Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265512
Identifier: 124265512
GI number: 124265512
Start: 344534
End: 345220
Strand: Direct
Name: 124265512
Synonym: Mpe_A0319
Alternate gene names: NA
Gene position: 344534-345220 (Clockwise)
Preceding gene: 124265510
Following gene: 124265515
Centisome position: 8.52
GC content: 65.07
Gene sequence:
>687_bases ATGGATCGTCGAGAGTTTACGGGGCAGCTCGTCGCCGGCATGGCGTTGTGGATCTGCGCCGCGCAGGCGCGGGCGCTATC CCTCAGTGACGCCGATGCCAGCGCCGGCTTGAAGGCGGCGCTGGAGCGCGGGGCCGAAGTGGCCGTGAGCCTGCTCGGCA AGACCGATGGATTCCTCGGCAATCCGAAAGTTCGCATCCCGCTGCCGTCGGGCCTGGACAGCGCCGCCAAACTGATGAAG AGCCTGGGCCAGGGCAAGAAGGTCGACGAACTGGTGACCGCCATGAACCGCGCCGCGGAGGCCGCCGTGCCGGAGTCCAA GCAACTGCTCAGCAATGCCGTCAAGCAGATGTCGGTCGACGACGCAAAGAAGATACTCACCGGCGGCGACACCTCGGTGA CGAACTTCTTCGCCGAGAAGACGCGCATGCCGCTCGGTGAGAAGTTCCTGCCGATCGTCACGCGGCAGACCGAGAAGGTC GACCTCGCCAACAAGTACAACGCGGTGGCCGCCAAGGCGTCGGGCTTCGGTCTGGTGAAGAAGGCGGACGCTAACGTGCA GCAGTACGTGACCGGCAAGGCGCTCGACGGCCTCTACCTGATGATCGGCGAGGAGGAGAAGAAGATCAGGCAGGACCCGG TGGGCACCGGGAGCGCAATCCTGAAGAAGGTGTTCGGCGCGCTGTAG
Upstream 100 bases:
>100_bases ACAGCCTGCTTGCCGGTCAGTGCCAGCGTGGCGGCGATGCCGATTGCCAGGACGGCGGCCGCGGCCGCAACATAGCGCAT CAATTTCATGGAGGTGTCCG
Downstream 100 bases:
>100_bases GCGCGCACCCTCAGTACTGCTTCGAGAGCTCGAACACCAGCGCGGACGGCAGCGACTGGTGCAGACCGTCCCGGCCCACC CGCGCGTGGTTCATGCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MDRREFTGQLVAGMALWICAAQARALSLSDADASAGLKAALERGAEVAVSLLGKTDGFLGNPKVRIPLPSGLDSAAKLMK SLGQGKKVDELVTAMNRAAEAAVPESKQLLSNAVKQMSVDDAKKILTGGDTSVTNFFAEKTRMPLGEKFLPIVTRQTEKV DLANKYNAVAAKASGFGLVKKADANVQQYVTGKALDGLYLMIGEEEKKIRQDPVGTGSAILKKVFGAL
Sequences:
>Translated_228_residues MDRREFTGQLVAGMALWICAAQARALSLSDADASAGLKAALERGAEVAVSLLGKTDGFLGNPKVRIPLPSGLDSAAKLMK SLGQGKKVDELVTAMNRAAEAAVPESKQLLSNAVKQMSVDDAKKILTGGDTSVTNFFAEKTRMPLGEKFLPIVTRQTEKV DLANKYNAVAAKASGFGLVKKADANVQQYVTGKALDGLYLMIGEEEKKIRQDPVGTGSAILKKVFGAL >Mature_228_residues MDRREFTGQLVAGMALWICAAQARALSLSDADASAGLKAALERGAEVAVSLLGKTDGFLGNPKVRIPLPSGLDSAAKLMK SLGQGKKVDELVTAMNRAAEAAVPESKQLLSNAVKQMSVDDAKKILTGGDTSVTNFFAEKTRMPLGEKFLPIVTRQTEKV DLANKYNAVAAKASGFGLVKKADANVQQYVTGKALDGLYLMIGEEEKKIRQDPVGTGSAILKKVFGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24083; Mature: 24083
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRREFTGQLVAGMALWICAAQARALSLSDADASAGLKAALERGAEVAVSLLGKTDGFLG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC NPKVRIPLPSGLDSAAKLMKSLGQGKKVDELVTAMNRAAEAAVPESKQLLSNAVKQMSVD CCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHH DAKKILTGGDTSVTNFFAEKTRMPLGEKFLPIVTRQTEKVDLANKYNAVAAKASGFGLVK HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEE KADANVQQYVTGKALDGLYLMIGEEEKKIRQDPVGTGSAILKKVFGAL CCCCCHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDRREFTGQLVAGMALWICAAQARALSLSDADASAGLKAALERGAEVAVSLLGKTDGFLG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC NPKVRIPLPSGLDSAAKLMKSLGQGKKVDELVTAMNRAAEAAVPESKQLLSNAVKQMSVD CCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHH DAKKILTGGDTSVTNFFAEKTRMPLGEKFLPIVTRQTEKVDLANKYNAVAAKASGFGLVK HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEE KADANVQQYVTGKALDGLYLMIGEEEKKIRQDPVGTGSAILKKVFGAL CCCCCHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA