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The map label for this gene is ygaD [C]

Identifier: 124265405

GI number: 124265405

Start: 229125

End: 229631

Strand: Direct

Name: ygaD [C]

Synonym: Mpe_A0212

Alternate gene names: 124265405

Gene position: 229125-229631 (Clockwise)

Preceding gene: 124265404

Following gene: 124265406

Centisome position: 5.67

GC content: 75.15

Gene sequence:

>507_bases
ATGAGCACGCGCCTGCTCGATCTCGCCGACCTGGAGCCGCTGGTGCTGCAGCTGGCTGCCGCACTGCGGGCGCGGCACTG
GCGCGTGGCCACGGCCGAGAGCTGTACCGGCGGGCTGGTGGCCGCTGCGTGCACGGCCGTGGCCGGCTCCAGCGATTGGT
TCGAAAGGGGCTTCGTCACCTACAGCAACGAGGCCAAGGTTCAGTCGCTCGGTGTGGCGGCCACGCTGATCGAGCGACAC
GGCGCGGTGAGCCGCGAGGTCGCGCTGGCGATGGCCGAGGGGGTGCTTCGGCAGGCGCCGGCCGACCTGGCGCTGAGCGT
GACCGGCATCGCCGGCCCCGGCGGCGCGGTGCCGGGCAAGCCGGTCGGCACGGTCTGGCTCGGTCTGACGGTGCGCGGCC
AGGCGCCGCGGGCCGAGTTGCTGCAGCTGTCGGGCGATCGCGCCGGCATCCGCGCGCAGACCGTGCTGCGGGCGCTGCAG
CGCCTGCTGGAGGCCGCGCGGCCGTGA

Upstream 100 bases:

>100_bases
GGCTGGGCGCAGGGCTTCGGCATCCTGTTCGATGACGGCGTGGCCGCGTTATGCACGCTGCTGGTGATCGCGCTGTGGCG
CTTCCTGGTCTGAGCGTCCG

Downstream 100 bases:

>100_bases
GCCTGCTGCTGGCCTGCGATGTCGGTGCCGACGAAGCCGAGACCTGGCGCGCGGCGCTGTCCGCCGCGCTGTCCGGCGAA
CACCTGCTGACATCGAGCCA

Product: competence/damage inducible protein CinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSTRLLDLADLEPLVLQLAAALRARHWRVATAESCTGGLVAAACTAVAGSSDWFERGFVTYSNEAKVQSLGVAATLIERH
GAVSREVALAMAEGVLRQAPADLALSVTGIAGPGGAVPGKPVGTVWLGLTVRGQAPRAELLQLSGDRAGIRAQTVLRALQ
RLLEAARP

Sequences:

>Translated_168_residues
MSTRLLDLADLEPLVLQLAAALRARHWRVATAESCTGGLVAAACTAVAGSSDWFERGFVTYSNEAKVQSLGVAATLIERH
GAVSREVALAMAEGVLRQAPADLALSVTGIAGPGGAVPGKPVGTVWLGLTVRGQAPRAELLQLSGDRAGIRAQTVLRALQ
RLLEAARP
>Mature_167_residues
STRLLDLADLEPLVLQLAAALRARHWRVATAESCTGGLVAAACTAVAGSSDWFERGFVTYSNEAKVQSLGVAATLIERHG
AVSREVALAMAEGVLRQAPADLALSVTGIAGPGGAVPGKPVGTVWLGLTVRGQAPRAELLQLSGDRAGIRAQTVLRALQR
LLEAARP

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=158, Percent_Identity=52.5316455696203, Blast_Score=142, Evalue=9e-36,
Organism=Escherichia coli, GI1787818, Length=143, Percent_Identity=39.1608391608392, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17414; Mature: 17283

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRLLDLADLEPLVLQLAAALRARHWRVATAESCTGGLVAAACTAVAGSSDWFERGFVT
CCCCCCCHHCCCHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCHHHCCCEE
YSNEAKVQSLGVAATLIERHGAVSREVALAMAEGVLRQAPADLALSVTGIAGPGGAVPGK
ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
PVGTVWLGLTVRGQAPRAELLQLSGDRAGIRAQTVLRALQRLLEAARP
CCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STRLLDLADLEPLVLQLAAALRARHWRVATAESCTGGLVAAACTAVAGSSDWFERGFVT
CCCCCCHHCCCHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCHHHCCCEE
YSNEAKVQSLGVAATLIERHGAVSREVALAMAEGVLRQAPADLALSVTGIAGPGGAVPGK
ECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
PVGTVWLGLTVRGQAPRAELLQLSGDRAGIRAQTVLRALQRLLEAARP
CCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA