Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265560
Identifier: 124265560
GI number: 124265560
Start: 404795
End: 406054
Strand: Direct
Name: 124265560
Synonym: Mpe_A0367
Alternate gene names: NA
Gene position: 404795-406054 (Clockwise)
Preceding gene: 124265559
Following gene: 124265562
Centisome position: 10.01
GC content: 72.38
Gene sequence:
>1260_bases ATGACCGACCCCACGATCGACTGGATCGCCGCCGCCCTCTTCGGTGTGGCCCTCGTCCACACCTTCGCTGCCAAGCAGCT CGAGCGCCTCTCGCACCGCCATCCGCGCCACGCCGGCCTGTTCCACCTGCTGGGCGAGGTGGAGGTGGTGTTCGGCTTCT GGGCCATCGTGCTGGTGCTGGTCATGGCGCTCGTCGCCGGCCGCGGCGCGGCGCTCGACTACGCCGAATCGCGCAACTAC ACCGAACCGCTGTTCGTCTTCGTCGTGATGGTGGTGGCGGCCTCGCGGCCGGTGCTGCAGACCGTGATGCGTGCCGTGGG CGCGATCGCGCGGCTCGCGCCGCTGCCCACGCCGCTGGTGTCGGCCTGGCTGGGCCTGGCCGCGGTGCCCCTGCTCGGTT CGCTGATCACCGAGCCTGCCGCCATGACCATCGCGGCGCTGCTGCTCGCGCCGCTGGTGTTCCGGCCCGGCGTGCCCGAG CGCATCAAGTACCTGGCGCTGGGCGTGCTGTTCGTCAACGTGTCGATCGGCGGCACGCTCACCTCCTACGCCGCGCCGCC GGTGCTGATGGTGGCCGCCGCCTGGCAATGGGACAGCGCCTTCATGCTGGCGAACTTCGGCTGGAAGGCGGCGCTTGCCG TGCTGGTGAACGCCTCGGTGGCCGCCTTCCTGCTGCGCCGGCACCTGGTGGCCGGGCCCGACGAAGCGGGCGCCGCCGGT GCGGAGCCGGTGCCGCTGGCGGTGGTGGGGGTCCACCTGGCGCTGCTGGCCGGCGTGGTGATGCTGGCCCATCACCCGGT GGCCTTCCTGGCGCTGTTCCTGCTGTTCCTCGGGTTCACGCAGGCCTACGCGCGCCACCAGGACCCGCTGATCCTGAAGG AAGCGCTGCTGGTGGGTTTCTTCCTCGCGGGCCTGGTGGTGCTCGGCGGCCTGCAGCGCTGGTGGCTGCAGCCCATCGTG GCGGGGCTGGAGCCGCTGGCGCTGTTCTTCGGCGCGCTGGCGCTCACGGCCGTGACCGACAACGCGGCGCTCACCTACCT GGGCTCGCTCATCTCCGGCATCTCCGACGCGTCGAAGTACATGCTGGTGGCCGGTGCGGTGGCGGGCGGCGGGCTGACGG TCATCGCCAACGCGCCCAACCCGGCCGGCGTGGCGCTGCTCAAGCGCGGCTTCGCCGACGAATCGGTCGGCGCCGGCGGC CTGCTGCTCGGCGCTCTGGGCCCCACGCTGGTGGCTGCCGCCGCCTTCCTGCTGCTCTGA
Upstream 100 bases:
>100_bases CGCCCCGTACACTCCCCCCGGGTGTCGGACCGCGAGCGCGGTGCGGCAGGTTCATGCGAAGGTCGGGCCGCCTCGCGGTT GCTTCACGACCCTGCTGCCC
Downstream 100 bases:
>100_bases CGCGCTAGCCCCTCACCCGCCTCAACGGCCCCCGCATCTGCTCCCCCAGACGCTGCGCCAGCGCCGCGTCGGTGGCCGGC GAGGCGGCCAGGATGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTDPTIDWIAAALFGVALVHTFAAKQLERLSHRHPRHAGLFHLLGEVEVVFGFWAIVLVLVMALVAGRGAALDYAESRNY TEPLFVFVVMVVAASRPVLQTVMRAVGAIARLAPLPTPLVSAWLGLAAVPLLGSLITEPAAMTIAALLLAPLVFRPGVPE RIKYLALGVLFVNVSIGGTLTSYAAPPVLMVAAAWQWDSAFMLANFGWKAALAVLVNASVAAFLLRRHLVAGPDEAGAAG AEPVPLAVVGVHLALLAGVVMLAHHPVAFLALFLLFLGFTQAYARHQDPLILKEALLVGFFLAGLVVLGGLQRWWLQPIV AGLEPLALFFGALALTAVTDNAALTYLGSLISGISDASKYMLVAGAVAGGGLTVIANAPNPAGVALLKRGFADESVGAGG LLLGALGPTLVAAAAFLLL
Sequences:
>Translated_419_residues MTDPTIDWIAAALFGVALVHTFAAKQLERLSHRHPRHAGLFHLLGEVEVVFGFWAIVLVLVMALVAGRGAALDYAESRNY TEPLFVFVVMVVAASRPVLQTVMRAVGAIARLAPLPTPLVSAWLGLAAVPLLGSLITEPAAMTIAALLLAPLVFRPGVPE RIKYLALGVLFVNVSIGGTLTSYAAPPVLMVAAAWQWDSAFMLANFGWKAALAVLVNASVAAFLLRRHLVAGPDEAGAAG AEPVPLAVVGVHLALLAGVVMLAHHPVAFLALFLLFLGFTQAYARHQDPLILKEALLVGFFLAGLVVLGGLQRWWLQPIV AGLEPLALFFGALALTAVTDNAALTYLGSLISGISDASKYMLVAGAVAGGGLTVIANAPNPAGVALLKRGFADESVGAGG LLLGALGPTLVAAAAFLLL >Mature_418_residues TDPTIDWIAAALFGVALVHTFAAKQLERLSHRHPRHAGLFHLLGEVEVVFGFWAIVLVLVMALVAGRGAALDYAESRNYT EPLFVFVVMVVAASRPVLQTVMRAVGAIARLAPLPTPLVSAWLGLAAVPLLGSLITEPAAMTIAALLLAPLVFRPGVPER IKYLALGVLFVNVSIGGTLTSYAAPPVLMVAAAWQWDSAFMLANFGWKAALAVLVNASVAAFLLRRHLVAGPDEAGAAGA EPVPLAVVGVHLALLAGVVMLAHHPVAFLALFLLFLGFTQAYARHQDPLILKEALLVGFFLAGLVVLGGLQRWWLQPIVA GLEPLALFFGALALTAVTDNAALTYLGSLISGISDASKYMLVAGAVAGGGLTVIANAPNPAGVALLKRGFADESVGAGGL LLGALGPTLVAAAAFLLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43486; Mature: 43355
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPTIDWIAAALFGVALVHTFAAKQLERLSHRHPRHAGLFHLLGEVEVVFGFWAIVLVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VMALVAGRGAALDYAESRNYTEPLFVFVVMVVAASRPVLQTVMRAVGAIARLAPLPTPLV HHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH SAWLGLAAVPLLGSLITEPAAMTIAALLLAPLVFRPGVPERIKYLALGVLFVNVSIGGTL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCH TSYAAPPVLMVAAAWQWDSAFMLANFGWKAALAVLVNASVAAFLLRRHLVAGPDEAGAAG HHHCCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AEPVPLAVVGVHLALLAGVVMLAHHPVAFLALFLLFLGFTQAYARHQDPLILKEALLVGF CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FLAGLVVLGGLQRWWLQPIVAGLEPLALFFGALALTAVTDNAALTYLGSLISGISDASKY HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MLVAGAVAGGGLTVIANAPNPAGVALLKRGFADESVGAGGLLLGALGPTLVAAAAFLLL HHHEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TDPTIDWIAAALFGVALVHTFAAKQLERLSHRHPRHAGLFHLLGEVEVVFGFWAIVLVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VMALVAGRGAALDYAESRNYTEPLFVFVVMVVAASRPVLQTVMRAVGAIARLAPLPTPLV HHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH SAWLGLAAVPLLGSLITEPAAMTIAALLLAPLVFRPGVPERIKYLALGVLFVNVSIGGTL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCH TSYAAPPVLMVAAAWQWDSAFMLANFGWKAALAVLVNASVAAFLLRRHLVAGPDEAGAAG HHHCCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AEPVPLAVVGVHLALLAGVVMLAHHPVAFLALFLLFLGFTQAYARHQDPLILKEALLVGF CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FLAGLVVLGGLQRWWLQPIVAGLEPLALFFGALALTAVTDNAALTYLGSLISGISDASKY HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MLVAGAVAGGGLTVIANAPNPAGVALLKRGFADESVGAGGLLLGALGPTLVAAAAFLLL HHHEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA