Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265562
Identifier: 124265562
GI number: 124265562
Start: 407048
End: 407602
Strand: Direct
Name: 124265562
Synonym: Mpe_A0369
Alternate gene names: NA
Gene position: 407048-407602 (Clockwise)
Preceding gene: 124265560
Following gene: 124265563
Centisome position: 10.06
GC content: 69.73
Gene sequence:
>555_bases ATGTCGCTGCTGCAACTGCGCAAGCTGGTGGTCCAGCTCGAGGAGATCCACACCGAGATCGGCCGCCCGGTCGACCCGCC TGCCCGCAAGGTGGTGGTGGCCGCCGTGGTGAAGAACCCCTATGCCGGCCGCTACGTGGAGGACCTTTCGCCGCTGTACG AGCTGGGCGCCGAGCTCGGCGACCTGCTCGGCCGCCGCGGCGTGCAGGCGCTGGGCGTGGCGCCCGACGCGGTGCAGAGC TACGGCAAGGGCGCCATCGTGGGCCTGGACGGCGAGATCGAGCACGCCGCGGCCATCCTGCACCCGAAGTTCGGCGCGCC GGTGCGCCGCGCGGTGCACAAGGGCGAGGCCATCATCCCCGGCAGCAAAAAGATGGGCGGGCCGGGCTCGCTGATCGTGA TGCCGGTGACCAACAAGAACGACATCTGGAATTTCGACGACATGGATGGCGCGGAGATCGCCATCGCCGACGCGCCGCAT CCCGACGAGATGCTGGTGGCGCTGGTGCTGGCCATCGGCGGGCGACCGCTCCATCGTGTGAGGAAGCCCGCATGA
Upstream 100 bases:
>100_bases CGCCATGAAGTTTCGTTTTTCAGCGGCTTTCGATCCGCCTAGAGTGAAACGCTGACGTTCCCGTTTTCCCCCTCCCTTGT CTTCCAGGACGAACCCGACG
Downstream 100 bases:
>100_bases GTGCGAAGGAGACCTCCATGTTCTTCAAGGCCATCATCCTCCTCAAGCGTCGCGAGGACATGAGCGCGCAGGACTTCGCC GCGTGGTGGCTGGGCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSLLQLRKLVVQLEEIHTEIGRPVDPPARKVVVAAVVKNPYAGRYVEDLSPLYELGAELGDLLGRRGVQALGVAPDAVQS YGKGAIVGLDGEIEHAAAILHPKFGAPVRRAVHKGEAIIPGSKKMGGPGSLIVMPVTNKNDIWNFDDMDGAEIAIADAPH PDEMLVALVLAIGGRPLHRVRKPA
Sequences:
>Translated_184_residues MSLLQLRKLVVQLEEIHTEIGRPVDPPARKVVVAAVVKNPYAGRYVEDLSPLYELGAELGDLLGRRGVQALGVAPDAVQS YGKGAIVGLDGEIEHAAAILHPKFGAPVRRAVHKGEAIIPGSKKMGGPGSLIVMPVTNKNDIWNFDDMDGAEIAIADAPH PDEMLVALVLAIGGRPLHRVRKPA >Mature_183_residues SLLQLRKLVVQLEEIHTEIGRPVDPPARKVVVAAVVKNPYAGRYVEDLSPLYELGAELGDLLGRRGVQALGVAPDAVQSY GKGAIVGLDGEIEHAAAILHPKFGAPVRRAVHKGEAIIPGSKKMGGPGSLIVMPVTNKNDIWNFDDMDGAEIAIADAPHP DEMLVALVLAIGGRPLHRVRKPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19575; Mature: 19444
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLQLRKLVVQLEEIHTEIGRPVDPPARKVVVAAVVKNPYAGRYVEDLSPLYELGAELG CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH DLLGRRGVQALGVAPDAVQSYGKGAIVGLDGEIEHAAAILHPKFGAPVRRAVHKGEAIIP HHHHHCCCHHHCCCHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHCCCEECC GSKKMGGPGSLIVMPVTNKNDIWNFDDMDGAEIAIADAPHPDEMLVALVLAIGGRPLHRV CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHH RKPA CCCC >Mature Secondary Structure SLLQLRKLVVQLEEIHTEIGRPVDPPARKVVVAAVVKNPYAGRYVEDLSPLYELGAELG CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH DLLGRRGVQALGVAPDAVQSYGKGAIVGLDGEIEHAAAILHPKFGAPVRRAVHKGEAIIP HHHHHCCCHHHCCCHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHCCCEECC GSKKMGGPGSLIVMPVTNKNDIWNFDDMDGAEIAIADAPHPDEMLVALVLAIGGRPLHRV CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHH RKPA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA