Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is lysN [H]
Identifier: 124265379
GI number: 124265379
Start: 202886
End: 204094
Strand: Direct
Name: lysN [H]
Synonym: Mpe_A0186
Alternate gene names: 124265379
Gene position: 202886-204094 (Clockwise)
Preceding gene: 124265378
Following gene: 124265380
Centisome position: 5.02
GC content: 74.52
Gene sequence:
>1209_bases ATGACCTGGACCCTGGCGCGGCGCACCGAGCGCATGAATCCTTCCGCGATCCGCGAGATCCTGAAACTGGCCGAACGGCC CGGCGTGCTGTCACTGGCCGGCGGCCTGCCGTCGCCGGACGGCTTCCCGGTCGAGGCGCTGCGCGAGGCCAGCGCCCGGG TGCTGCGCGACACCCCACGGGAGGCGCTGCAGTACGCCGCGAGCGAAGGCTACGGGCCGCTGCGCGAGTGGGTCGCGGCC CGGCTCGCCAACGACGGCGTCGTGGTCGAACCCGGGCAGGTGCTGGTCACCACCGGCTCGCAACAGGGGCTGGACCTGGT CGGCAAGCTGCTGATCGATGCCGGCAGCGCGGTCGCGGTGGAGACGCCCACCTACCTGGGCGCGCTGCAGGCCTTCGCGC CCTGCGAGCCGGCGTTCGCCGCGCTCGCCTCCGACGACGAGGGTCCGAAGCCCGAGGCCCTGGCCGGCGCCGCGGGCGCG CGCTTCGCGTACCTGCTGCCGAACTTCCAGAACCCGACCGGGCGGGTGATCTCGGAGGCCCGTCGCGAGGCCCTGGTGGC GGCGGCGCAGGCGGCTGCGCTGCCGCTGGTCGAGGACAACCCCTATGGCGAGCTGTGGTTCGACGCCCCGCCACCGGCGC CGCTGGCCGCGCGCTGGCCGCAGGGCACGATCTACCTCGGCTCGTTCTCGAAGATCCTCGCGCCCGGCCTGCGGCTGGGG TATGTGGTGGCGCCGCCGGCGCTGTATCCGAAGCTGCTGCAGGTCAAGCAGGCGGCCGACCTGCACACGCCGGGCTTCAA CCAGCGCATCGTCCACGAGGTCGTGCGAGACGGCCTGCTCGATCGCCATGTGCCGACCGTGCGCGCGCGCCATGCCGCGC AACGCGACGCGATGGCGGCGGCGCTGCGCGCGCACCTGCCCGCCGGCGCCGAATGGCAGCCACCGCGCGGCGGCATGTTC TTCTGGCTGCGGCTGCCGCCGGGGCTGGACGCGACGGCGCTGCTGCCGCGCGCTATCGCCGCCGGCGTGGCCTACGTGCC GGGTGCGCCCTTCCATGCCGGCGAAGCCGACCCGCGCACGCTGCGGCTGAGCTTCGTCACGCTGACGCCAGCGCAGCTGC ACACTGCGATCGCCACGCTCGGGCGCGTGGTGCACGAGGCACTGGCCGAGCAGGCCGGGTCGGCGCTCTCGCTGAGGAGA GCCGCATGA
Upstream 100 bases:
>100_bases ATCCCGCCGCGCTGCCGCTGCCCGGCTTCGACAGCACGTGGCTGCATGTGCAGCAGGCGCTGGACTGGATGCTCGACGAC ACCCCTCGAGGAGACCCCCG
Downstream 100 bases:
>100_bases GCGCGAACCCCGCTCGCCGCTTCTCGCAGGTCGACGTGTTCACCGCCGAGCCGTTGCGCGGCAACGCCGTCGCGGTGGTG TTCGACGCCGAGGGCCTGGA
Product: valine-pyruvate aminotransferase
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTWTLARRTERMNPSAIREILKLAERPGVLSLAGGLPSPDGFPVEALREASARVLRDTPREALQYAASEGYGPLREWVAA RLANDGVVVEPGQVLVTTGSQQGLDLVGKLLIDAGSAVAVETPTYLGALQAFAPCEPAFAALASDDEGPKPEALAGAAGA RFAYLLPNFQNPTGRVISEARREALVAAAQAAALPLVEDNPYGELWFDAPPPAPLAARWPQGTIYLGSFSKILAPGLRLG YVVAPPALYPKLLQVKQAADLHTPGFNQRIVHEVVRDGLLDRHVPTVRARHAAQRDAMAAALRAHLPAGAEWQPPRGGMF FWLRLPPGLDATALLPRAIAAGVAYVPGAPFHAGEADPRTLRLSFVTLTPAQLHTAIATLGRVVHEALAEQAGSALSLRR AA
Sequences:
>Translated_402_residues MTWTLARRTERMNPSAIREILKLAERPGVLSLAGGLPSPDGFPVEALREASARVLRDTPREALQYAASEGYGPLREWVAA RLANDGVVVEPGQVLVTTGSQQGLDLVGKLLIDAGSAVAVETPTYLGALQAFAPCEPAFAALASDDEGPKPEALAGAAGA RFAYLLPNFQNPTGRVISEARREALVAAAQAAALPLVEDNPYGELWFDAPPPAPLAARWPQGTIYLGSFSKILAPGLRLG YVVAPPALYPKLLQVKQAADLHTPGFNQRIVHEVVRDGLLDRHVPTVRARHAAQRDAMAAALRAHLPAGAEWQPPRGGMF FWLRLPPGLDATALLPRAIAAGVAYVPGAPFHAGEADPRTLRLSFVTLTPAQLHTAIATLGRVVHEALAEQAGSALSLRR AA >Mature_401_residues TWTLARRTERMNPSAIREILKLAERPGVLSLAGGLPSPDGFPVEALREASARVLRDTPREALQYAASEGYGPLREWVAAR LANDGVVVEPGQVLVTTGSQQGLDLVGKLLIDAGSAVAVETPTYLGALQAFAPCEPAFAALASDDEGPKPEALAGAAGAR FAYLLPNFQNPTGRVISEARREALVAAAQAAALPLVEDNPYGELWFDAPPPAPLAARWPQGTIYLGSFSKILAPGLRLGY VVAPPALYPKLLQVKQAADLHTPGFNQRIVHEVVRDGLLDRHVPTVRARHAAQRDAMAAALRAHLPAGAEWQPPRGGMFF WLRLPPGLDATALLPRAIAAGVAYVPGAPFHAGEADPRTLRLSFVTLTPAQLHTAIATLGRVVHEALAEQAGSALSLRRA A
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=412, Percent_Identity=31.0679611650485, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI33469970, Length=412, Percent_Identity=31.0679611650485, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI95147551, Length=338, Percent_Identity=26.3313609467456, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI169881279, Length=338, Percent_Identity=26.3313609467456, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1787710, Length=380, Percent_Identity=28.6842105263158, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1790797, Length=393, Percent_Identity=25.6997455470738, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI48994949, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6321000, Length=373, Percent_Identity=24.9329758713137, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI21356535, Length=399, Percent_Identity=25.31328320802, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 42586; Mature: 42455
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWTLARRTERMNPSAIREILKLAERPGVLSLAGGLPSPDGFPVEALREASARVLRDTPR CCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHH EALQYAASEGYGPLREWVAARLANDGVVVEPGQVLVTTGSQQGLDLVGKLLIDAGSAVAV HHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEE ETPTYLGALQAFAPCEPAFAALASDDEGPKPEALAGAAGARFAYLLPNFQNPTGRVISEA ECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHH RREALVAAAQAAALPLVEDNPYGELWFDAPPPAPLAARWPQGTIYLGSFSKILAPGLRLG HHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCC YVVAPPALYPKLLQVKQAADLHTPGFNQRIVHEVVRDGLLDRHVPTVRARHAAQRDAMAA EEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHH ALRAHLPAGAEWQPPRGGMFFWLRLPPGLDATALLPRAIAAGVAYVPGAPFHAGEADPRT HHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCE LRLSFVTLTPAQLHTAIATLGRVVHEALAEQAGSALSLRRAA EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure TWTLARRTERMNPSAIREILKLAERPGVLSLAGGLPSPDGFPVEALREASARVLRDTPR CCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHH EALQYAASEGYGPLREWVAARLANDGVVVEPGQVLVTTGSQQGLDLVGKLLIDAGSAVAV HHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEE ETPTYLGALQAFAPCEPAFAALASDDEGPKPEALAGAAGARFAYLLPNFQNPTGRVISEA ECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHH RREALVAAAQAAALPLVEDNPYGELWFDAPPPAPLAARWPQGTIYLGSFSKILAPGLRLG HHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCC YVVAPPALYPKLLQVKQAADLHTPGFNQRIVHEVVRDGLLDRHVPTVRARHAAQRDAMAA EEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHH ALRAHLPAGAEWQPPRGGMFFWLRLPPGLDATALLPRAIAAGVAYVPGAPFHAGEADPRT HHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCE LRLSFVTLTPAQLHTAIATLGRVVHEALAEQAGSALSLRRAA EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA