Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265355
Identifier: 124265355
GI number: 124265355
Start: 170826
End: 171563
Strand: Direct
Name: 124265355
Synonym: Mpe_A0162
Alternate gene names: NA
Gene position: 170826-171563 (Clockwise)
Preceding gene: 124265354
Following gene: 124265356
Centisome position: 4.22
GC content: 76.15
Gene sequence:
>738_bases GTGAGCCTCGACGATCCGCACGAGCGCAGCGCCACCGCCGGCGAGTACGTGCTGGGCACGCTGGGCGCGTCCGAGCGTGC CGAGTTCCAGCGTGCGCTGGGGGAGGACGCGGCGCTCCAGGCCGAGGTCTACGCGTGGCAGGACCGCCTTCTCGGTCTCG CGGGCCGCGTCGCGCCGGCCGAGCCGTCGGCCGGCCTGTGGCCGGCCATCGAAGCCCGCTTGCGCTCCGGTCCGGCCACG GCGGCGGAGATTCCGACGCGTGCTGCGGCCCTGCCGGCTGCCAACGACCCGGCCTGGCGCCGCCTGCGGCGCTGGCAATG GACCAGCGGCCTGGCGATCGCCGCCTCACTGGTGCTGGCCACGCTGCTGGTGCTGCGCGCGCCGGCGCCGGCCGACGCGC CTCGCTACCTGGCGGTGCTGCAGGCCCCGGGCAGCAACACCACCGGCTGGGTCGTCGAGGCCACCGCTGGCGGGCAGTTG CGGCTGGTGCCGGTCGGCACGACCGAGGCCGTGCCGCCGGGCAAGGCGCTGCAGTTCTGGACCAAGGCCGAAGGCGCTGC CGGGCCCACCTCGCTCGGGCTGGTGCGGGCCGGGCAGGTCACCGAACTGCCGGTCGCGACGCTGCCGACGCTGGAGGCGA GGCAGTTGTTCGAGCTCACGCTGGAGCCCGAGACCGGCTCGCCGATCGGCCGGCCGACCGGGCCGATCCTGTTCGTCGGC CGCTCGGTGCGCCTGTAG
Upstream 100 bases:
>100_bases GCTACACCCACGAGCAGATCGCGCAGCAGACCGCCACGCCGGTCGGCACCGTCAAATCGTGGATCCGTCGCGGTCTGCTG TCGCTGAAGGAGTGCCTGTC
Downstream 100 bases:
>100_bases CAGCAGGCGCCGCCCTGACCGCCTGGAGACGCCTTCTTGAGCCCGCACGACCCGCCCTTCCGTCCTGTTCACGCCTGCGG GCTGCATCGTGCGCTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Like Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSLDDPHERSATAGEYVLGTLGASERAEFQRALGEDAALQAEVYAWQDRLLGLAGRVAPAEPSAGLWPAIEARLRSGPAT AAEIPTRAAALPAANDPAWRRLRRWQWTSGLAIAASLVLATLLVLRAPAPADAPRYLAVLQAPGSNTTGWVVEATAGGQL RLVPVGTTEAVPPGKALQFWTKAEGAAGPTSLGLVRAGQVTELPVATLPTLEARQLFELTLEPETGSPIGRPTGPILFVG RSVRL
Sequences:
>Translated_245_residues MSLDDPHERSATAGEYVLGTLGASERAEFQRALGEDAALQAEVYAWQDRLLGLAGRVAPAEPSAGLWPAIEARLRSGPAT AAEIPTRAAALPAANDPAWRRLRRWQWTSGLAIAASLVLATLLVLRAPAPADAPRYLAVLQAPGSNTTGWVVEATAGGQL RLVPVGTTEAVPPGKALQFWTKAEGAAGPTSLGLVRAGQVTELPVATLPTLEARQLFELTLEPETGSPIGRPTGPILFVG RSVRL >Mature_244_residues SLDDPHERSATAGEYVLGTLGASERAEFQRALGEDAALQAEVYAWQDRLLGLAGRVAPAEPSAGLWPAIEARLRSGPATA AEIPTRAAALPAANDPAWRRLRRWQWTSGLAIAASLVLATLLVLRAPAPADAPRYLAVLQAPGSNTTGWVVEATAGGQLR LVPVGTTEAVPPGKALQFWTKAEGAAGPTSLGLVRAGQVTELPVATLPTLEARQLFELTLEPETGSPIGRPTGPILFVGR SVRL
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25657; Mature: 25525
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDDPHERSATAGEYVLGTLGASERAEFQRALGEDAALQAEVYAWQDRLLGLAGRVAPA CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC EPSAGLWPAIEARLRSGPATAAEIPTRAAALPAANDPAWRRLRRWQWTSGLAIAASLVLA CCCCCCCHHHHHHHHCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH TLLVLRAPAPADAPRYLAVLQAPGSNTTGWVVEATAGGQLRLVPVGTTEAVPPGKALQFW HHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHEEE TKAEGAAGPTSLGLVRAGQVTELPVATLPTLEARQLFELTLEPETGSPIGRPTGPILFVG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHCEEEEEEECCCCCCCCCCCCCCEEEEC RSVRL CCCCC >Mature Secondary Structure SLDDPHERSATAGEYVLGTLGASERAEFQRALGEDAALQAEVYAWQDRLLGLAGRVAPA CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC EPSAGLWPAIEARLRSGPATAAEIPTRAAALPAANDPAWRRLRRWQWTSGLAIAASLVLA CCCCCCCHHHHHHHHCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH TLLVLRAPAPADAPRYLAVLQAPGSNTTGWVVEATAGGQLRLVPVGTTEAVPPGKALQFW HHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHEEE TKAEGAAGPTSLGLVRAGQVTELPVATLPTLEARQLFELTLEPETGSPIGRPTGPILFVG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHCEEEEEEECCCCCCCCCCCCCCEEEEC RSVRL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA