Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is phbI [H]
Identifier: 124265519
GI number: 124265519
Start: 350084
End: 351919
Strand: Direct
Name: phbI [H]
Synonym: Mpe_A0326
Alternate gene names: 124265519
Gene position: 350084-351919 (Clockwise)
Preceding gene: 124265517
Following gene: 124265520
Centisome position: 8.66
GC content: 67.27
Gene sequence:
>1836_bases ATGTGCGCCGTGGTAACCCCTGCCGGCAGCTGGACGGGCCGCTGCTACGATCGATTCATGAGCCTGCAGATGTTCGGAAT TCCGGTCTCGCGCGGCGTGGCCATTGGCCGCGCCGTGCTGGTCGCGTCCAGTCGCGTGGACGTGGCCCACTACTTCATCG AGCCGGCGCAGGTCGAGCGCGAGATCGCGCGGCTGCTGCAGGCGCGCGACGCGGTGGCGGCCGAGCTCGGCGGCCTCCAG CGCGACCTGCCAGAGGACGCGCCCGCGGAACTGTCCGCGCTGCTCGACGTGCACCTGATGCTGCTGCACGACGAGGCGCT GACCGGCGCCACGTCGCAATGGGTGCACGAGCGGCACTACAACGCGGAATGGGCGCTGTCGGCCCAGCTGGAAGTGCTGG CGCGGCATTTCGACGACATGGAAAATGATTACCTGCGTGAGCGCAAGGCCGACCTTGAACAGGTGGTCGAGCGCTTGTTG CGTGTGCTGATGCACGACAGCAGCGCCGTACCGCCGTCGATCGGAGTCAACCCGCGCGACTTCGCCGGCGAGGACCCGCT GGTGCTGGTGGCCAACGACATCGCGCCGGCCGACATGCTGCAATTCAAGCGCAGCGTCTTCACCGGTTTTGTCACCGACG TCGGCGGCAAGACCTCGCACACGGCCATCGTCGCCCGCAGCCTCGACATTCCGGCGGTGGTGGGGGCCCGTGAGGCCAGC CGCATCATCCGGCAGGATGACTGGGTGGTGATCGACGGTGACGCCGGAGTCGTGATTGTCGATCCGTCGTCGATCGTGCT GGAGGAATACCGCTTTCGCCAGCGGCAGAGCGAACTGGAGCGTGTGCGGCTTACGCGCCTGCGGCATACACCCGCCGTCA CGCTGGACGGTGAGCGGGTCGAGCTGTTTGCCAATATCGAGCTCCCTGGCGACGCGGCCGCGGCACTGGAGGCCGGGGCG GTCGGCGTCGGGCTGTTTCGTAGCGAATTCCTCTTCATGAACCGGACCGACGACCTGCCCGGCGAGGATGAGCAGTACCA GGCGTACTGCGCAGTGGTCGATGCGATGAAAGGTCTGCCGGTGACGATCCGGACGGTCGATATTGGCGCCGACAAGCCGC TCGACCGGATGTCGGCCCACGAACTGCGGCACGAGCATGCGCTCAACCCCGCGCTCGGCTTGCGCGCGATCCGCTGGAGC CTGTCCGAGCCCAGCATGTTCCGCCAGCAGCTGCGCGCCATCCTGCGCGCCAGTGCGCATGGTCAGGTGCGTTTGCTGGT GCCGATGCTCGCGCACGAGTCCGAGATTCGCGGCACTTTCGATGCGCTGGCGCGCGCGAAGCAGCAGTTGACGGAATCAG GGCGCGCGTTCGGCGATGTCCAGGTGGGCGCGATGATCGAAGTGCCCGCCGCGGCGTTGATGATCGATCGCTTTCTCGAT GCCTTCGATTTCGTGTCGCTCGGCACCAATGATCTGATCCAGTACACGCTGGCCATCGACCGAGCCGATGAGGCCGTCGC CCACCTGTACGATCCCTGGCACCCCGCCGTGCTGGAGCTCGTCGCCAGAACCATTCGCGCAGCAAGAGCGCGCGGCAGGG CGGTCAGCGTGTGCGGAGAGATGGCCGGTGACCCGAGCTTCACTTCTGTCCTGCTGGCCATGGGCCTGCGCAGCTTTTCC ATGCACCCGTCGCAGATCGCTGCGATCAAGCAGCAGATCCTGCGCACGGACACGCGGCGGCTGAGCGATCTGCTATTGGG GGCCAGGAGCGACGCTCCGACGTTCACGCCGCTGCGGAACGGCGGGGGCGTGGCGGCGACGCCCCCGCGGCCTTGA
Upstream 100 bases:
>100_bases CGCTCCTTGTTCGGCAATGGCGACGAGCTTGAGTCAGCCGCGTGACGACGCGATGTAGCTCCGATGACGCGCCGATGACA CGCGCACAGGGTCCGGGTCG
Downstream 100 bases:
>100_bases AGACTGCATCAACAATTTCGTCGACGACCTTGCGCGGCGGAAAAACTTCGTGCTACAGTAGCTGTCTTCGCTGAACACAG CGCCTCGCCGGAAACGGCAG
Product: phosphoenolpyruvate--protein phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase system, enzyme I; Protein I [H]
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MCAVVTPAGSWTGRCYDRFMSLQMFGIPVSRGVAIGRAVLVASSRVDVAHYFIEPAQVEREIARLLQARDAVAAELGGLQ RDLPEDAPAELSALLDVHLMLLHDEALTGATSQWVHERHYNAEWALSAQLEVLARHFDDMENDYLRERKADLEQVVERLL RVLMHDSSAVPPSIGVNPRDFAGEDPLVLVANDIAPADMLQFKRSVFTGFVTDVGGKTSHTAIVARSLDIPAVVGAREAS RIIRQDDWVVIDGDAGVVIVDPSSIVLEEYRFRQRQSELERVRLTRLRHTPAVTLDGERVELFANIELPGDAAAALEAGA VGVGLFRSEFLFMNRTDDLPGEDEQYQAYCAVVDAMKGLPVTIRTVDIGADKPLDRMSAHELRHEHALNPALGLRAIRWS LSEPSMFRQQLRAILRASAHGQVRLLVPMLAHESEIRGTFDALARAKQQLTESGRAFGDVQVGAMIEVPAAALMIDRFLD AFDFVSLGTNDLIQYTLAIDRADEAVAHLYDPWHPAVLELVARTIRAARARGRAVSVCGEMAGDPSFTSVLLAMGLRSFS MHPSQIAAIKQQILRTDTRRLSDLLLGARSDAPTFTPLRNGGGVAATPPRP
Sequences:
>Translated_611_residues MCAVVTPAGSWTGRCYDRFMSLQMFGIPVSRGVAIGRAVLVASSRVDVAHYFIEPAQVEREIARLLQARDAVAAELGGLQ RDLPEDAPAELSALLDVHLMLLHDEALTGATSQWVHERHYNAEWALSAQLEVLARHFDDMENDYLRERKADLEQVVERLL RVLMHDSSAVPPSIGVNPRDFAGEDPLVLVANDIAPADMLQFKRSVFTGFVTDVGGKTSHTAIVARSLDIPAVVGAREAS RIIRQDDWVVIDGDAGVVIVDPSSIVLEEYRFRQRQSELERVRLTRLRHTPAVTLDGERVELFANIELPGDAAAALEAGA VGVGLFRSEFLFMNRTDDLPGEDEQYQAYCAVVDAMKGLPVTIRTVDIGADKPLDRMSAHELRHEHALNPALGLRAIRWS LSEPSMFRQQLRAILRASAHGQVRLLVPMLAHESEIRGTFDALARAKQQLTESGRAFGDVQVGAMIEVPAAALMIDRFLD AFDFVSLGTNDLIQYTLAIDRADEAVAHLYDPWHPAVLELVARTIRAARARGRAVSVCGEMAGDPSFTSVLLAMGLRSFS MHPSQIAAIKQQILRTDTRRLSDLLLGARSDAPTFTPLRNGGGVAATPPRP >Mature_611_residues MCAVVTPAGSWTGRCYDRFMSLQMFGIPVSRGVAIGRAVLVASSRVDVAHYFIEPAQVEREIARLLQARDAVAAELGGLQ RDLPEDAPAELSALLDVHLMLLHDEALTGATSQWVHERHYNAEWALSAQLEVLARHFDDMENDYLRERKADLEQVVERLL RVLMHDSSAVPPSIGVNPRDFAGEDPLVLVANDIAPADMLQFKRSVFTGFVTDVGGKTSHTAIVARSLDIPAVVGAREAS RIIRQDDWVVIDGDAGVVIVDPSSIVLEEYRFRQRQSELERVRLTRLRHTPAVTLDGERVELFANIELPGDAAAALEAGA VGVGLFRSEFLFMNRTDDLPGEDEQYQAYCAVVDAMKGLPVTIRTVDIGADKPLDRMSAHELRHEHALNPALGLRAIRWS LSEPSMFRQQLRAILRASAHGQVRLLVPMLAHESEIRGTFDALARAKQQLTESGRAFGDVQVGAMIEVPAAALMIDRFLD AFDFVSLGTNDLIQYTLAIDRADEAVAHLYDPWHPAVLELVARTIRAARARGRAVSVCGEMAGDPSFTSVLLAMGLRSFS MHPSQIAAIKQQILRTDTRRLSDLLLGARSDAPTFTPLRNGGGVAATPPRP
Specific function: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their tr
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=554, Percent_Identity=38.8086642599278, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI48994992, Length=505, Percent_Identity=34.6534653465347, Blast_Score=270, Evalue=1e-73, Organism=Escherichia coli, GI1788726, Length=569, Percent_Identity=31.2829525483304, Blast_Score=263, Evalue=3e-71, Organism=Escherichia coli, GI1789193, Length=569, Percent_Identity=32.8646748681898, Blast_Score=257, Evalue=2e-69, Organism=Escherichia coli, GI1787994, Length=399, Percent_Identity=26.3157894736842, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI226510935, Length=195, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 67050; Mature: 67050
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAVVTPAGSWTGRCYDRFMSLQMFGIPVSRGVAIGRAVLVASSRVDVAHYFIEPAQVER CEEEECCCCCCCHHHHHHHHHHHHCCCCHHCCHHHHHHHEEECCCCHHHHHHCCHHHHHH EIARLLQARDAVAAELGGLQRDLPEDAPAELSALLDVHLMLLHDEALTGATSQWVHERHY HHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC NAEWALSAQLEVLARHFDDMENDYLRERKADLEQVVERLLRVLMHDSSAVPPSIGVNPRD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FAGEDPLVLVANDIAPADMLQFKRSVFTGFVTDVGGKTSHTAIVARSLDIPAVVGAREAS CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCHHHH RIIRQDDWVVIDGDAGVVIVDPSSIVLEEYRFRQRQSELERVRLTRLRHTPAVTLDGERV HHHCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEE ELFANIELPGDAAAALEAGAVGVGLFRSEFLFMNRTDDLPGEDEQYQAYCAVVDAMKGLP EEEEEEECCCCHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC VTIRTVDIGADKPLDRMSAHELRHEHALNPALGLRAIRWSLSEPSMFRQQLRAILRASAH EEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC GQVRLLVPMLAHESEIRGTFDALARAKQQLTESGRAFGDVQVGAMIEVPAAALMIDRFLD CCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEECHHHHHHHHHHHH AFDFVSLGTNDLIQYTLAIDRADEAVAHLYDPWHPAVLELVARTIRAARARGRAVSVCGE HHHHHHCCCHHHEEEHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH MAGDPSFTSVLLAMGLRSFSMHPSQIAAIKQQILRTDTRRLSDLLLGARSDAPTFTPLRN HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC GGGVAATPPRP CCCCCCCCCCC >Mature Secondary Structure MCAVVTPAGSWTGRCYDRFMSLQMFGIPVSRGVAIGRAVLVASSRVDVAHYFIEPAQVER CEEEECCCCCCCHHHHHHHHHHHHCCCCHHCCHHHHHHHEEECCCCHHHHHHCCHHHHHH EIARLLQARDAVAAELGGLQRDLPEDAPAELSALLDVHLMLLHDEALTGATSQWVHERHY HHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC NAEWALSAQLEVLARHFDDMENDYLRERKADLEQVVERLLRVLMHDSSAVPPSIGVNPRD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FAGEDPLVLVANDIAPADMLQFKRSVFTGFVTDVGGKTSHTAIVARSLDIPAVVGAREAS CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCHHHH RIIRQDDWVVIDGDAGVVIVDPSSIVLEEYRFRQRQSELERVRLTRLRHTPAVTLDGERV HHHCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEE ELFANIELPGDAAAALEAGAVGVGLFRSEFLFMNRTDDLPGEDEQYQAYCAVVDAMKGLP EEEEEEECCCCHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC VTIRTVDIGADKPLDRMSAHELRHEHALNPALGLRAIRWSLSEPSMFRQQLRAILRASAH EEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC GQVRLLVPMLAHESEIRGTFDALARAKQQLTESGRAFGDVQVGAMIEVPAAALMIDRFLD CCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECEEEECHHHHHHHHHHHH AFDFVSLGTNDLIQYTLAIDRADEAVAHLYDPWHPAVLELVARTIRAARARGRAVSVCGE HHHHHHCCCHHHEEEHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH MAGDPSFTSVLLAMGLRSFSMHPSQIAAIKQQILRTDTRRLSDLLLGARSDAPTFTPLRN HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC GGGVAATPPRP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1653223 [H]