Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265479
Identifier: 124265479
GI number: 124265479
Start: 311412
End: 311786
Strand: Direct
Name: 124265479
Synonym: Mpe_A0286
Alternate gene names: NA
Gene position: 311412-311786 (Clockwise)
Preceding gene: 124265478
Following gene: 124265480
Centisome position: 7.7
GC content: 66.67
Gene sequence:
>375_bases ATGTCGCCCCTCCGTATCCTTCCCCTGATCGCCCTGGCGCTGCTCGCCGGTTGCGACCTGCTCGGCACCGAGGCCGCCGA GAAGACGGCGGCTCTGAAAGAAGCCGACGGCAAGGCCATTGGCAGCGCCTGTCGGCATGCCGGGCGGGCCATCGAGGATT GCTACGCGCTCAATGCCAAGGCGCAGCGCGCTGCCGTCTTTGCCGGTTGGCGCGAGATGGACGAGTACATGCGCGAGAAC AAGCTCGACGCTGTGGCGCCGCAGATACAGCGGCCGGGCAGCAAGCCGGTCGAATCGGAGGTCGCGAAGACCGATGCAGC GGCGCCGATCCCGGCTGAACCCAAGGCAGACAAGCGCAAGTCACATACGTCCTGA
Upstream 100 bases:
>100_bases GCCGACGTGAGGGGGCCGCTTCCGCAGGGCCCTTTTTGTCGGCGGGCTCAAGTGACGGGCGGCGTGACCGATAAGCCTGC GAAGCCTGTCCGCATCCATC
Downstream 100 bases:
>100_bases AGCGCCAGCGGCGTTTTGCGTCACGCAAGTGGTGGCCGCTGCAGGGCGGTGAGACCGCCCGACCGGTGGGACAATCGAGC GCATGTCGATGCCCTCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSPLRILPLIALALLAGCDLLGTEAAEKTAALKEADGKAIGSACRHAGRAIEDCYALNAKAQRAAVFAGWREMDEYMREN KLDAVAPQIQRPGSKPVESEVAKTDAAAPIPAEPKADKRKSHTS
Sequences:
>Translated_124_residues MSPLRILPLIALALLAGCDLLGTEAAEKTAALKEADGKAIGSACRHAGRAIEDCYALNAKAQRAAVFAGWREMDEYMREN KLDAVAPQIQRPGSKPVESEVAKTDAAAPIPAEPKADKRKSHTS >Mature_123_residues SPLRILPLIALALLAGCDLLGTEAAEKTAALKEADGKAIGSACRHAGRAIEDCYALNAKAQRAAVFAGWREMDEYMRENK LDAVAPQIQRPGSKPVESEVAKTDAAAPIPAEPKADKRKSHTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13167; Mature: 13036
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLRILPLIALALLAGCDLLGTEAAEKTAALKEADGKAIGSACRHAGRAIEDCYALNAK CCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCH AQRAAVFAGWREMDEYMRENKLDAVAPQIQRPGSKPVESEVAKTDAAAPIPAEPKADKRK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC SHTS CCCC >Mature Secondary Structure SPLRILPLIALALLAGCDLLGTEAAEKTAALKEADGKAIGSACRHAGRAIEDCYALNAK CCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCH AQRAAVFAGWREMDEYMRENKLDAVAPQIQRPGSKPVESEVAKTDAAAPIPAEPKADKRK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC SHTS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA