Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265503
Identifier: 124265503
GI number: 124265503
Start: 335715
End: 336341
Strand: Direct
Name: 124265503
Synonym: Mpe_A0310
Alternate gene names: NA
Gene position: 335715-336341 (Clockwise)
Preceding gene: 124265502
Following gene: 124265504
Centisome position: 8.3
GC content: 71.93
Gene sequence:
>627_bases ATGAACGTCCAGACGCAGCGACTGACGCTTGGCGGTCCCGCCGGCGACATCGAGTGCGCGCTCGACGCGCCGGCCGGCCC GGCGCGGGCGGTGCTGGTGATCTGCCACCCGCATCCGCTGCATGGCGGCACGATGGACAACAAGGTAGTGCAGACGGTCG CGCGTGCCGGCCTGCAACTCGGCGCGCGCAGCGTGCGCTTCAACTTCCGGGGCGTCGGCGCGTCGGCCGGCAGTTGGGAC GAAGGCCGCGGCGAGCTCGACGACGCGCTGGCGGTCATCGCGGCGCAACGTGACCCGGCCTTGCCGCTGTGGATGGCCGG CTTCTCGTTCGGCGGCTTCGTGGCCGCCAGTGCCGCGGCGCACCTGAGCGGCGACGCGCGGCCGCGGCGGCTGGCGTTGA TCGCCCCGTCGACGCAGAAGCAGCAGGTGCCCGCCATTCCCGAGGAACTCCAGGCCGACACGCTGGTGGTTCACGGCGAG ACCGATGACGTGGTGCCGTTGTCGGCCACCTTCGACTGGGCGCGCCCGCAGGGCCTGCCGGTCACGGTGATTCCCGGCGT CGGCCATTTCTTTCATGGGCAGCTCGCGCTGCTCAAGTCGCTGGTGGTGCGCGGCTGGTCCTCCTGA
Upstream 100 bases:
>100_bases CGAATCCCACCTGAAGCACGGCCAGGTCGTCGAGCGCCTGCTGCTGCCGCCCGATGTGGGTCGCTGACGACGTGCCGGCA GCCGGTTGTCCGTTCTCGCG
Downstream 100 bases:
>100_bases CCGGCGCGCCGCCCGCTCCCGTTTCCCGTTGCAGAGACCCCGATGAAAAGACTGTTCGTTCTTCTGTTCGCCGTCGCCAC CGCTCTCACGGGCGTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNVQTQRLTLGGPAGDIECALDAPAGPARAVLVICHPHPLHGGTMDNKVVQTVARAGLQLGARSVRFNFRGVGASAGSWD EGRGELDDALAVIAAQRDPALPLWMAGFSFGGFVAASAAAHLSGDARPRRLALIAPSTQKQQVPAIPEELQADTLVVHGE TDDVVPLSATFDWARPQGLPVTVIPGVGHFFHGQLALLKSLVVRGWSS
Sequences:
>Translated_208_residues MNVQTQRLTLGGPAGDIECALDAPAGPARAVLVICHPHPLHGGTMDNKVVQTVARAGLQLGARSVRFNFRGVGASAGSWD EGRGELDDALAVIAAQRDPALPLWMAGFSFGGFVAASAAAHLSGDARPRRLALIAPSTQKQQVPAIPEELQADTLVVHGE TDDVVPLSATFDWARPQGLPVTVIPGVGHFFHGQLALLKSLVVRGWSS >Mature_208_residues MNVQTQRLTLGGPAGDIECALDAPAGPARAVLVICHPHPLHGGTMDNKVVQTVARAGLQLGARSVRFNFRGVGASAGSWD EGRGELDDALAVIAAQRDPALPLWMAGFSFGGFVAASAAAHLSGDARPRRLALIAPSTQKQQVPAIPEELQADTLVVHGE TDDVVPLSATFDWARPQGLPVTVIPGVGHFFHGQLALLKSLVVRGWSS
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 21743; Mature: 21743
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVQTQRLTLGGPAGDIECALDAPAGPARAVLVICHPHPLHGGTMDNKVVQTVARAGLQL CCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC GARSVRFNFRGVGASAGSWDEGRGELDDALAVIAAQRDPALPLWMAGFSFGGFVAASAAA CCEEEEEEEEECCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHH HLSGDARPRRLALIAPSTQKQQVPAIPEELQADTLVVHGETDDVVPLSATFDWARPQGLP HCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCEEEEECEECCCCCCCCC VTVIPGVGHFFHGQLALLKSLVVRGWSS EEEECCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNVQTQRLTLGGPAGDIECALDAPAGPARAVLVICHPHPLHGGTMDNKVVQTVARAGLQL CCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC GARSVRFNFRGVGASAGSWDEGRGELDDALAVIAAQRDPALPLWMAGFSFGGFVAASAAA CCEEEEEEEEECCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHH HLSGDARPRRLALIAPSTQKQQVPAIPEELQADTLVVHGETDDVVPLSATFDWARPQGLP HCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCEEEEECEECCCCCCCCC VTVIPGVGHFFHGQLALLKSLVVRGWSS EEEECCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]