTGGGCGCCAACGTGCTGGGCA GCCCGCTGGCCGCGCTGGCGCACCTGGCCGGCGTGCTGTCGCGTCAGCCGCAGGCGCTGCCGCTGCAGGCCGGCGAACTG GTGACCACCGGCACGCTCACCACCGCGCAGCCGGTGCGTGCGGGGCAGACCTGGCACACGGTGCTGCGTGGCATCGATCT GCCGGGGCTGGCGGTCGAGTTCGTCGACTGA
Upstream 100 bases:
>100_bases ATCAAGACTGCGGTTCGAACAGGAAAAGGGATTGACTTCGTTCGACCGCCGCCGCTAGCGTGCCGCTGTCGATTTCGAGC GACGCCTCGGGGATGCACGC
Downstream 100 bases:
>100_bases CGTGCCCGCGGCGCGGTGCGGCGCCGCGGGGTTCTCGGCGGCTCCTCAGCCCAGCGGCGGATTGGCCGGCATGCGGGCCC GGCTCGGATCCTGCGCCACC
Product: putative decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 2 [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSMTIAPPSLDALARQIQTAQDATRQIEPFTSQLDGFDVPAAYAVAQLVHEARLREGARAIGRKIGFTNPDMWSLYGVRD PVWAHVYDRTVVRVAGGRHVCRLAPFTEPKIEPEIVLHFHRAPPAGADAAALLDCIDWVAHAFEIVQSHFPGWKFRAADT VADAALHGALLVGEPQPVARLQPGLRSALAAFSLELVCDGAVREVGVGANVLGSPLAALAHLAGVLSRQPQALPLQAGEL VTTGTLTTAQPVRAGQTWHTVLRGIDLPGLAVEFVD
Sequences:
>Translated_276_residues MSMTIAPPSLDALARQIQTAQDATRQIEPFTSQLDGFDVPAAYAVAQLVHEARLREGARAIGRKIGFTNPDMWSLYGVRD PVWAHVYDRTVVRVAGGRHVCRLAPFTEPKIEPEIVLHFHRAPPAGADAAALLDCIDWVAHAFEIVQSHFPGWKFRAADT VADAALHGALLVGEPQPVARLQPGLRSALAAFSLELVCDGAVREVGVGANVLGSPLAALAHLAGVLSRQPQALPLQAGEL VTTGTLTTAQPVRAGQTWHTVLRGIDLPGLAVEFVD >Mature_275_residues SMTIAPPSLDALARQIQTAQDATRQIEPFTSQLDGFDVPAAYAVAQLVHEARLREGARAIGRKIGFTNPDMWSLYGVRDP VWAHVYDRTVVRVAGGRHVCRLAPFTEPKIEPEIVLHFHRAPPAGADAAALLDCIDWVAHAFEIVQSHFPGWKFRAADTV ADAALHGALLVGEPQPVARLQPGLRSALAAFSLELVCDGAVREVGVGANVLGSPLAALAHLAGVLSRQPQALPLQAGELV TTGTLTTAQPVRAGQTWHTVLRGIDLPGLAVEFVD
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=258, Percent_Identity=28.2945736434109, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 29463; Mature: 29332
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTIAPPSLDALARQIQTAQDATRQIEPFTSQLDGFDVPAAYAVAQLVHEARLREGARA CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IGRKIGFTNPDMWSLYGVRDPVWAHVYDRTVVRVAGGRHVCRLAPFTEPKIEPEIVLHFH HHHHCCCCCCCCEEECCCCCCHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCEEEEEEE RAPPAGADAAALLDCIDWVAHAFEIVQSHFPGWKFRAADTVADAALHGALLVGEPQPVAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCEEEECCCCCHHH LQPGLRSALAAFSLELVCDGAVREVGVGANVLGSPLAALAHLAGVLSRQPQALPLQAGEL HCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VTTGTLTTAQPVRAGQTWHTVLRGIDLPGLAVEFVD EECCCCCCCCCHHCCHHHHHHHHCCCCCCCEEEECC >Mature Secondary Structure SMTIAPPSLDALARQIQTAQDATRQIEPFTSQLDGFDVPAAYAVAQLVHEARLREGARA CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IGRKIGFTNPDMWSLYGVRDPVWAHVYDRTVVRVAGGRHVCRLAPFTEPKIEPEIVLHFH HHHHCCCCCCCCEEECCCCCCHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCEEEEEEE RAPPAGADAAALLDCIDWVAHAFEIVQSHFPGWKFRAADTVADAALHGALLVGEPQPVAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCEEEECCCCCHHH LQPGLRSALAAFSLELVCDGAVREVGVGANVLGSPLAALAHLAGVLSRQPQALPLQAGEL HCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VTTGTLTTAQPVRAGQTWHTVLRGIDLPGLAVEFVD EECCCCCCCCCHHCCHHHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA