Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265431

Identifier: 124265431

GI number: 124265431

Start: 254189

End: 255151

Strand: Direct

Name: 124265431

Synonym: Mpe_A0238

Alternate gene names: NA

Gene position: 254189-255151 (Clockwise)

Preceding gene: 124265421

Following gene: 124265432

Centisome position: 6.29

GC content: 69.78

Gene sequence:

>963_bases
ATGGCCGTGCGCGAGCTGGCGCCAGCGGCGATGAGCACACGCAGCGAAACCCGTCCCATCGCCCTGTCCATCGCGGCGGT
CGAGCGCGACACGGGGCTGACGAAGGACACCTTGCGCATCTGGGAGCGCCGCTACGGCTTCCCCGTGCCGGACCGGAACG
CGCTGGCCGAGCGCTTCTATCCGCTGGATCAGGTGGAGAAGCTGCGCGTCATCAAGCGCCTGCTCGACGCCGGGCACCGG
CCTGGGCAGATCGTCGCGCAGCCGGTCGACGCCCTGCTGCGGCTCAGCGACAGCAGCGCCGCGGTCGCGGGACCGCGCGG
CGATCCCGGCCAACCCGATCTTCGCGCCTACGTCGATCTGGTGCGCGCTCATGACGTGGACGGACTGCGCCGCCAATTGG
CGCAGGCACAACTGCAGCTGGGGTTGGCGCGCTTCGTCATCGAGGTCATCTCGCCCTTGAATACGTTGATCGGCGACGCT
TGGATGCGCGGTCATCTGGAAGTCTTCGAGGAGCACCTGTACACCGAATCGATGCACGTGCTGCTGCGTCAGGCCATCAG
CACGGTGCCGGTGCCCGAGACGGGCAGCCGGCCCCGCGTGTTGCTGACCACCTTCCCGCACGAGCCGCACGGCCTGGGGC
TGCTGATGGCCGAACCGCTGTTCCTGCTGGAAGGTTGCCGCTGCCTGAGCCTGGGGGTGCAGACGCCGATCTGGGACATC
GTGCTGGCCGCCAAGTCGCAGCGCGCCGACATCGTGGCGCTGAGCTTCAGCTCGATACTCACACCGACGGCGGTCACGAC
CGGTCTCGCGGAGTTGCGGGAGAAGTTGCCGCCGTCGATCGAGATCTGGGCCGGCGGCAGTGCGCCGGTGCTGCAGCGCC
GGCCGGTGGCGGGTGTGACGGCGCTGGCCGCGCTGGGTGCGATCGCCGGGGAAACGCGGCGCTGGCGCGCGCAGCACGGT
TGA

Upstream 100 bases:

>100_bases
TTGTCCTGGTCAAACGCTGGAACTGATCTATATTACGAGCGCCCATGCCCCCGTCAAATGCTGGTCGACCCGCAATGAAA
CGTGTATCCCCGGTTTGTCG

Downstream 100 bases:

>100_bases
GCGCGACGCATTTTCCGCTCAAGAAGGCGCTGCTCGGCGCACGGGATATGACGCCGTCGTGTCACGCCCGCCACCTACAA
TCGGCGCAGCTCAACAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Regulatory Protein MerR; Transcriptional Regulator Merr Family; Transcriptional Regulator; MerR-Family Transcriptional Regulator; Transcriptional Regulator CarH; MerR-Family Transcription Regulator Protein; Cobalamin

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFYPLDQVEKLRVIKRLLDAGHR
PGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDLVRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDA
WMRGHLEVFEEHLYTESMHVLLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI
VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVTALAALGAIAGETRRWRAQHG

Sequences:

>Translated_320_residues
MAVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFYPLDQVEKLRVIKRLLDAGHR
PGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDLVRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDA
WMRGHLEVFEEHLYTESMHVLLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI
VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVTALAALGAIAGETRRWRAQHG
>Mature_319_residues
AVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFYPLDQVEKLRVIKRLLDAGHRP
GQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDLVRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDAW
MRGHLEVFEEHLYTESMHVLLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDIV
LAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVTALAALGAIAGETRRWRAQHG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34963; Mature: 34832

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFY
CCCHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCC
PLDQVEKLRVIKRLLDAGHRPGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDL
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH
VRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDAWMRGHLEVFEEHLYTESMHV
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHH
VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVT
HHHCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHH
ALAALGAIAGETRRWRAQHG
HHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
AVRELAPAAMSTRSETRPIALSIAAVERDTGLTKDTLRIWERRYGFPVPDRNALAERFY
CCHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCC
PLDQVEKLRVIKRLLDAGHRPGQIVAQPVDALLRLSDSSAAVAGPRGDPGQPDLRAYVDL
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH
VRAHDVDGLRRQLAQAQLQLGLARFVIEVISPLNTLIGDAWMRGHLEVFEEHLYTESMHV
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRQAISTVPVPETGSRPRVLLTTFPHEPHGLGLLMAEPLFLLEGCRCLSLGVQTPIWDI
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCHHHH
VLAAKSQRADIVALSFSSILTPTAVTTGLAELREKLPPSIEIWAGGSAPVLQRRPVAGVT
HHHCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHH
ALAALGAIAGETRRWRAQHG
HHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA