Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265510
Identifier: 124265510
GI number: 124265510
Start: 342879
End: 344003
Strand: Direct
Name: 124265510
Synonym: Mpe_A0317
Alternate gene names: NA
Gene position: 342879-344003 (Clockwise)
Preceding gene: 124265509
Following gene: 124265512
Centisome position: 8.48
GC content: 72.71
Gene sequence:
>1125_bases ATGATCTGGCCGCCGTTGCGGGCCTGGCTGCCGGCGCGCCTCCCGGTCGGGCCGACCGAGCGAGCGCGGGCCGCGCTGGG CGCGGCGCTGGGGCTGCTGCTGACCGGCCTGCTGAGCCGCTGGGTCGCTGCGCAATGGCCCGGCGCCGACGTGCCCTGGC TGGTGGCACCCCTCGGCGCCAGCGCGGTGCTGGTGTTCGCGGTACCGGCCAGCCCGCTTGCCCAGCCTTGGTCAGTGGTG GGCGGCAACACCGCCTCGGCGCTGATCGGCATCGCCTGCGCGCATCTGATCCCGGACCCGGCGTGGGCCGGCGCAATCGC GGTGGGGCTGGCGATCGCCGCGATGTTCGCGCTGCGCTGTCTGCACCCGCCGGGCGGGGCGATGGCGCTGCTGACGGCGT TGGCCGGCATCGGCTCGTTCGGTTTTGCGTGGTTCCCGACCTGCGTCAATTCCGTGCTGCTGGTGCTGGCCGGCGCCGCT TACAACAGCGCGACGCGACGCCCCTATCCGCACGCCCAGCTGGCGACGCCGCCCGGGCCGGGCGGCGACGAGACCCACCG CTTCAGCGACGCCGACCTCGACGCGGTGCTGGAGCGCTATGGCCAGGTGATCGATGTGAGCCGCGACGACCTGGTCGCGC TGCTGCATGCGGCCGAGGGCGAGGCCTACCGTCGGCGTTTCGGTGCGACGCTGTGCGCCGATATCATGACGCGCGAGGTC GTGACTGTGTCATTCGGCACCGAGCTGCAGGACGCCTGGGCGCTGCTGCGCGAGCACCGCATCAAGGCGCTGCCGGTGGT TGACCGGGCGCGGCGTGTGGTCGGCATCGTGACGCTGGCGGATTTCCTGCGCCATGCCGACCTGGATGTCCACGAGGGCT GGTCGGCGCGTCTGCGCAGCTTCATCCGCCGTACGCCGGCCACGCACAGCGACAAGCCGGAGGTGGTGGGGCAGATCATG ACGCGCCAGGTGCGCGTCGCCAGCGAGGACCGCCCGGTGGCCGAGCTGGTGCCACTGTTCGCGCAGGGAGGGCACCACCA CATTCCGATCGTCGGGCCGGAGGCGCGACTCGTCGGCATGCTGACGCAGTCCGACGTGGTGTCGGCCCTGTCGCGTGTGG GCTGA
Upstream 100 bases:
>100_bases CACGCCGCCGTGGGCGCCATGGTGCGCTCGAGCTACCACGCCGACCAGCAGGCCCACGCCGCGGGTGTGGGTGTCGTCGC AGGCTGAGACGCCGCGGCCG
Downstream 100 bases:
>100_bases AGGCGCCGCGGCGCCGACTCAGGCCTCGGCGAGCAGCTTGTCGAGCAGGCGGTGCAGTTCGGCGAAATCGGGCTCGCCGA CGTAGCGCTTGACGATCTCG
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; HPP Family Protein; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Family Protein+B; HPP Domain-Containing Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIWPPLRAWLPARLPVGPTERARAALGAALGLLLTGLLSRWVAAQWPGADVPWLVAPLGASAVLVFAVPASPLAQPWSVV GGNTASALIGIACAHLIPDPAWAGAIAVGLAIAAMFALRCLHPPGGAMALLTALAGIGSFGFAWFPTCVNSVLLVLAGAA YNSATRRPYPHAQLATPPGPGGDETHRFSDADLDAVLERYGQVIDVSRDDLVALLHAAEGEAYRRRFGATLCADIMTREV VTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLADFLRHADLDVHEGWSARLRSFIRRTPATHSDKPEVVGQIM TRQVRVASEDRPVAELVPLFAQGGHHHIPIVGPEARLVGMLTQSDVVSALSRVG
Sequences:
>Translated_374_residues MIWPPLRAWLPARLPVGPTERARAALGAALGLLLTGLLSRWVAAQWPGADVPWLVAPLGASAVLVFAVPASPLAQPWSVV GGNTASALIGIACAHLIPDPAWAGAIAVGLAIAAMFALRCLHPPGGAMALLTALAGIGSFGFAWFPTCVNSVLLVLAGAA YNSATRRPYPHAQLATPPGPGGDETHRFSDADLDAVLERYGQVIDVSRDDLVALLHAAEGEAYRRRFGATLCADIMTREV VTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLADFLRHADLDVHEGWSARLRSFIRRTPATHSDKPEVVGQIM TRQVRVASEDRPVAELVPLFAQGGHHHIPIVGPEARLVGMLTQSDVVSALSRVG >Mature_374_residues MIWPPLRAWLPARLPVGPTERARAALGAALGLLLTGLLSRWVAAQWPGADVPWLVAPLGASAVLVFAVPASPLAQPWSVV GGNTASALIGIACAHLIPDPAWAGAIAVGLAIAAMFALRCLHPPGGAMALLTALAGIGSFGFAWFPTCVNSVLLVLAGAA YNSATRRPYPHAQLATPPGPGGDETHRFSDADLDAVLERYGQVIDVSRDDLVALLHAAEGEAYRRRFGATLCADIMTREV VTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLADFLRHADLDVHEGWSARLRSFIRRTPATHSDKPEVVGQIM TRQVRVASEDRPVAELVPLFAQGGHHHIPIVGPEARLVGMLTQSDVVSALSRVG
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39738; Mature: 39738
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWPPLRAWLPARLPVGPTERARAALGAALGLLLTGLLSRWVAAQWPGADVPWLVAPLGA CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC SAVLVFAVPASPLAQPWSVVGGNTASALIGIACAHLIPDPAWAGAIAVGLAIAAMFALRC CEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LHPPGGAMALLTALAGIGSFGFAWFPTCVNSVLLVLAGAAYNSATRRPYPHAQLATPPGP CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC GGDETHRFSDADLDAVLERYGQVIDVSRDDLVALLHAAEGEAYRRRFGATLCADIMTREV CCCCCCCCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLADFLRHADLDVHEGWSARLRS EEEECCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FIRRTPATHSDKPEVVGQIMTRQVRVASEDRPVAELVPLFAQGGHHHIPIVGPEARLVGM HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCHHHHHH LTQSDVVSALSRVG HHHHHHHHHHHHCC >Mature Secondary Structure MIWPPLRAWLPARLPVGPTERARAALGAALGLLLTGLLSRWVAAQWPGADVPWLVAPLGA CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC SAVLVFAVPASPLAQPWSVVGGNTASALIGIACAHLIPDPAWAGAIAVGLAIAAMFALRC CEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LHPPGGAMALLTALAGIGSFGFAWFPTCVNSVLLVLAGAAYNSATRRPYPHAQLATPPGP CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC GGDETHRFSDADLDAVLERYGQVIDVSRDDLVALLHAAEGEAYRRRFGATLCADIMTREV CCCCCCCCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLADFLRHADLDVHEGWSARLRS EEEECCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FIRRTPATHSDKPEVVGQIMTRQVRVASEDRPVAELVPLFAQGGHHHIPIVGPEARLVGM HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCHHHHHH LTQSDVVSALSRVG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA