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The map label for this gene is yddE [C]

Identifier: 124265380

GI number: 124265380

Start: 204091

End: 204933

Strand: Direct

Name: yddE [C]

Synonym: Mpe_A0187

Alternate gene names: 124265380

Gene position: 204091-204933 (Clockwise)

Preceding gene: 124265379

Following gene: 124265381

Centisome position: 5.05

GC content: 74.02

Gene sequence:

>843_bases
ATGAGCGCGAACCCCGCTCGCCGCTTCTCGCAGGTCGACGTGTTCACCGCCGAGCCGTTGCGCGGCAACGCCGTCGCGGT
GGTGTTCGACGCCGAGGGCCTGGACGACGCGCAGATGCAGGCCTTCGCGCGCTGGACCCAGCTCAGCGAGACCACCTTCC
TGCTGCCACCCACCGATCCGTCCGCCGACTACCGCCTGCGCATCTTCACCCCGGCCGAGGAACTGCCGTTCGCCGGCCAT
CCCACGCTCGGCAGTTGCCACGCCTGGCTCGAGGCGGGCGGCCGGCCACGCACGGACGAGGTGGTGCAGGAATGCGGTGT
CGGACTCGTGCGGATACGACGTGACGGCCGCCGGCTGGCGTTCGCCGCGCCGCCGCTGCGCCGCAGCGGCGCCGTCGACG
AGGCCACGCGGGCGCAGATCGCCCGCGCCCTGCGCGTCGACGCGAGCGAACTGCTGGCGACGCAATGGGTCGACAACGGA
CCGGGCTGGGTGGCCGCGCTGCTGCCCAGCGCCGCGGCCGTGCTGGCGCTCGAGCCCGATTACGTCGCGATGCAGCCGCT
CAACCTCGGCGTGATCGGGGCGCAGACGCCGGGTCACGACACCGCCTTCGAGGTGCGCGCCTTCGTGCCCTCGCTCGGCG
TGCCCGAGGACCCGGTGACCGGCAGCCTGAACGCCGGTCTGGCGCAGTGGCTGATCGGCGCCGGGCTGGCGCCGGCGCGC
TACGTCGCGAGCCAAGGGGGCCGGCTCGGGCGCGCGGGGCGGGTGCACGTGGATCAGGTCGGTGCGGACCTCTGGGTCGG
CGGCGACTCGGTGACCTGCATCGTCGGCAGCTTGCGGCTGTGA

Upstream 100 bases:

>100_bases
CGCCAGCGCAGCTGCACACTGCGATCGCCACGCTCGGGCGCGTGGTGCACGAGGCACTGGCCGAGCAGGCCGGGTCGGCG
CTCTCGCTGAGGAGAGCCGC

Downstream 100 bases:

>100_bases
GCCGCACGACGTGGGCGGCGCGGTGTAAATTCGCCGGGCGATGACCAGTCCCGGCATTGAACTGCTTACACCGGCCACGC
CGGAACTGCTGGAGGCCACC

Product: PhzF family phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSANPARRFSQVDVFTAEPLRGNAVAVVFDAEGLDDAQMQAFARWTQLSETTFLLPPTDPSADYRLRIFTPAEELPFAGH
PTLGSCHAWLEAGGRPRTDEVVQECGVGLVRIRRDGRRLAFAAPPLRRSGAVDEATRAQIARALRVDASELLATQWVDNG
PGWVAALLPSAAAVLALEPDYVAMQPLNLGVIGAQTPGHDTAFEVRAFVPSLGVPEDPVTGSLNAGLAQWLIGAGLAPAR
YVASQGGRLGRAGRVHVDQVGADLWVGGDSVTCIVGSLRL

Sequences:

>Translated_280_residues
MSANPARRFSQVDVFTAEPLRGNAVAVVFDAEGLDDAQMQAFARWTQLSETTFLLPPTDPSADYRLRIFTPAEELPFAGH
PTLGSCHAWLEAGGRPRTDEVVQECGVGLVRIRRDGRRLAFAAPPLRRSGAVDEATRAQIARALRVDASELLATQWVDNG
PGWVAALLPSAAAVLALEPDYVAMQPLNLGVIGAQTPGHDTAFEVRAFVPSLGVPEDPVTGSLNAGLAQWLIGAGLAPAR
YVASQGGRLGRAGRVHVDQVGADLWVGGDSVTCIVGSLRL
>Mature_279_residues
SANPARRFSQVDVFTAEPLRGNAVAVVFDAEGLDDAQMQAFARWTQLSETTFLLPPTDPSADYRLRIFTPAEELPFAGHP
TLGSCHAWLEAGGRPRTDEVVQECGVGLVRIRRDGRRLAFAAPPLRRSGAVDEATRAQIARALRVDASELLATQWVDNGP
GWVAALLPSAAAVLALEPDYVAMQPLNLGVIGAQTPGHDTAFEVRAFVPSLGVPEDPVTGSLNAGLAQWLIGAGLAPARY
VASQGGRLGRAGRVHVDQVGADLWVGGDSVTCIVGSLRL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=274, Percent_Identity=33.9416058394161, Blast_Score=107, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6321818, Length=298, Percent_Identity=34.2281879194631, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 29663; Mature: 29532

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANPARRFSQVDVFTAEPLRGNAVAVVFDAEGLDDAQMQAFARWTQLSETTFLLPPTDP
CCCCHHHHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCC
SADYRLRIFTPAEELPFAGHPTLGSCHAWLEAGGRPRTDEVVQECGVGLVRIRRDGRRLA
CCCEEEEEECCHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCEEE
FAAPPLRRSGAVDEATRAQIARALRVDASELLATQWVDNGPGWVAALLPSAAAVLALEPD
EECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCC
YVAMQPLNLGVIGAQTPGHDTAFEVRAFVPSLGVPEDPVTGSLNAGLAQWLIGAGLAPAR
EEEECCCCEEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
YVASQGGRLGRAGRVHVDQVGADLWVGGDSVTCIVGSLRL
HHHHCCCCCCCCCCEEHHHCCCEEEECCCCEEEEEEEECC
>Mature Secondary Structure 
SANPARRFSQVDVFTAEPLRGNAVAVVFDAEGLDDAQMQAFARWTQLSETTFLLPPTDP
CCCHHHHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCC
SADYRLRIFTPAEELPFAGHPTLGSCHAWLEAGGRPRTDEVVQECGVGLVRIRRDGRRLA
CCCEEEEEECCHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCEEE
FAAPPLRRSGAVDEATRAQIARALRVDASELLATQWVDNGPGWVAALLPSAAAVLALEPD
EECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCC
YVAMQPLNLGVIGAQTPGHDTAFEVRAFVPSLGVPEDPVTGSLNAGLAQWLIGAGLAPAR
EEEECCCCEEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
YVASQGGRLGRAGRVHVDQVGADLWVGGDSVTCIVGSLRL
HHHHCCCCCCCCCCEEHHHCCCEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]