Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265491
Identifier: 124265491
GI number: 124265491
Start: 322884
End: 323933
Strand: Direct
Name: 124265491
Synonym: Mpe_A0298
Alternate gene names: NA
Gene position: 322884-323933 (Clockwise)
Preceding gene: 124265490
Following gene: 124265492
Centisome position: 7.98
GC content: 68.29
Gene sequence:
>1050_bases ATGACTGTTGGGAAAGCTTGCGTGCGCGGACTGTCGCGCGCGCTGCGGGTGTCGATGCTGGTCGGCCTGGGCGCCGTGCT GTCCGCGTGCGGCGGGGGTGATCGCGTCAGCAACTTCTCGCCGCAGCGTCTGATCGTGTTCGGGGATTCATCCAGCGTCG TCGCCGGCGGCAACCTGACCGACGTCAATGGCGGCACGGTCACCGCAGCGGCCGGGGCGAAGTTCTCGGTGAATGCCCAG GCCGTGGACTCGACCGGGGCGGCCACCGGCGCGCTCGACTGCAACAGCTACCCGATCTGGGTGCAGGCCCTGGGCTTCCA TTACGGCATCGGCTTTGCCGAATGCAATACCTTCACGGAGACGACGCCGCGCGGCAAGATCTACGCGCAGGTCGGTGCGG CAGTGGCCGATCTGTCAGCGCAGGTGGCGCTGGCCCGCGCCGATGCGGGAGGCTTCCGGTCCACCGATCTGGCGACGGTG ATGATTGGCCAGCAGGACATCCTCGACGCCTACGCGCAGTACCCGACCAAGACCGGCGCGGAAGTGATCGCGCTCGCCGA GGCCGCGGGCGAAACCCTGGGGCGCAACATCAATGCGCTGGCGCAGGAGGGGGCCCGGGTGCTGGTGACGACACTGCCGT TCCAGGGCAGCACTCCCTTCGGCGTGGCCCAGGACCTCATCAGCGGCGAGCGTTCCACGCTGCTGACCGACATGACCAAG CGCTTCAACGCCGGCATGCGCGCCACGCTGCTCAACGACGGCCGGTTGATCGGTCTCGTGCAGGCCGACGCGCAGATCAA CCTGCTGGTCAACAACCCCAGCAACTACGGCTACGTCAGCGTCTCGGCTGCGGCCTGCAGCACGCCGACGGCGATCTCCT GCACCGCACCCACGGCCGGCACGACCACCGTGCCGTCCGTGCCCGGCACGCTGGTGACCGGCGCCACGGTATCCAATTAC CTGTGGGCCGACGATCGCCACCTGGGCGCCAACGGCCAGTCCATCATTGGCAGCCTCGCGATCGATCGGGCGGTGAACAA CCCGTTCTGA
Upstream 100 bases:
>100_bases GCCGGTCCCGCCTGGGAGGGCGTCCGGGACCGCCTGCAACGCGCGGCCGCGCCCTGAGCGCGCCGACCCTCACCCCCTGG CCTGTGGAGTTGGAGTGAGC
Downstream 100 bases:
>100_bases TCCGTCCATCCCGAGGCCGGTGGGGCCCGGTCGCCTGCCACGGCCGGGTTTCTCCGCTGGGGCCCGACATCGCCTGCACT TACAGTCTGCCGTCAAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTVGKACVRGLSRALRVSMLVGLGAVLSACGGGDRVSNFSPQRLIVFGDSSSVVAGGNLTDVNGGTVTAAAGAKFSVNAQ AVDSTGAATGALDCNSYPIWVQALGFHYGIGFAECNTFTETTPRGKIYAQVGAAVADLSAQVALARADAGGFRSTDLATV MIGQQDILDAYAQYPTKTGAEVIALAEAAGETLGRNINALAQEGARVLVTTLPFQGSTPFGVAQDLISGERSTLLTDMTK RFNAGMRATLLNDGRLIGLVQADAQINLLVNNPSNYGYVSVSAAACSTPTAISCTAPTAGTTTVPSVPGTLVTGATVSNY LWADDRHLGANGQSIIGSLAIDRAVNNPF
Sequences:
>Translated_349_residues MTVGKACVRGLSRALRVSMLVGLGAVLSACGGGDRVSNFSPQRLIVFGDSSSVVAGGNLTDVNGGTVTAAAGAKFSVNAQ AVDSTGAATGALDCNSYPIWVQALGFHYGIGFAECNTFTETTPRGKIYAQVGAAVADLSAQVALARADAGGFRSTDLATV MIGQQDILDAYAQYPTKTGAEVIALAEAAGETLGRNINALAQEGARVLVTTLPFQGSTPFGVAQDLISGERSTLLTDMTK RFNAGMRATLLNDGRLIGLVQADAQINLLVNNPSNYGYVSVSAAACSTPTAISCTAPTAGTTTVPSVPGTLVTGATVSNY LWADDRHLGANGQSIIGSLAIDRAVNNPF >Mature_348_residues TVGKACVRGLSRALRVSMLVGLGAVLSACGGGDRVSNFSPQRLIVFGDSSSVVAGGNLTDVNGGTVTAAAGAKFSVNAQA VDSTGAATGALDCNSYPIWVQALGFHYGIGFAECNTFTETTPRGKIYAQVGAAVADLSAQVALARADAGGFRSTDLATVM IGQQDILDAYAQYPTKTGAEVIALAEAAGETLGRNINALAQEGARVLVTTLPFQGSTPFGVAQDLISGERSTLLTDMTKR FNAGMRATLLNDGRLIGLVQADAQINLLVNNPSNYGYVSVSAAACSTPTAISCTAPTAGTTTVPSVPGTLVTGATVSNYL WADDRHLGANGQSIIGSLAIDRAVNNPF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35546; Mature: 35415
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGKACVRGLSRALRVSMLVGLGAVLSACGGGDRVSNFSPQRLIVFGDSSSVVAGGNLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCEE DVNGGTVTAAAGAKFSVNAQAVDSTGAATGALDCNSYPIWVQALGFHYGIGFAECNTFTE ECCCCEEEEECCCEEEECCEEECCCCCCCCEECCCCCCEEEEEEHHHHCCCHHHCCCCCC TTPRGKIYAQVGAAVADLSAQVALARADAGGFRSTDLATVMIGQQDILDAYAQYPTKTGA CCCCCEEEEEHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCC EVIALAEAAGETLGRNINALAQEGARVLVTTLPFQGSTPFGVAQDLISGERSTLLTDMTK CEEEEHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHH RFNAGMRATLLNDGRLIGLVQADAQINLLVNNPSNYGYVSVSAAACSTPTAISCTAPTAG HHCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCCEEEEEHHHCCCCCEEEECCCCCC TTTVPSVPGTLVTGATVSNYLWADDRHLGANGQSIIGSLAIDRAVNNPF CCCCCCCCCCEEECCCHHCEEECCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVGKACVRGLSRALRVSMLVGLGAVLSACGGGDRVSNFSPQRLIVFGDSSSVVAGGNLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCEE DVNGGTVTAAAGAKFSVNAQAVDSTGAATGALDCNSYPIWVQALGFHYGIGFAECNTFTE ECCCCEEEEECCCEEEECCEEECCCCCCCCEECCCCCCEEEEEEHHHHCCCHHHCCCCCC TTPRGKIYAQVGAAVADLSAQVALARADAGGFRSTDLATVMIGQQDILDAYAQYPTKTGA CCCCCEEEEEHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCC EVIALAEAAGETLGRNINALAQEGARVLVTTLPFQGSTPFGVAQDLISGERSTLLTDMTK CEEEEHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHH RFNAGMRATLLNDGRLIGLVQADAQINLLVNNPSNYGYVSVSAAACSTPTAISCTAPTAG HHCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCCEEEEEHHHCCCCCEEEECCCCCC TTTVPSVPGTLVTGATVSNYLWADDRHLGANGQSIIGSLAIDRAVNNPF CCCCCCCCCCEEECCCHHCEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA