Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265480

Identifier: 124265480

GI number: 124265480

Start: 311869

End: 312672

Strand: Direct

Name: 124265480

Synonym: Mpe_A0287

Alternate gene names: NA

Gene position: 311869-312672 (Clockwise)

Preceding gene: 124265479

Following gene: 124265481

Centisome position: 7.71

GC content: 67.41

Gene sequence:

>804_bases
ATGTCGATGCCCTCCCTGCGCTCCGTGCTGCGTCACCCGGCCTACCGCACCGGACTGGGCGAAATGGCCGGGGTTTCGCT
GGGCATCGCCGCCTGGGGATTGGTGACGGGCGTCGCGATGGTCAAGGGCGGTCTGTCGGTACCGCTCGCCCTGTTGATGA
CCTTCACGGTGTTCGCCGGCAGCGCGCAGCTCGCCACCATCCCGCTGATCGCCCTGAGCGCGCCGGTCTGGGTGATCTGG
GCCACGGCCTTCTGCGTCAACCTGCGTTTCGTGATCTTCAGCGCGCAGTGGCGCCCCTATTTCATGCGCTTTCCCTTGAA
GCAGCGCCTGATGCTGGGCTACTTCTCGGGTGACCTCAACTATGTGCTGTTCATGCGGCGCTATGCGGTGCCTCCGACGG
ACGGCGATGTGCCGGAGGGGCAGATCGAGTACTTCTGGGGATCTGTCAGCGCGAACTACCTCGCCTGGCAGATTCCCTCG
GTGATCGGCATTCTGCTGGCGGACGTGGTGCCTACCCACTGGGGGCTTGGCTTCGCCGGTACGCTGGCCCTGCTCGGCCT
GACCTATTCGCTGGTGTCGGACCGTGCCACGCTGCTGGCGGCGGTCGTGGCCGGGGCCGCAGCTGTCGCGGCCTTCGCGC
TGCCGTTCAAGCTCTACATCGTCGTGGCGATCGCCGCGGCCGTGTGCATCGGGCTGATGATCGATGGCGGTGACGACGCC
GGCCGTCGGCTTCGTGCCTGGCTGGATCGCACCGGCGCGCGCCGTCTCGACGCCCACGCGCGCGACAAGGAGTGCGTCGC
TTGA

Upstream 100 bases:

>100_bases
AAGTCACATACGTCCTGAAGCGCCAGCGGCGTTTTGCGTCACGCAAGTGGTGGCCGCTGCAGGGCGGTGAGACCGCCCGA
CCGGTGGGACAATCGAGCGC

Downstream 100 bases:

>100_bases
GCACGGGTGAGTTCCTGCTCACGATTGCCGGGCTCACGGTCATCACCGTGGTCACCCGCTCGTTCTTCTTCCTGTCCGAC
CGCGAGCTGGCGCTGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like; Branched-Chain Amino Acid Permease; Branched Chain Amino Acid Efflux Pump LivE; Inner Membrane Protein; AzlC-Like Protein; Inner Membrane Protein YgaZ; AzlC Family; Azaleucine Resistance Protein AzlC; Azlc Family Protein; Branched Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAGSAQLATIPLIALSAPVWVIW
ATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLNYVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPS
VIGILLADVVPTHWGLGFAGTLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA
GRRLRAWLDRTGARRLDAHARDKECVA

Sequences:

>Translated_267_residues
MSMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAGSAQLATIPLIALSAPVWVIW
ATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLNYVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPS
VIGILLADVVPTHWGLGFAGTLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA
GRRLRAWLDRTGARRLDAHARDKECVA
>Mature_266_residues
SMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAGSAQLATIPLIALSAPVWVIWA
TAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLNYVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPSV
IGILLADVVPTHWGLGFAGTLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDAG
RRLRAWLDRTGARRLDAHARDKECVA

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28698; Mature: 28567

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
SMPSLRSVLRHPAYRTGLGEMAGVSLGIAAWGLVTGVAMVKGGLSVPLALLMTFTVFAG
CCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SAQLATIPLIALSAPVWVIWATAFCVNLRFVIFSAQWRPYFMRFPLKQRLMLGYFSGDLN
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHHHCCHHHHHHHHHHCCCHH
YVLFMRRYAVPPTDGDVPEGQIEYFWGSVSANYLAWQIPSVIGILLADVVPTHWGLGFAG
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TLALLGLTYSLVSDRATLLAAVVAGAAAVAAFALPFKLYIVVAIAAAVCIGLMIDGGDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH
GRRLRAWLDRTGARRLDAHARDKECVA
HHHHHHHHHHCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA