Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265431
Identifier: 124265431
GI number: 124265431
Start: 254189
End: 255151
Strand: Direct
Name: 124265431
Synonym: Mpe_A0238
Alternate gene names: NA
Gene position: 254189-255151 (Clockwise)
Preceding gene: 124265421
Following gene: 124265432
Centisome position: 6.29
GC content: 69.78
Gene sequence:
>963_bases ATGGCCGTGCGCGAGCTGGCGCCAGCGGCGATGAGCACACGCAGCGAAACCCGTCCCATCGCCCTGTCCATCGCGGCGGT CGAGCGCGACACGGGGCTGACGAAGGACACCTTGCGCATCTGGGAGCGCCGCTACGGCTTCCCCGTGCCGGACCGGAACG CGCTGGCCGAGCGCTTCTATCCGCTGGATCAGGTGGAGAAGCTGCGCGTCATCAAGCGCCTGCTCGACGCCGGGCACCGG CCTGGGCAGATCGTCGCGCAGCCGGTCGACGCCCTGCTGCGGCTCAGCGACAGCAGCGCCGCGGTCGCGGGACCGCGCGG CGATCCCGGCCAACCCGATCTTCGCGCCTACGTCGATCTGGTGCGCGCTCATGACGTGGACGGACTGCGCCGCCAATTGG CGCAGGCACAACTGCAGCTGGGGTTGGCGCGCTTCGTCATCGAGGTCATCTCGCCCTTGAATACGTTGATCGGCGACGCT TGGATGCGCGGTCATCTGGAAGTCTTCGAGGAGCACCTGTACACCGAATCGATGCACGTGCTGCTGCGTCAGGCCATCAG CACGGTGCCGGTGCCCGAGACGGGCAGCCGGCCCCGCGTGTTGCTGACCACCTTCCCGCACGAGCCGCACGGCCTGGGGC TGCTGATGGCCGAACCGCTGTTCCTGCTGGAAGGTTGCCGCTGCCTGAGCCTGGGGGTGCAGACGCCGATCTGGGACATC GTGCTGGCCGCCAAGTCGCAGCGCGCCGACATCGTGGCGCTGAGCTTCAGCTCGATACTCACACCGACGGCGGTCACGAC CGGTCTCGCGGAGTTGCGGGAGAAGTTGCCGCCGTCGATCGAGATCTGGGCCGGCGGCAGTGCGCCGGTGCTGCAGCGCC GGCCGGTGGCGGGTGTGACGGCGCTGGCCGCGCTGGGTGCGATCGCCGGGGAAACGCGGCGCTGGCGCGCGCAGCACGGT TGA
Upstream 100 bases:
>100_bases TTGTCCTGGTCAAACGCTGGAACTGATCTATATTACGAGCGCCCATGCCCCCGTCAAATGCTGGTCGACCCGCAATGAAA CGTGTATCCCCGGTTTGTCG
Downstream 100 bases:
>100_bases GCGCGACGCATTTTCCGCTCAAGAAGGCGCTGCTCGGCGCACGGGATATGACGCCGTCGTGTCACGCCCGCCACCTACAA TCGGCGCAGCTCAACAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Regulatory Protein MerR; Transcriptional Regulator Merr Family; Transcriptional Regulator; MerR-Family Transcriptional Regulator; Transcriptional Regulator CarH; MerR-Family Transcription Regulator Protein; Cobalamin
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFYPLDQVEKLRVIKRLLDAGHR PGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDLVRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDA WMRGHLEVFEEHLYTESMHVLLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVTALAALGAIAGETRRWRAQHG
Sequences:
>Translated_320_residues MAVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFYPLDQVEKLRVIKRLLDAGHR PGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDLVRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDA WMRGHLEVFEEHLYTESMHVLLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVTALAALGAIAGETRRWRAQHG >Mature_319_residues AVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFYPLDQVEKLRVIKRLLDAGHRP GQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDLVRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDAW MRGHLEVFEEHLYTESMHVLLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDIV LAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVTALAALGAIAGETRRWRAQHG
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34963; Mature: 34832
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFY CCCHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCC PLDQVEKLRVIKRLLDAGHRPGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDL CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH VRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDAWMRGHLEVFEEHLYTESMHV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHH VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVT HHHCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHH ALAALGAIAGETRRWRAQHG HHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure AVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFY CCHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCC PLDQVEKLRVIKRLLDAGHRPGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDL CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH VRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDAWMRGHLEVFEEHLYTESMHV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHH VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVT HHHCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHH ALAALGAIAGETRRWRAQHG HHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA