Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yibF [C]

Identifier: 124265598

GI number: 124265598

Start: 441160

End: 441813

Strand: Direct

Name: yibF [C]

Synonym: Mpe_A0405

Alternate gene names: 124265598

Gene position: 441160-441813 (Clockwise)

Preceding gene: 124265597

Following gene: 124265601

Centisome position: 10.91

GC content: 72.32

Gene sequence:

>654_bases
ATGCAACTCATTGGCATGCTCGATTCGCCCTACGTCCGCCGCGTCGCGGTGTCGCTGCAGCTGCTGGGGCTGCCGTTCGA
GCACCGCTCGATCTCGGTGTTCCGGGGCTTCGACACGTTTCGCCAGATCAGCCCGGTGGTCAAGGCGCCGTCGCTGGTGT
GCGATGACGGCAGCGTGCTGCTCGACTCGAACCTGATCCTCGAACACGCCGAGACGCTGGCGGCGGCCCTGCCCGCGGCG
CGGCGCCGCAGCCTGATGCCGGCCGACCCGGCCGCGCGGCTGCGCACGCTGAGCCTGCTGGGCCTGGCGCTCGCTGCCTG
CGAGAAGAGCGTGCAGATCGTCTACGAGAACCTGCGCCCGGCCGACAAGGTGCATGCGCCGTGGTTCGACCGCGTCAGCG
GCCAGCTGCGCGTGGCCTACGGCGAACTGGAGGCTGCGCTGGCGCAGCGGCCGCTGGCGGTGGACAGCGACCACATCGAC
CAGGCCGGCGTCTCCATCGCGGTTGCCTGGCGCTTCACGCAGGCGCTGATCCCCGAGATGGTGGACGCCGCGGCACATCC
GCGGCTCGCCGCGCATGCGGCGCAGGCCGAGGCGCTGCCGGCCTTCCGTGCCGCGCCCCACGGCGAGGGCAGCTACCCGG
CCGCGACCGTGTAG

Upstream 100 bases:

>100_bases
CCGATCGTCGTCCCCCCGCCGATCCGGAAGTAGCGCCGGGAAAGCCCGAAACCTCCGCAGCGCTGTCTTCTCTCTTCGTC
CGCCATCGGAGTCCGTGACC

Downstream 100 bases:

>100_bases
CGCCGGCCGGCGCATCGCCGTCTCATCTCGCGTGTGACGGCGGTGCGCTAGATGTCGGGGCCACGCGCGAACTCGTCGTA
GGCGGCCACCGCATGGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutathione Transferase; Glutathione S-Transferase-Like; Glutathione S-Transferase Related Protein; Glutathione S-Transferase Like Protein; S-Transferase; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MQLIGMLDSPYVRRVAVSLQLLGLPFEHRSISVFRGFDTFRQISPVVKAPSLVCDDGSVLLDSNLILEHAETLAAALPAA
RRRSLMPADPAARLRTLSLLGLALAACEKSVQIVYENLRPADKVHAPWFDRVSGQLRVAYGELEAALAQRPLAVDSDHID
QAGVSIAVAWRFTQALIPEMVDAAAHPRLAAHAAQAEALPAFRAAPHGEGSYPAATV

Sequences:

>Translated_217_residues
MQLIGMLDSPYVRRVAVSLQLLGLPFEHRSISVFRGFDTFRQISPVVKAPSLVCDDGSVLLDSNLILEHAETLAAALPAA
RRRSLMPADPAARLRTLSLLGLALAACEKSVQIVYENLRPADKVHAPWFDRVSGQLRVAYGELEAALAQRPLAVDSDHID
QAGVSIAVAWRFTQALIPEMVDAAAHPRLAAHAAQAEALPAFRAAPHGEGSYPAATV
>Mature_217_residues
MQLIGMLDSPYVRRVAVSLQLLGLPFEHRSISVFRGFDTFRQISPVVKAPSLVCDDGSVLLDSNLILEHAETLAAALPAA
RRRSLMPADPAARLRTLSLLGLALAACEKSVQIVYENLRPADKVHAPWFDRVSGQLRVAYGELEAALAQRPLAVDSDHID
QAGVSIAVAWRFTQALIPEMVDAAAHPRLAAHAAQAEALPAFRAAPHGEGSYPAATV

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790018, Length=170, Percent_Identity=27.0588235294118, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23327; Mature: 23327

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIGMLDSPYVRRVAVSLQLLGLPFEHRSISVFRGFDTFRQISPVVKAPSLVCDDGSVL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCEE
LDSNLILEHAETLAAALPAARRRSLMPADPAARLRTLSLLGLALAACEKSVQIVYENLRP
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ADKVHAPWFDRVSGQLRVAYGELEAALAQRPLAVDSDHIDQAGVSIAVAWRFTQALIPEM
HHHCCCCHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHCCCEEEEHHHHHHHHHHHH
VDAAAHPRLAAHAAQAEALPAFRAAPHGEGSYPAATV
HHHHCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLIGMLDSPYVRRVAVSLQLLGLPFEHRSISVFRGFDTFRQISPVVKAPSLVCDDGSVL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCEE
LDSNLILEHAETLAAALPAARRRSLMPADPAARLRTLSLLGLALAACEKSVQIVYENLRP
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ADKVHAPWFDRVSGQLRVAYGELEAALAQRPLAVDSDHIDQAGVSIAVAWRFTQALIPEM
HHHCCCCHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHCCCEEEEHHHHHHHHHHHH
VDAAAHPRLAAHAAQAEALPAFRAAPHGEGSYPAATV
HHHHCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA