Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265515
Identifier: 124265515
GI number: 124265515
Start: 347767
End: 348297
Strand: Direct
Name: 124265515
Synonym: Mpe_A0322
Alternate gene names: NA
Gene position: 347767-348297 (Clockwise)
Preceding gene: 124265512
Following gene: 124265516
Centisome position: 8.6
GC content: 68.93
Gene sequence:
>531_bases ATGTCGTTGCGACCCGTCGTGTGTGCCTGGGTGGCGGGTCTCTCCGCTCTGGCGGCGGCCTGCGCGCCTTCGCTCGACTG GCGCGAGGTGCGACCGGACGAGGCCGGCTTGATGATGTTGATGCCTTGCAAGCCGGAGCAGCGGACCCGTCAGCTGGTCC TGGTTGGGCGCCCGGTCCAGATGCGGGTTCTGGGCTGCACCGCGGATGGAACGACCTGGGGCCTGAGCACCGCCGACCTG GCTGACCCGGCGCTCGTCGGCCCGGCGCTGGCGGAGTTGCGTGCGGCGCGACGGCTCAATCTCGACGGAACCGAGACGGC GGTGAAGGCGGCACAGGTCGGTGGCATGACGCCGCAGGCGCAGGCGGTTCGGTTCAGCCTTGCCGGCAAGCTCCCGGACG GCACGTCGCTGACCGATCAATCGCTGCTGTTCGCGCACGGCACGCGTGTGTTCCATGCCGCCGCTTTGGGCGGGAAGCCG TCGGCGCAGGAGCTCGAGACTTTCTTCGACGGTCTGAAACTTCAGAAGTGA
Upstream 100 bases:
>100_bases ACAGGTCCAGCACGCGCAGGCCGGCCAGTGAGAGAGGGGTGGGAGCGAGGGCCATGCCGCGATTCTGATGCGGTGCGCGC GGCATCCGGATAATGCGGCG
Downstream 100 bases:
>100_bases CAGGGTCCGAAAGGTCCGATCCGGGGCAGGGTGGCTGCGCACGATGTACAAACGCGGCTTGCCAGACTCTGTCCGATGCT GTCGTGCCGGTCCGGGCCTG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSLRPVVCAWVAGLSALAAACAPSLDWREVRPDEAGLMMLMPCKPEQRTRQLVLVGRPVQMRVLGCTADGTTWGLSTADL ADPALVGPALAELRAARRLNLDGTETAVKAAQVGGMTPQAQAVRFSLAGKLPDGTSLTDQSLLFAHGTRVFHAAALGGKP SAQELETFFDGLKLQK
Sequences:
>Translated_176_residues MSLRPVVCAWVAGLSALAAACAPSLDWREVRPDEAGLMMLMPCKPEQRTRQLVLVGRPVQMRVLGCTADGTTWGLSTADL ADPALVGPALAELRAARRLNLDGTETAVKAAQVGGMTPQAQAVRFSLAGKLPDGTSLTDQSLLFAHGTRVFHAAALGGKP SAQELETFFDGLKLQK >Mature_175_residues SLRPVVCAWVAGLSALAAACAPSLDWREVRPDEAGLMMLMPCKPEQRTRQLVLVGRPVQMRVLGCTADGTTWGLSTADLA DPALVGPALAELRAARRLNLDGTETAVKAAQVGGMTPQAQAVRFSLAGKLPDGTSLTDQSLLFAHGTRVFHAAALGGKPS AQELETFFDGLKLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18565; Mature: 18434
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRPVVCAWVAGLSALAAACAPSLDWREVRPDEAGLMMLMPCKPEQRTRQLVLVGRPVQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCEE MRVLGCTADGTTWGLSTADLADPALVGPALAELRAARRLNLDGTETAVKAAQVGGMTPQA EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH QAVRFSLAGKLPDGTSLTDQSLLFAHGTRVFHAAALGGKPSAQELETFFDGLKLQK HHEEEEECCCCCCCCCCCCCHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SLRPVVCAWVAGLSALAAACAPSLDWREVRPDEAGLMMLMPCKPEQRTRQLVLVGRPVQ CCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCEE MRVLGCTADGTTWGLSTADLADPALVGPALAELRAARRLNLDGTETAVKAAQVGGMTPQA EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCH QAVRFSLAGKLPDGTSLTDQSLLFAHGTRVFHAAALGGKPSAQELETFFDGLKLQK HHEEEEECCCCCCCCCCCCCHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA