Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265480
Identifier: 124265480
GI number: 124265480
Start: 311869
End: 312672
Strand: Direct
Name: 124265480
Synonym: Mpe_A0287
Alternate gene names: NA
Gene position: 311869-312672 (Clockwise)
Preceding gene: 124265479
Following gene: 124265481
Centisome position: 7.71
GC content: 67.41
Gene sequence:
>804_bases ATGTCGATGCCCTCCCTGCGCTCCGTGCTGCGTCACCCGGCCTACCGCACCGGACTGGGCGAAATGGCCGGGGTTTCGCT GGGCATCGCCGCCTGGGGATTGGTGACGGGCGTCGCGATGGTCAAGGGCGGTCTGTCGGTACCGCTCGCCCTGTTGATGA CCTTCACGGTGTTCGCCGGCAGCGCGCAGCTCGCCACCATCCCGCTGATCGCCCTGAGCGCGCCGGTCTGGGTGATCTGG GCCACGGCCTTCTGCGTCAACCTGCGTTTCGTGATCTTCAGCGCGCAGTGGCGCCCCTATTTCATGCGCTTTCCCTTGAA GCAGCGCCTGATGCTGGGCTACTTCTCGGGTGACCTCAACTATGTGCTGTTCATGCGGCGCTATGCGGTGCCTCCGACGG ACGGCGATGTGCCGGAGGGGCAGATCGAGTACTTCTGGGGATCTGTCAGCGCGAACTACCTCGCCTGGCAGATTCCCTCG GTGATCGGCATTCTGCTGGCGGACGTGGTGCCTACCCACTGGGGGCTTGGCTTCGCCGGTACGCTGGCCCTGCTCGGCCT GACCTATTCGCTGGTGTCGGACCGTGCCACGCTGCTGGCGGCGGTCGTGGCCGGGGCCGCAGCTGTCGCGGCCTTCGCGC TGCCGTTCAAGCTCTACATCGTCGTGGCGATCGCCGCGGCCGTGTGCATCGGGCTGATGATCGATGGCGGTGACGACGCC GGCCGTCGGCTTCGTGCCTGGCTGGATCGCACCGGCGCGCGCCGTCTCGACGCCCACGCGCGCGACAAGGAGTGCGTCGC TTGA
Upstream 100 bases:
>100_bases AAGTCACATACGTCCTGAAGCGCCAGCGGCGTTTTGCGTCACGCAAGTGGTGGCCGCTGCAGGGCGGTGAGACCGCCCGA CCGGTGGGACAATCGAGCGC
Downstream 100 bases:
>100_bases GCACGGGTGAGTTCCTGCTCACGATTGCCGGGCTCACGGTCATCACCGTGGTCACCCGCTCGTTCTTCTTCCTGTCCGAC CGCGAGCTGGCGCTGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like; Branched-Chain Amino Acid Permease; Branched Chain Amino Acid Efflux Pump LivE; Inner Membrane Protein; AzlC-Like Protein; Inner Membrane Protein YgaZ; AzlC Family; Azaleucine Resistance Protein AzlC; Azlc Family Protein; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAGSAQLATIPLIALSAPVWVIW ATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLNYVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPS VIGILLADVVPTHWGLGFAGTLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA GRRLRAWLDRTGARRLDAHARDKECVA
Sequences:
>Translated_267_residues MSMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAGSAQLATIPLIALSAPVWVIW ATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLNYVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPS VIGILLADVVPTHWGLGFAGTLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA GRRLRAWLDRTGARRLDAHARDKECVA >Mature_266_residues SMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAGSAQLATIPLIALSAPVWVIWA TAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLNYVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPSV IGILLADVVPTHWGLGFAGTLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDAG RRLRAWLDRTGARRLDAHARDKECVA
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28698; Mature: 28567
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAG CCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SAQLATIPLIALSAPVWVIWATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLN CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHCCHHHHHHHHHHCCCHH YVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPSVIGILLADVVPTHWGLGFAG HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH TLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH GRRLRAWLDRTGARRLDAHARDKECVA HHHHHHHHHHCCCHHHCCCCCCCCCCC >Mature Secondary Structure SMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAG CCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SAQLATIPLIALSAPVWVIWATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLN CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHCCHHHHHHHHHHCCCHH YVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPSVIGILLADVVPTHWGLGFAG HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH TLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH GRRLRAWLDRTGARRLDAHARDKECVA HHHHHHHHHHCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA