Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is cysP [H]
Identifier: 124265315
GI number: 124265315
Start: 124475
End: 125488
Strand: Direct
Name: cysP [H]
Synonym: Mpe_A0122
Alternate gene names: 124265315
Gene position: 124475-125488 (Clockwise)
Preceding gene: 124265314
Following gene: 124265316
Centisome position: 3.08
GC content: 65.09
Gene sequence:
>1014_bases ATGACCCGTTTCGCTTCCGTCCGTGGCGCGCTCGCCGCCTCGATCCTTGTTTTGGCCGCCGGTGCCGCCGCCGCCAAGGA CGTGACCCTGCTCAATGTCTCCTACGACCCGACGCGCGAGCTCTACGTCGAGTACAACGCCGCCTTCGCCAAGTACTGGA AGGGCAAGACCGGCGACAACGTGACCGTGAAGCAGTCGCACGGCGGCTCGGGCAAGCAGGCTCGCTCGGTGATCGACGGC ATCGACGCCGACGTGGTGACGCTGGCGCTGGCCTACGACATCGACGAGATCGGCGAGAAGGCCAAGCTGCTGCCGGCCGA CTGGCAGAAGCGCCTGAAGCACAACAGCTCGCCCTACACCTCCACCTACATCTTCCTGGTGCGCAAGGGCAACCCGAAGG GCATCAAGAACTGGGACGACCTGGTGAAGCCGGGCGTGTCGGTGATCACCGCGAACCCCAAGACCTCGGGTGGCGCCCGC TGGGGCTACCTGGCGGCCTACGGCTTCGCGCTCAAGCAGCCCGGAGGCGACGATGCCAAGGCGCGCGAGTTCGTCGGCAA CCTGTTCAAGAACGTGCCGGTGCTGGATTCCGGCGCCCGCGGCTCCACGGTGACCTTCGCCGAGCGTGGTATCGGTGACG TGCTGCTGGCCTGGGAGAACGAGGCTCACCTTTCGCTGAAGGAGTTCGGCGTCGACAAGTTCGACATCGTCTACCCGCCG CTGAGCATCCTGGCCGAGCCGCCGGTGACGGTGGTCGACAAGGTGGTCGACAAGAAGGGCACCCGCGACGTGGCCCAGGC CTACCTCGAGTACCTGTACACCGCGGAGGGCCAGGAAATCGCCGCGCGCAACTTCTACCGGCCGATCGACGAGAAGGTCG CGGCGAAGTACGCGAAGAACTTCCCGAAGGTCAACCTGTTCACCATCGACGAGGTGTTCGGCGGGTGGGCCAAGGCGCAG AAGACCCACTTCGCCGACGGCGGTGTGTTCGATCAGATCTATACGAAGAAGTAA
Upstream 100 bases:
>100_bases TAAGCGTCCTTGCTTTCATTCGTTCCGCGTTGAAGCGGCGCTTTCTAGCATCTCCCCATTCGCTCATTCCCGCCCTGATT CCGTGATCCCGAGGACCTTC
Downstream 100 bases:
>100_bases GCACCGGGATTTTTTCGAGAGCAGGCGCCCACTTGCTGGGCGCCTGTCGGCGTTTGGCTACGCCATTTTTCTCATAAGCA TTCGACGAATCTGTCGTTCC
Product: thiosulfate binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTRFASVRGALAASILVLAAGAAAAKDVTLLNVSYDPTRELYVEYNAAFAKYWKGKTGDNVTVKQSHGGSGKQARSVIDG IDADVVTLALAYDIDEIGEKAKLLPADWQKRLKHNSSPYTSTYIFLVRKGNPKGIKNWDDLVKPGVSVITANPKTSGGAR WGYLAAYGFALKQPGGDDAKAREFVGNLFKNVPVLDSGARGSTVTFAERGIGDVLLAWENEAHLSLKEFGVDKFDIVYPP LSILAEPPVTVVDKVVDKKGTRDVAQAYLEYLYTAEGQEIAARNFYRPIDEKVAAKYAKNFPKVNLFTIDEVFGGWAKAQ KTHFADGGVFDQIYTKK
Sequences:
>Translated_337_residues MTRFASVRGALAASILVLAAGAAAAKDVTLLNVSYDPTRELYVEYNAAFAKYWKGKTGDNVTVKQSHGGSGKQARSVIDG IDADVVTLALAYDIDEIGEKAKLLPADWQKRLKHNSSPYTSTYIFLVRKGNPKGIKNWDDLVKPGVSVITANPKTSGGAR WGYLAAYGFALKQPGGDDAKAREFVGNLFKNVPVLDSGARGSTVTFAERGIGDVLLAWENEAHLSLKEFGVDKFDIVYPP LSILAEPPVTVVDKVVDKKGTRDVAQAYLEYLYTAEGQEIAARNFYRPIDEKVAAKYAKNFPKVNLFTIDEVFGGWAKAQ KTHFADGGVFDQIYTKK >Mature_336_residues TRFASVRGALAASILVLAAGAAAAKDVTLLNVSYDPTRELYVEYNAAFAKYWKGKTGDNVTVKQSHGGSGKQARSVIDGI DADVVTLALAYDIDEIGEKAKLLPADWQKRLKHNSSPYTSTYIFLVRKGNPKGIKNWDDLVKPGVSVITANPKTSGGARW GYLAAYGFALKQPGGDDAKAREFVGNLFKNVPVLDSGARGSTVTFAERGIGDVLLAWENEAHLSLKEFGVDKFDIVYPPL SILAEPPVTVVDKVVDKKGTRDVAQAYLEYLYTAEGQEIAARNFYRPIDEKVAAKYAKNFPKVNLFTIDEVFGGWAKAQK THFADGGVFDQIYTKK
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=318, Percent_Identity=68.8679245283019, Blast_Score=453, Evalue=1e-129, Organism=Escherichia coli, GI1788765, Length=305, Percent_Identity=48.1967213114754, Blast_Score=293, Evalue=8e-81,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36740; Mature: 36609
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00401 PROK_SULFATE_BIND_1 ; PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFASVRGALAASILVLAAGAAAAKDVTLLNVSYDPTRELYVEYNAAFAKYWKGKTGDN CCCHHHHHHHHHHHHHHHHCCCCHHCCEEEEEECCCCCEEEEEEECHHHHHHHCCCCCCC VTVKQSHGGSGKQARSVIDGIDADVVTLALAYDIDEIGEKAKLLPADWQKRLKHNSSPYT EEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCCCCCCC STYIFLVRKGNPKGIKNWDDLVKPGVSVITANPKTSGGARWGYLAAYGFALKQPGGDDAK EEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHH AREFVGNLFKNVPVLDSGARGSTVTFAERGIGDVLLAWENEAHLSLKEFGVDKFDIVYPP HHHHHHHHHHCCCCCCCCCCCCEEEEHHCCCCEEEEEECCCCCEEHHHHCCCCEEEECCC LSILAEPPVTVVDKVVDKKGTRDVAQAYLEYLYTAEGQEIAARNFYRPIDEKVAAKYAKN HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHC FPKVNLFTIDEVFGGWAKAQKTHFADGGVFDQIYTKK CCCEEEEEHHHHHCCHHHHHHCCCCCCCCHHHHHCCC >Mature Secondary Structure TRFASVRGALAASILVLAAGAAAAKDVTLLNVSYDPTRELYVEYNAAFAKYWKGKTGDN CCHHHHHHHHHHHHHHHHCCCCHHCCEEEEEECCCCCEEEEEEECHHHHHHHCCCCCCC VTVKQSHGGSGKQARSVIDGIDADVVTLALAYDIDEIGEKAKLLPADWQKRLKHNSSPYT EEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCCCCCCC STYIFLVRKGNPKGIKNWDDLVKPGVSVITANPKTSGGARWGYLAAYGFALKQPGGDDAK EEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHH AREFVGNLFKNVPVLDSGARGSTVTFAERGIGDVLLAWENEAHLSLKEFGVDKFDIVYPP HHHHHHHHHHCCCCCCCCCCCCEEEEHHCCCCEEEEEECCCCCEEHHHHCCCCEEEECCC LSILAEPPVTVVDKVVDKKGTRDVAQAYLEYLYTAEGQEIAARNFYRPIDEKVAAKYAKN HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHC FPKVNLFTIDEVFGGWAKAQKTHFADGGVFDQIYTKK CCCEEEEEHHHHHCCHHHHHHCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]