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The map label for this gene is ycaD [C]

Identifier: 124265421

GI number: 124265421

Start: 244812

End: 245993

Strand: Direct

Name: ycaD [C]

Synonym: Mpe_A0228

Alternate gene names: 124265421

Gene position: 244812-245993 (Clockwise)

Preceding gene: 124265420

Following gene: 124265431

Centisome position: 6.05

GC content: 73.18

Gene sequence:

>1182_bases
ATGAGCTCCGATGCTCCCGTGGGCCGCGGGCTCTGGCGCATCGGGGCGGGCACGACGCTGGTGGTGCTGGCCTTCAGCGT
TGTCAACCCGGTGCTCGCCGTGACGCTTCAGCGCCGGGGTGTGAACGCTGGCGCGATCGGCCTGTTCGCGATGCTGCCCT
TCCTGACCGTGGCGACGATGATCCCGGTGATGCCGCGCGTGTTCGCGCGCCTCGGCGTGATCCGCGCCTACCGGGGCGGC
CTGGTGCTGGGCGTGCTGTCACTGGCGGGCTATGCGCTGACCGACAGCTATCTCGCTTGGTGTTGCTGGTCGGTGCTCGG
CGCATTGGGCGCGGCGGCCGAATGGAACGGCACCGAGGCGCTGATCGCCTTCAACGCGCCGCCGGCCCGGCGCGGCCGCT
TCACCGGGATGTACCAGACCGCGCTGGGCGCAGCTCTCGCGGTCGGTCCCTTGCTGCCCGGTGCGCTGCAATGGCTGTTG
CCCGCGGGGAAGCCTCTGCACACGGTGTGGCTGCTGTGGGGCGCCGCCGCCATCTACGCGCTGGCGCTGGGAGTCACGGC
CGGCCCCGCGGTCGGCCGTCTGCGGGCCTCGCACACCGGCGGCGGCCGCGACAGCCTGCGGGCCGCGCTGCGGGCGCGGC
CGGCACTGGTGTGGATTGCCTTCGCGGGTGGTGTGTTCGAGGCGGGCCTCGGTGGCATCACCGCGGCCTATGGGTCGCAG
CTCGGCATGTCGCTCGGCGTGGCGACGTCGATCGCCGGCGCGCTGGGCGTCGGCAGCTTCGTGCTGCAGTACCCGGCCGG
CTGGCTGGCGGACCACGCGCCGGTGCGGCGGGTGTTCGGCGTCGCCGGTGCCTTGTTGCTGCTGTCGGTGCTGGCCTTCG
GCCTGGCACCCCGCGTGGCCGCGTTGTTCTGGGTGGCGGCTTTCCTGTGGGGCGCGATCGGCGGCGCGCTCTACACCTTG
ACGATGGTCCGCGTGGCGCACGAGTTCACCGGTCGCTCCACCATCGCCGGCACCGCAGCGATGATCACCGGCTACACCGC
CGGCGGCGCCGTCGGGCCGGCGGTCAGCGGCCTGATGCTCGAACGCTGCGGTGTGCCGGGGCAGTCGCTTTGGCTGGCCG
CGCTCGCCGTCAGCGTGATCGCCGTGGCACTGCGCATGCGTGCCGGACCCGAGGGTCCCTGA

Upstream 100 bases:

>100_bases
GGCCTGATGGTCGCGTCGGTGATCGCGCCGTTCTGGTATTTCCGTCGCAAGGGTTGGCTGTGATGGCGGCGCGGGGTCTC
CGCGCTGCCGGTGAGACGCG

Downstream 100 bases:

>100_bases
ACCGGCGGTCCCTCAGCGGCTGGCACGGCGCTTGAGCCAGCGCATCAGCACGCCGATTGCTGGCAGCTTCTCGTACAGCT
CCTCGGCGGCATCCCAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSSDAPVGRGLWRIGAGTTLVVLAFSVVNPVLAVTLQRRGVNAGAIGLFAMLPFLTVATMIPVMPRVFARLGVIRAYRGG
LVLGVLSLAGYALTDSYLAWCCWSVLGALGAAAEWNGTEALIAFNAPPARRGRFTGMYQTALGAALAVGPLLPGALQWLL
PAGKPLHTVWLLWGAAAIYALALGVTAGPAVGRLRASHTGGGRDSLRAALRARPALVWIAFAGGVFEAGLGGITAAYGSQ
LGMSLGVATSIAGALGVGSFVLQYPAGWLADHAPVRRVFGVAGALLLLSVLAFGLAPRVAALFWVAAFLWGAIGGALYTL
TMVRVAHEFTGRSTIAGTAAMITGYTAGGAVGPAVSGLMLERCGVPGQSLWLAALAVSVIAVALRMRAGPEGP

Sequences:

>Translated_393_residues
MSSDAPVGRGLWRIGAGTTLVVLAFSVVNPVLAVTLQRRGVNAGAIGLFAMLPFLTVATMIPVMPRVFARLGVIRAYRGG
LVLGVLSLAGYALTDSYLAWCCWSVLGALGAAAEWNGTEALIAFNAPPARRGRFTGMYQTALGAALAVGPLLPGALQWLL
PAGKPLHTVWLLWGAAAIYALALGVTAGPAVGRLRASHTGGGRDSLRAALRARPALVWIAFAGGVFEAGLGGITAAYGSQ
LGMSLGVATSIAGALGVGSFVLQYPAGWLADHAPVRRVFGVAGALLLLSVLAFGLAPRVAALFWVAAFLWGAIGGALYTL
TMVRVAHEFTGRSTIAGTAAMITGYTAGGAVGPAVSGLMLERCGVPGQSLWLAALAVSVIAVALRMRAGPEGP
>Mature_392_residues
SSDAPVGRGLWRIGAGTTLVVLAFSVVNPVLAVTLQRRGVNAGAIGLFAMLPFLTVATMIPVMPRVFARLGVIRAYRGGL
VLGVLSLAGYALTDSYLAWCCWSVLGALGAAAEWNGTEALIAFNAPPARRGRFTGMYQTALGAALAVGPLLPGALQWLLP
AGKPLHTVWLLWGAAAIYALALGVTAGPAVGRLRASHTGGGRDSLRAALRARPALVWIAFAGGVFEAGLGGITAAYGSQL
GMSLGVATSIAGALGVGSFVLQYPAGWLADHAPVRRVFGVAGALLLLSVLAFGLAPRVAALFWVAAFLWGAIGGALYTLT
MVRVAHEFTGRSTIAGTAAMITGYTAGGAVGPAVSGLMLERCGVPGQSLWLAALAVSVIAVALRMRAGPEGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40007; Mature: 39876

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDAPVGRGLWRIGAGTTLVVLAFSVVNPVLAVTLQRRGVNAGAIGLFAMLPFLTVATM
CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IPVMPRVFARLGVIRAYRGGLVLGVLSLAGYALTDSYLAWCCWSVLGALGAAAEWNGTEA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
LIAFNAPPARRGRFTGMYQTALGAALAVGPLLPGALQWLLPAGKPLHTVWLLWGAAAIYA
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LALGVTAGPAVGRLRASHTGGGRDSLRAALRARPALVWIAFAGGVFEAGLGGITAAYGSQ
HHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHH
LGMSLGVATSIAGALGVGSFVLQYPAGWLADHAPVRRVFGVAGALLLLSVLAFGLAPRVA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFWVAAFLWGAIGGALYTLTMVRVAHEFTGRSTIAGTAAMITGYTAGGAVGPAVSGLML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
ERCGVPGQSLWLAALAVSVIAVALRMRAGPEGP
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSDAPVGRGLWRIGAGTTLVVLAFSVVNPVLAVTLQRRGVNAGAIGLFAMLPFLTVATM
CCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IPVMPRVFARLGVIRAYRGGLVLGVLSLAGYALTDSYLAWCCWSVLGALGAAAEWNGTEA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
LIAFNAPPARRGRFTGMYQTALGAALAVGPLLPGALQWLLPAGKPLHTVWLLWGAAAIYA
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LALGVTAGPAVGRLRASHTGGGRDSLRAALRARPALVWIAFAGGVFEAGLGGITAAYGSQ
HHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHH
LGMSLGVATSIAGALGVGSFVLQYPAGWLADHAPVRRVFGVAGALLLLSVLAFGLAPRVA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFWVAAFLWGAIGGALYTLTMVRVAHEFTGRSTIAGTAAMITGYTAGGAVGPAVSGLML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
ERCGVPGQSLWLAALAVSVIAVALRMRAGPEGP
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA